RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 KIF21BO75037 1637 aa5.95□□□□□ -1.46
LINC01048-201ENST00000414480 PTPRGP23470 1445 aa5.94□□□□□ -1.46
LINC01048-201ENST00000414480 SUPT5HO00267 1087 aaKnown RBP5.94□□□□□ -1.46
LINC01048-201ENST00000414480 AXIN1O15169 862 aa5.94□□□□□ -1.46
LINC01048-201ENST00000414480 WFS1O76024 890 aa5.94□□□□□ -1.46
LINC01048-201ENST00000414480 CD2BP2O95400 341 aaKnown RBP5.94□□□□□ -1.46
LINC01048-201ENST00000414480 CDK11BP21127 795 aaKnown RBP5.94□□□□□ -1.46
LINC01048-201ENST00000414480 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
LINC01048-201ENST00000414480 CYP4X1Q8N118 509 aa5.94□□□□□ -1.46
LINC01048-201ENST00000414480 KCNV2Q8TDN2 545 aa5.94□□□□□ -1.46
LINC01048-201ENST00000414480 CDK11AQ9UQ88 783 aaPredicted RBP5.94□□□□□ -1.46
LINC01048-201ENST00000414480 FCF1Q9Y324 198 aaKnown RBP5.94□□□□□ -1.46
LINC01048-201ENST00000414480 UHRF1BP1LA0JNW5 1464 aa5.94□□□□□ -1.46
LINC01048-201ENST00000414480 WRNQ14191 1432 aaPredicted RBP eCLIP5.93□□□□□ -1.46
LINC01048-201ENST00000414480 C11orf95C9JLR9 678 aaPredicted RBP5.93□□□□□ -1.46
LINC01048-201ENST00000414480 GMPR2Q9P2T1 348 aaKnown RBP5.93□□□□□ -1.46
LINC01048-201ENST00000414480 DACH1Q9UI36 760 aa5.93□□□□□ -1.46
LINC01048-201ENST00000414480 KIAA0586Q9BVV6 1533 aa5.93□□□□□ -1.46
LINC01048-201ENST00000414480 TRIM26Q12899 539 aaPredicted RBP5.92□□□□□ -1.46
LINC01048-201ENST00000414480 STK17AQ9UEE5 414 aa5.92□□□□□ -1.46
LINC01048-201ENST00000414480 KDM5BQ9UGL1 1544 aa5.92□□□□□ -1.46
LINC01048-201ENST00000414480 MAGI3Q5TCQ9 1506 aa5.91□□□□□ -1.46
LINC01048-201ENST00000414480 WIPF1O43516 503 aa5.91□□□□□ -1.46
LINC01048-201ENST00000414480 MORN1Q5T089 497 aa5.91□□□□□ -1.46
LINC01048-201ENST00000414480 METTL3Q86U44 580 aaKnown RBP5.91□□□□□ -1.46
LINC01048-201ENST00000414480 THAP11Q96EK4 314 aa5.91□□□□□ -1.46
LINC01048-201ENST00000414480 FMNL1O95466 1100 aaPredicted RBP5.9□□□□□ -1.46
LINC01048-201ENST00000414480 INSM1Q01101 510 aaPredicted RBP5.9□□□□□ -1.46
LINC01048-201ENST00000414480 NFX1Q12986 1120 aaKnown RBP5.9□□□□□ -1.46
LINC01048-201ENST00000414480 HIC1Q14526 733 aa5.9□□□□□ -1.46
LINC01048-201ENST00000414480 RDH13Q8NBN7 331 aa5.9□□□□□ -1.46
LINC01048-201ENST00000414480 CUL7Q14999 1698 aa5.9□□□□□ -1.47
LINC01048-201ENST00000414480 TNIKQ9UKE5 1360 aa5.9□□□□□ -1.47
LINC01048-201ENST00000414480 UACAQ9BZF9 1416 aa5.9□□□□□ -1.47
LINC01048-201ENST00000414480 TTC24A2A3L6 582 aaPredicted RBP5.89□□□□□ -1.47
LINC01048-201ENST00000414480 ZBTB24O43167 697 aaPredicted RBP5.89□□□□□ -1.47
LINC01048-201ENST00000414480 ATP6V1AP38606 617 aa5.89□□□□□ -1.47
LINC01048-201ENST00000414480 SALL2Q9Y467 1007 aaPredicted RBP5.89□□□□□ -1.47
LINC01048-201ENST00000414480 ARAP3Q8WWN8 1544 aa5.89□□□□□ -1.47
LINC01048-201ENST00000414480 MADDQ8WXG6 1647 aa5.88□□□□□ -1.47
LINC01048-201ENST00000414480 PDE4CQ08493 712 aa5.88□□□□□ -1.47
LINC01048-201ENST00000414480 FUT2Q10981 343 aa5.88□□□□□ -1.47
LINC01048-201ENST00000414480 P3H3Q8IVL6 736 aa5.88□□□□□ -1.47
LINC01048-201ENST00000414480 FAM160A2Q8N612 972 aaPredicted RBP5.88□□□□□ -1.47
LINC01048-201ENST00000414480 UBE2Q2Q8WVN8 375 aa5.88□□□□□ -1.47
LINC01048-201ENST00000414480 BCORL1Q5H9F3 1711 aa5.88□□□□□ -1.47
LINC01048-201ENST00000414480 MSS51Q4VC12 460 aa5.87□□□□□ -1.47
LINC01048-201ENST00000414480 VSIG10Q8N0Z9 540 aa5.87□□□□□ -1.47
LINC01048-201ENST00000414480 PRDM9Q9NQV7 894 aa5.87□□□□□ -1.47
LINC01048-201ENST00000414480 SLC27A5Q9Y2P5 690 aa5.87□□□□□ -1.47
LINC01048-201ENST00000414480 CD109Q6YHK3 1445 aa5.87□□□□□ -1.47
LINC01048-201ENST00000414480 WDR7Q9Y4E6 1490 aa5.87□□□□□ -1.47
LINC01048-201ENST00000414480 DDX11L8A8MPP1 907 aa5.86□□□□□ -1.47
LINC01048-201ENST00000414480 WNT7AO00755 349 aa5.86□□□□□ -1.47
LINC01048-201ENST00000414480 SULF1Q8IWU6 871 aa5.86□□□□□ -1.47
LINC01048-201ENST00000414480 SNIP1Q8TAD8 396 aaKnown RBP5.86□□□□□ -1.47
LINC01048-201ENST00000414480 SENP2Q9HC62 589 aa5.86□□□□□ -1.47
LINC01048-201ENST00000414480 ATP13A2Q9NQ11 1180 aa5.86□□□□□ -1.47
LINC01048-201ENST00000414480 ZCCHC11Q5TAX3 1644 aaKnown RBP5.85□□□□□ -1.47
LINC01048-201ENST00000414480 BIVM-ERCC5R4GMW8 1640 aa5.85□□□□□ -1.47
LINC01048-201ENST00000414480 SEMA3EO15041 775 aa5.85□□□□□ -1.47
LINC01048-201ENST00000414480 HMGB1P09429 215 aaKnown RBP5.85□□□□□ -1.47
LINC01048-201ENST00000414480 GCGRP47871 477 aa5.85□□□□□ -1.47
LINC01048-201ENST00000414480 BRICD5Q6PL45 260 aa5.85□□□□□ -1.47
LINC01048-201ENST00000414480 CHMP4AQ9BY43 222 aa5.85□□□□□ -1.47
LINC01048-201ENST00000414480 LTBP4Q8N2S1 1624 aa5.85□□□□□ -1.47
LINC01048-201ENST00000414480 DISP1Q96F81 1524 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 IGF1RP08069 1367 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 TERTO14746 1132 aaKnown RBP5.84□□□□□ -1.47
LINC01048-201ENST00000414480 GNPATO15228 680 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 SMPD1P17405 629 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 TRIM32Q13049 653 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 GRIPAP1Q4V328 841 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 KIFC2Q96AC6 838 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 TRIM47Q96LD4 638 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 TSHZ2Q9NRE2 1034 aa5.84□□□□□ -1.47
LINC01048-201ENST00000414480 YEATS2Q9ULM3 1422 aa5.83□□□□□ -1.48
LINC01048-201ENST00000414480 STRCQ7RTU9 1775 aa5.83□□□□□ -1.48
LINC01048-201ENST00000414480 LOC105371045A0A1W2PR82 267 aa5.83□□□□□ -1.48
LINC01048-201ENST00000414480 RAPGEF3O95398 923 aa5.83□□□□□ -1.48
LINC01048-201ENST00000414480 CENPBP07199 599 aaPredicted RBP5.83□□□□□ -1.48
LINC01048-201ENST00000414480 TAF7LQ5H9L4 462 aa5.83□□□□□ -1.48
LINC01048-201ENST00000414480 REPIN1Q9BWE0 567 aaKnown RBP5.83□□□□□ -1.48
LINC01048-201ENST00000414480 CARMIL2Q6F5E8 1435 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 RIMS1Q86UR5 1692 aaKnown RBP5.82□□□□□ -1.48
LINC01048-201ENST00000414480 CFAP43Q8NDM7 1665 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 SNRPBP14678 240 aaKnown RBP5.82□□□□□ -1.48
LINC01048-201ENST00000414480 FECHP22830 423 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 BRD2P25440 801 aaKnown RBP5.82□□□□□ -1.48
LINC01048-201ENST00000414480 Q3C1V9 767 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 RNF19BQ6ZMZ0 732 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 PKNOX2Q96KN3 472 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 MRGPRX2Q96LB1 330 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 POLR3GLQ9BT43 218 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 IQSEC2Q5JU85 1478 aa5.82□□□□□ -1.48
LINC01048-201ENST00000414480 FRMPD1Q5SYB0 1578 aa5.81□□□□□ -1.48
LINC01048-201ENST00000414480 UBTFP17480 764 aaKnown RBP5.81□□□□□ -1.48
LINC01048-201ENST00000414480 MMP16P51512 607 aa5.81□□□□□ -1.48
LINC01048-201ENST00000414480 J3QL48 77 aa5.8□□□□□ -1.48
LINC01048-201ENST00000414480 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms