RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
TRAPPC12-204ENST00000415624 USP21Q9UK80 565 aa15.16■□□□□ 0.02
TRAPPC12-204ENST00000415624 TRPC5Q9UL62 973 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC12-204ENST00000415624 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
TRAPPC12-204ENST00000415624 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
TRAPPC12-204ENST00000415624 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
TRAPPC12-204ENST00000415624 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
TRAPPC12-204ENST00000415624 DEFB132Q7Z7B7 95 aa15.13■□□□□ 0.01
TRAPPC12-204ENST00000415624 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
TRAPPC12-204ENST00000415624 ATRNO75882 1429 aa15.12■□□□□ 0.01
TRAPPC12-204ENST00000415624 FNBP4Q8N3X1 1017 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-204ENST00000415624 ANKRD36BQ8N2N9 1353 aa15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 SLC12A5Q9H2X9 1139 aa15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 CCDC61Q9Y6R9 512 aa15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC12-204ENST00000415624 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
TRAPPC12-204ENST00000415624 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
TRAPPC12-204ENST00000415624 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
TRAPPC12-204ENST00000415624 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
TRAPPC12-204ENST00000415624 PHF8Q9UPP1 1060 aa15.09■□□□□ 0.01
TRAPPC12-204ENST00000415624 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC12-204ENST00000415624 USP6P35125 1406 aa15.08■□□□□ 0
TRAPPC12-204ENST00000415624 CPSF1Q10570 1443 aaKnown RBP15.08■□□□□ 0
TRAPPC12-204ENST00000415624 PIK3C2AO00443 1686 aa15.07■□□□□ 0
TRAPPC12-204ENST00000415624 PSDA5PKW4 1024 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-204ENST00000415624 HDGFL2Q7Z4V5 671 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-204ENST00000415624 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
TRAPPC12-204ENST00000415624 PANK3Q9H999 370 aa15.07■□□□□ 0
TRAPPC12-204ENST00000415624 ACEP12821 1306 aa15.07■□□□□ 0
TRAPPC12-204ENST00000415624 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
TRAPPC12-204ENST00000415624 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
TRAPPC12-204ENST00000415624 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
TRAPPC12-204ENST00000415624 TERF2IPQ9NYB0 399 aa15.05■□□□□ -0
TRAPPC12-204ENST00000415624 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ -0
TRAPPC12-204ENST00000415624 ALS2Q96Q42 1657 aa15.05■□□□□ -0
TRAPPC12-204ENST00000415624 MARF1Q9Y4F3 1742 aaKnown RBP15.05■□□□□ -0
TRAPPC12-204ENST00000415624 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
TRAPPC12-204ENST00000415624 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
TRAPPC12-204ENST00000415624 YY1P25490 414 aa15.04■□□□□ -0
TRAPPC12-204ENST00000415624 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
TRAPPC12-204ENST00000415624 PXDNQ92626 1479 aa15.03■□□□□ -0
TRAPPC12-204ENST00000415624 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
TRAPPC12-204ENST00000415624 FOXO3O43524 673 aa15.02■□□□□ -0
TRAPPC12-204ENST00000415624 USP54Q70EL1 1684 aa15.02□□□□□ -0.01
TRAPPC12-204ENST00000415624 ABCA3Q99758 1704 aa15.01□□□□□ -0.01
TRAPPC12-204ENST00000415624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAPPC12-204ENST00000415624 CARD14Q9BXL6 1004 aa15.01□□□□□ -0.01
TRAPPC12-204ENST00000415624 PHRF1Q9P1Y6 1649 aaKnown RBP15□□□□□ -0.01
TRAPPC12-204ENST00000415624 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
TRAPPC12-204ENST00000415624 IFFO2Q5TF58 517 aa15□□□□□ -0.01
TRAPPC12-204ENST00000415624 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
TRAPPC12-204ENST00000415624 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-204ENST00000415624 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
TRAPPC12-204ENST00000415624 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
TRAPPC12-204ENST00000415624 TNS3Q68CZ2 1445 aa14.99□□□□□ -0.01
TRAPPC12-204ENST00000415624 SSH2Q76I76 1423 aa14.99□□□□□ -0.01
TRAPPC12-204ENST00000415624 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC12-204ENST00000415624 PSME1Q06323 249 aa14.98□□□□□ -0.01
TRAPPC12-204ENST00000415624 SF3B2Q13435 895 aaKnown RBP14.98□□□□□ -0.01
TRAPPC12-204ENST00000415624 DIEXFQ68CQ4 756 aaKnown RBP14.98□□□□□ -0.01
TRAPPC12-204ENST00000415624 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
TRAPPC12-204ENST00000415624 TTC21BQ7Z4L5 1316 aa14.97□□□□□ -0.01
TRAPPC12-204ENST00000415624 CC2D1BQ5T0F9 858 aaKnown RBP14.97□□□□□ -0.01
TRAPPC12-204ENST00000415624 KRT28Q7Z3Y7 464 aa14.97□□□□□ -0.01
TRAPPC12-204ENST00000415624 NME9Q86XW9 330 aa14.97□□□□□ -0.01
TRAPPC12-204ENST00000415624 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC12-204ENST00000415624 OVOS2A0A0J9YW53 1432 aa14.96□□□□□ -0.01
TRAPPC12-204ENST00000415624 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC12-204ENST00000415624 OVOS2Q6IE36 1432 aa14.96□□□□□ -0.01
TRAPPC12-204ENST00000415624 TTC21AQ8NDW8 1320 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 GLI3P10071 1580 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 LTN1O94822 1766 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 BRD4O60885 1362 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 NSD2O96028 1365 aa14.95□□□□□ -0.02
TRAPPC12-204ENST00000415624 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC12-204ENST00000415624 NUTM2GQ5VZR2 741 aa14.94□□□□□ -0.02
TRAPPC12-204ENST00000415624 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC12-204ENST00000415624 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
TRAPPC12-204ENST00000415624 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
TRAPPC12-204ENST00000415624 MAP2P11137 1827 aaKnown RBP14.92□□□□□ -0.02
TRAPPC12-204ENST00000415624 SLIT3O75094 1523 aa14.92□□□□□ -0.02
TRAPPC12-204ENST00000415624 R3HDM1Q15032 1099 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-204ENST00000415624 SEPT12Q8IYM1 358 aa14.91□□□□□ -0.02
TRAPPC12-204ENST00000415624 ABTB2Q8N961 1025 aa14.91□□□□□ -0.02
TRAPPC12-204ENST00000415624 SPATA31A3Q5VYP0 1347 aa14.91□□□□□ -0.02
TRAPPC12-204ENST00000415624 ARHGEF10O15013 1369 aa14.9□□□□□ -0.02
TRAPPC12-204ENST00000415624 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
TRAPPC12-204ENST00000415624 FYB1O15117 783 aa14.9□□□□□ -0.02
TRAPPC12-204ENST00000415624 SOX12O15370 315 aa14.9□□□□□ -0.02
TRAPPC12-204ENST00000415624 ANP32CO43423 234 aa14.9□□□□□ -0.02
TRAPPC12-204ENST00000415624 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
TRAPPC12-204ENST00000415624 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.89□□□□□ -0.03
TRAPPC12-204ENST00000415624 NFAT5O94916 1531 aa14.89□□□□□ -0.03
TRAPPC12-204ENST00000415624 TNNT2P45379 298 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms