RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
NR1I3-208ENST00000412844 PDE4DQ08499 809 aa10.89□□□□□ -0.67
NR1I3-208ENST00000412844 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-208ENST00000412844 TTC13Q8NBP0 860 aa10.89□□□□□ -0.67
NR1I3-208ENST00000412844 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
NR1I3-208ENST00000412844 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
NR1I3-208ENST00000412844 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-208ENST00000412844 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
NR1I3-208ENST00000412844 PROX2Q3B8N5 592 aa10.88□□□□□ -0.67
NR1I3-208ENST00000412844 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
NR1I3-208ENST00000412844 ZBED2Q9BTP6 218 aa10.88□□□□□ -0.67
NR1I3-208ENST00000412844 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
NR1I3-208ENST00000412844 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-208ENST00000412844 ONECUT3O60422 494 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-208ENST00000412844 AMHR2Q16671 573 aa10.87□□□□□ -0.67
NR1I3-208ENST00000412844 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-208ENST00000412844 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-208ENST00000412844 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
NR1I3-208ENST00000412844 POTEEQ6S8J3 1075 aa10.86□□□□□ -0.67
NR1I3-208ENST00000412844 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-208ENST00000412844 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
NR1I3-208ENST00000412844 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
NR1I3-208ENST00000412844 POTEB3A0JP26 581 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 GGT6Q6P531 493 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 NUDT18Q6ZVK8 323 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 SLC4A5Q9BY07 1137 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
NR1I3-208ENST00000412844 HSPA1LP34931 641 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 HNRNPMP52272 730 aaKnown RBP eCLIP10.84□□□□□ -0.67
NR1I3-208ENST00000412844 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-208ENST00000412844 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 TATDN2Q93075 761 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
NR1I3-208ENST00000412844 TNRQ92752 1358 aa10.83□□□□□ -0.68
NR1I3-208ENST00000412844 CLCN1P35523 988 aa10.83□□□□□ -0.68
NR1I3-208ENST00000412844 RSPH4AQ5TD94 716 aa10.83□□□□□ -0.68
NR1I3-208ENST00000412844 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
NR1I3-208ENST00000412844 MED14O60244 1454 aa10.82□□□□□ -0.68
NR1I3-208ENST00000412844 PZPP20742 1482 aa10.82□□□□□ -0.68
NR1I3-208ENST00000412844 DHX29Q7Z478 1369 aaKnown RBP10.82□□□□□ -0.68
NR1I3-208ENST00000412844 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
NR1I3-208ENST00000412844 DEPDC5O75140 1603 aa10.82□□□□□ -0.68
NR1I3-208ENST00000412844 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
NR1I3-208ENST00000412844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
NR1I3-208ENST00000412844 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
NR1I3-208ENST00000412844 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
NR1I3-208ENST00000412844 NBPF3Q9H094 633 aa10.81□□□□□ -0.68
NR1I3-208ENST00000412844 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
NR1I3-208ENST00000412844 GPBP1L1Q9HC44 474 aaPredicted RBP10.81□□□□□ -0.68
NR1I3-208ENST00000412844 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
NR1I3-208ENST00000412844 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
NR1I3-208ENST00000412844 TK2O00142 265 aa10.8□□□□□ -0.68
NR1I3-208ENST00000412844 PARP9Q8IXQ6 854 aa10.8□□□□□ -0.68
NR1I3-208ENST00000412844 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
NR1I3-208ENST00000412844 GPCPD1Q9NPB8 672 aa10.8□□□□□ -0.68
NR1I3-208ENST00000412844 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
NR1I3-208ENST00000412844 NEURL4Q96JN8 1562 aa10.8□□□□□ -0.68
NR1I3-208ENST00000412844 SYNMO15061 1565 aa10.79□□□□□ -0.68
NR1I3-208ENST00000412844 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
NR1I3-208ENST00000412844 EYA1Q99502 592 aa10.79□□□□□ -0.68
NR1I3-208ENST00000412844 VWDEQ8N2E2 1590 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-208ENST00000412844 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 SMAPO00193 183 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 DNAJB2P25686 324 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
NR1I3-208ENST00000412844 GIGYF2Q6Y7W6 1299 aaKnown RBP10.78□□□□□ -0.68
NR1I3-208ENST00000412844 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 MBD5Q9P267 1494 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
NR1I3-208ENST00000412844 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.68
NR1I3-208ENST00000412844 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
NR1I3-208ENST00000412844 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
NR1I3-208ENST00000412844 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.69
NR1I3-208ENST00000412844 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
NR1I3-208ENST00000412844 NLRP7Q8WX94 980 aa10.76□□□□□ -0.69
NR1I3-208ENST00000412844 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
NR1I3-208ENST00000412844 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
NR1I3-208ENST00000412844 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
NR1I3-208ENST00000412844 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
NR1I3-208ENST00000412844 KIF3BO15066 747 aa10.75□□□□□ -0.69
NR1I3-208ENST00000412844 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
NR1I3-208ENST00000412844 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
NR1I3-208ENST00000412844 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
NR1I3-208ENST00000412844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-208ENST00000412844 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
NR1I3-208ENST00000412844 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
NR1I3-208ENST00000412844 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
NR1I3-208ENST00000412844 LAPTM4BQ86VI4 370 aa10.74□□□□□ -0.69
NR1I3-208ENST00000412844 POTEMA6NI47 508 aa10.73□□□□□ -0.69
NR1I3-208ENST00000412844 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
NR1I3-208ENST00000412844 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
NR1I3-208ENST00000412844 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms