RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
LINC00342-201ENST00000412393 HOXA2O43364 376 aa9.31□□□□□ -0.92
LINC00342-201ENST00000412393 TRIM46Q7Z4K8 759 aa9.31□□□□□ -0.92
LINC00342-201ENST00000412393 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
LINC00342-201ENST00000412393 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
LINC00342-201ENST00000412393 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
LINC00342-201ENST00000412393 MAP2K5Q13163 448 aa9.29□□□□□ -0.92
LINC00342-201ENST00000412393 RETREG3Q86VR2 466 aa9.29□□□□□ -0.92
LINC00342-201ENST00000412393 MPNDQ8N594 471 aa9.29□□□□□ -0.92
LINC00342-201ENST00000412393 BMP1P13497 986 aa9.28□□□□□ -0.92
LINC00342-201ENST00000412393 CUX1P39880 1505 aa9.27□□□□□ -0.93
LINC00342-201ENST00000412393 PLEKHG3A1L390 1219 aa9.27□□□□□ -0.93
LINC00342-201ENST00000412393 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC00342-201ENST00000412393 FGD5Q6ZNL6 1462 aa9.27□□□□□ -0.93
LINC00342-201ENST00000412393 RAD54L2Q9Y4B4 1467 aa9.27□□□□□ -0.93
LINC00342-201ENST00000412393 SOGA1O94964 1423 aa9.26□□□□□ -0.93
LINC00342-201ENST00000412393 VSIG8P0DPA2 414 aa9.26□□□□□ -0.93
LINC00342-201ENST00000412393 CHD1O14646 1710 aa9.25□□□□□ -0.93
LINC00342-201ENST00000412393 CCNYL3P0C7X3 344 aa9.24□□□□□ -0.93
LINC00342-201ENST00000412393 ZFP42Q96MM3 310 aa9.24□□□□□ -0.93
LINC00342-201ENST00000412393 SCARF1Q14162 830 aa9.23□□□□□ -0.93
LINC00342-201ENST00000412393 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
LINC00342-201ENST00000412393 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
LINC00342-201ENST00000412393 TDRD9Q8NDG6 1382 aaKnown RBP9.23□□□□□ -0.93
LINC00342-201ENST00000412393 IRF6O14896 467 aa9.22□□□□□ -0.93
LINC00342-201ENST00000412393 SH3BP2P78314 561 aa9.22□□□□□ -0.93
LINC00342-201ENST00000412393 PTCRAQ6ISU1 281 aaPredicted RBP9.22□□□□□ -0.93
LINC00342-201ENST00000412393 HLA-CQ95604 372 aa9.22□□□□□ -0.93
LINC00342-201ENST00000412393 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
LINC00342-201ENST00000412393 MS4A1P11836 297 aa9.21□□□□□ -0.94
LINC00342-201ENST00000412393 VARSP26640 1264 aaKnown RBP9.21□□□□□ -0.94
LINC00342-201ENST00000412393 CLCN1P35523 988 aa9.21□□□□□ -0.94
LINC00342-201ENST00000412393 MDM2Q00987 491 aaPredicted RBP9.21□□□□□ -0.94
LINC00342-201ENST00000412393 PTPRNQ16849 979 aa9.21□□□□□ -0.94
LINC00342-201ENST00000412393 VEGFBP49765 207 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 MRPL14Q6P1L8 145 aaKnown RBP9.2□□□□□ -0.94
LINC00342-201ENST00000412393 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 PBRM1Q86U86 1689 aa9.2□□□□□ -0.94
LINC00342-201ENST00000412393 ADH1CP00326 375 aa9.19□□□□□ -0.94
LINC00342-201ENST00000412393 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
LINC00342-201ENST00000412393 BIVM-ERCC5R4GMW8 1640 aa9.19□□□□□ -0.94
LINC00342-201ENST00000412393 KCNMA1Q12791 1236 aa9.18□□□□□ -0.94
LINC00342-201ENST00000412393 SNAPC4Q5SXM2 1469 aa9.18□□□□□ -0.94
LINC00342-201ENST00000412393 TOP2BQ02880 1626 aa9.17□□□□□ -0.94
LINC00342-201ENST00000412393 GRIN2BQ13224 1484 aa9.17□□□□□ -0.94
LINC00342-201ENST00000412393 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
LINC00342-201ENST00000412393 FDX1P10109 184 aa9.17□□□□□ -0.94
LINC00342-201ENST00000412393 NNTQ13423 1086 aa9.17□□□□□ -0.94
LINC00342-201ENST00000412393 UNC93B1Q9H1C4 597 aa9.17□□□□□ -0.94
LINC00342-201ENST00000412393 FAM217BQ9NTX9 383 aaPredicted RBP9.17□□□□□ -0.94
LINC00342-201ENST00000412393 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
LINC00342-201ENST00000412393 MAGI1Q96QZ7 1491 aaPredicted RBP9.16□□□□□ -0.94
LINC00342-201ENST00000412393 WRNQ14191 1432 aaPredicted RBP eCLIP9.16□□□□□ -0.94
LINC00342-201ENST00000412393 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
LINC00342-201ENST00000412393 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
LINC00342-201ENST00000412393 DESI1Q6ICB0 168 aa9.16□□□□□ -0.94
LINC00342-201ENST00000412393 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
LINC00342-201ENST00000412393 ABCA5Q8WWZ7 1642 aa9.16□□□□□ -0.94
LINC00342-201ENST00000412393 SYNJ1O43426 1573 aa9.16□□□□□ -0.94
LINC00342-201ENST00000412393 ARHGEF11O15085 1522 aa9.15□□□□□ -0.94
LINC00342-201ENST00000412393 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.94
LINC00342-201ENST00000412393 C6orf229H3BNL8 230 aa9.15□□□□□ -0.94
LINC00342-201ENST00000412393 KCNH2Q12809 1159 aa9.15□□□□□ -0.94
LINC00342-201ENST00000412393 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
LINC00342-201ENST00000412393 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
LINC00342-201ENST00000412393 TIMP2P16035 220 aa9.14□□□□□ -0.95
LINC00342-201ENST00000412393 CHMP7Q8WUX9 453 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-201ENST00000412393 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
LINC00342-201ENST00000412393 FAM174AQ8TBP5 190 aa9.13□□□□□ -0.95
LINC00342-201ENST00000412393 TLL2Q9Y6L7 1015 aa9.13□□□□□ -0.95
LINC00342-201ENST00000412393 SYNJ2O15056 1496 aa9.13□□□□□ -0.95
LINC00342-201ENST00000412393 RNF225M0QZC1 329 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-201ENST00000412393 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
LINC00342-201ENST00000412393 BAP1Q92560 729 aa9.12□□□□□ -0.95
LINC00342-201ENST00000412393 PURBQ96QR8 312 aaKnown RBP9.12□□□□□ -0.95
LINC00342-201ENST00000412393 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-201ENST00000412393 CLASP1Q7Z460 1538 aa9.1□□□□□ -0.95
LINC00342-201ENST00000412393 MAN1A2O60476 641 aa9.1□□□□□ -0.95
LINC00342-201ENST00000412393 CCDC102AQ96A19 550 aa9.1□□□□□ -0.95
LINC00342-201ENST00000412393 CDK15Q96Q40 435 aa9.1□□□□□ -0.95
LINC00342-201ENST00000412393 PCDHGC3Q9UN70 934 aa9.1□□□□□ -0.95
LINC00342-201ENST00000412393 NR5A1Q13285 461 aa9.09□□□□□ -0.95
LINC00342-201ENST00000412393 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
LINC00342-201ENST00000412393 UPP2O95045 317 aa9.08□□□□□ -0.96
LINC00342-201ENST00000412393 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
LINC00342-201ENST00000412393 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
LINC00342-201ENST00000412393 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
LINC00342-201ENST00000412393 GJA5P36382 358 aa9.07□□□□□ -0.96
LINC00342-201ENST00000412393 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
LINC00342-201ENST00000412393 MTMR2Q13614 643 aa9.06□□□□□ -0.96
LINC00342-201ENST00000412393 PRR7Q8TB68 274 aa9.06□□□□□ -0.96
LINC00342-201ENST00000412393 GRIN2AQ12879 1464 aa9.06□□□□□ -0.96
LINC00342-201ENST00000412393 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
LINC00342-201ENST00000412393 SPTLC1O15269 473 aa9.05□□□□□ -0.96
LINC00342-201ENST00000412393 PPFIA3O75145 1194 aa9.05□□□□□ -0.96
LINC00342-201ENST00000412393 GSK3AP49840 483 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms