RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 STAG3Q9UJ98 1225 aa15□□□□□ -0.01
RBM28-202ENST00000415472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
RBM28-202ENST00000415472 ANKRD26Q9UPS8 1709 aa14.99□□□□□ -0.01
RBM28-202ENST00000415472 MLECQ14165 292 aa14.98□□□□□ -0.01
RBM28-202ENST00000415472 VIRMAQ69YN4 1812 aaKnown RBP14.98□□□□□ -0.01
RBM28-202ENST00000415472 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
RBM28-202ENST00000415472 SSH1Q8WYL5 1049 aa14.97□□□□□ -0.01
RBM28-202ENST00000415472 PDZRN3Q9UPQ7 1066 aa14.97□□□□□ -0.01
RBM28-202ENST00000415472 MED14O60244 1454 aa14.96□□□□□ -0.01
RBM28-202ENST00000415472 PPM1GO15355 546 aaPredicted RBP14.96□□□□□ -0.01
RBM28-202ENST00000415472 MVPQ14764 893 aaKnown RBP14.96□□□□□ -0.01
RBM28-202ENST00000415472 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.01
RBM28-202ENST00000415472 A2ML1A8K2U0 1454 aa14.96□□□□□ -0.01
RBM28-202ENST00000415472 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
RBM28-202ENST00000415472 RIPK4P57078 832 aa14.96□□□□□ -0.01
RBM28-202ENST00000415472 HDGFL2Q7Z4V5 671 aaPredicted RBP14.96□□□□□ -0.01
RBM28-202ENST00000415472 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
RBM28-202ENST00000415472 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.02
RBM28-202ENST00000415472 DIP2BQ9P265 1576 aa14.95□□□□□ -0.02
RBM28-202ENST00000415472 TRIM27P14373 513 aa14.95□□□□□ -0.02
RBM28-202ENST00000415472 ZKSCAN2Q63HK3 967 aa14.95□□□□□ -0.02
RBM28-202ENST00000415472 PMFBP1Q8TBY8 1022 aa14.95□□□□□ -0.02
RBM28-202ENST00000415472 DZIP1LQ8IYY4 767 aaKnown RBP14.95□□□□□ -0.02
RBM28-202ENST00000415472 NFKBIBQ15653 356 aa14.94□□□□□ -0.02
RBM28-202ENST00000415472 KIF20BQ96Q89 1820 aa14.94□□□□□ -0.02
RBM28-202ENST00000415472 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
RBM28-202ENST00000415472 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
RBM28-202ENST00000415472 SETD1AO15047 1707 aaKnown RBP14.93□□□□□ -0.02
RBM28-202ENST00000415472 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
RBM28-202ENST00000415472 NCKAP5LQ9HCH0 1330 aa14.93□□□□□ -0.02
RBM28-202ENST00000415472 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
RBM28-202ENST00000415472 USP35Q9P2H5 1018 aa14.93□□□□□ -0.02
RBM28-202ENST00000415472 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
RBM28-202ENST00000415472 NOB1Q9ULX3 412 aaKnown RBP14.92□□□□□ -0.02
RBM28-202ENST00000415472 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
RBM28-202ENST00000415472 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
RBM28-202ENST00000415472 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
RBM28-202ENST00000415472 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
RBM28-202ENST00000415472 PHACTR3Q96KR7 559 aa14.92□□□□□ -0.02
RBM28-202ENST00000415472 PRKAR2BP31323 418 aa14.91□□□□□ -0.02
RBM28-202ENST00000415472 HMOX1P09601 288 aa14.91□□□□□ -0.02
RBM28-202ENST00000415472 AAMPQ13685 434 aa14.91□□□□□ -0.02
RBM28-202ENST00000415472 THUMPD2Q9BTF0 503 aaKnown RBP14.91□□□□□ -0.02
RBM28-202ENST00000415472 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
RBM28-202ENST00000415472 RWDD1Q9H446 243 aaPredicted RBP14.91□□□□□ -0.02
RBM28-202ENST00000415472 EMILIN1Q9Y6C2 1016 aa14.91□□□□□ -0.02
RBM28-202ENST00000415472 METP08581 1390 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 NME9Q86XW9 330 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 SPATA31D1Q6ZQQ2 1576 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 MAP2P11137 1827 aaKnown RBP14.9□□□□□ -0.02
RBM28-202ENST00000415472 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
RBM28-202ENST00000415472 ATF7IPQ6VMQ6 1270 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 TXNDC2Q86VQ3 553 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 ITPRIPQ8IWB1 547 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 AGLP35573 1532 aa14.9□□□□□ -0.02
RBM28-202ENST00000415472 NRXN3Q9Y4C0 1643 aa14.89□□□□□ -0.03
RBM28-202ENST00000415472 TMEM57Q8N5G2 664 aa14.89□□□□□ -0.03
RBM28-202ENST00000415472 IL16Q14005 1332 aa14.89□□□□□ -0.03
RBM28-202ENST00000415472 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
RBM28-202ENST00000415472 FCHSD2O94868 740 aa14.88□□□□□ -0.03
RBM28-202ENST00000415472 FAM135BQ49AJ0 1406 aa14.88□□□□□ -0.03
RBM28-202ENST00000415472 REREQ9P2R6 1566 aa14.88□□□□□ -0.03
RBM28-202ENST00000415472 ATP7BP35670 1465 aa14.87□□□□□ -0.03
RBM28-202ENST00000415472 CDC42BPGQ6DT37 1551 aa14.87□□□□□ -0.03
RBM28-202ENST00000415472 FRAT2O75474 233 aaPredicted RBP14.87□□□□□ -0.03
RBM28-202ENST00000415472 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
RBM28-202ENST00000415472 PPIP5K1Q6PFW1 1433 aa14.86□□□□□ -0.03
RBM28-202ENST00000415472 CPSF1Q10570 1443 aaKnown RBP14.86□□□□□ -0.03
RBM28-202ENST00000415472 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
RBM28-202ENST00000415472 IL13P35225 146 aa14.85□□□□□ -0.03
RBM28-202ENST00000415472 RRS1Q15050 365 aaKnown RBP14.85□□□□□ -0.03
RBM28-202ENST00000415472 TSPYL6Q8N831 410 aa14.85□□□□□ -0.03
RBM28-202ENST00000415472 ZBTB40Q9NUA8 1239 aa14.85□□□□□ -0.03
RBM28-202ENST00000415472 CPS1P31327 1500 aa14.84□□□□□ -0.03
RBM28-202ENST00000415472 NUDT16Q96DE0 195 aaKnown RBP14.84□□□□□ -0.03
RBM28-202ENST00000415472 DDX19BQ9UMR2 479 aa14.84□□□□□ -0.03
RBM28-202ENST00000415472 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.03
RBM28-202ENST00000415472 NFE2L2Q16236 605 aa14.83□□□□□ -0.03
RBM28-202ENST00000415472 TBC1D32Q96NH3 1257 aa14.83□□□□□ -0.03
RBM28-202ENST00000415472 ELL2O00472 640 aaPredicted RBP14.82□□□□□ -0.04
RBM28-202ENST00000415472 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
RBM28-202ENST00000415472 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
RBM28-202ENST00000415472 EDC4Q6P2E9 1401 aaKnown RBP14.82□□□□□ -0.04
RBM28-202ENST00000415472 ZMYM3Q14202 1370 aa14.82□□□□□ -0.04
RBM28-202ENST00000415472 PRR36Q9H6K5 1346 aa14.81□□□□□ -0.04
RBM28-202ENST00000415472 KIF16BQ96L93 1317 aa14.81□□□□□ -0.04
RBM28-202ENST00000415472 FAM83GA6ND36 823 aa14.81□□□□□ -0.04
RBM28-202ENST00000415472 VAMP4O75379 141 aa14.81□□□□□ -0.04
RBM28-202ENST00000415472 SMC5Q8IY18 1101 aa14.81□□□□□ -0.04
RBM28-202ENST00000415472 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
RBM28-202ENST00000415472 GSE1Q14687 1217 aa14.8□□□□□ -0.04
RBM28-202ENST00000415472 ALDH1L2Q3SY69 923 aa14.8□□□□□ -0.04
RBM28-202ENST00000415472 MBIPQ9NS73 344 aa14.8□□□□□ -0.04
RBM28-202ENST00000415472 DCTN1Q14203 1278 aa14.79□□□□□ -0.04
RBM28-202ENST00000415472 IL27Q8NEV9 243 aa14.79□□□□□ -0.04
RBM28-202ENST00000415472 C1orf115Q9H7X2 142 aa14.79□□□□□ -0.04
RBM28-202ENST00000415472 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
RBM28-202ENST00000415472 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
RBM28-202ENST00000415472 DLG5Q8TDM6 1919 aa14.78□□□□□ -0.04
RBM28-202ENST00000415472 IPO8O15397 1037 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms