RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 TMPOP42166 694 aaKnown RBP21.53■■□□□ 1.04
GRAMD1A-202ENST00000411896 TRIM35Q9UPQ4 493 aa21.52■■□□□ 1.04
GRAMD1A-202ENST00000411896 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
GRAMD1A-202ENST00000411896 ARHGEF40Q8TER5 1519 aa21.51■■□□□ 1.03
GRAMD1A-202ENST00000411896 SEC24BO95487 1268 aa21.5■■□□□ 1.03
GRAMD1A-202ENST00000411896 EXOSC9Q06265 439 aaKnown RBP21.49■■□□□ 1.03
GRAMD1A-202ENST00000411896 MVPQ14764 893 aaKnown RBP21.49■■□□□ 1.03
GRAMD1A-202ENST00000411896 ZKSCAN2Q63HK3 967 aa21.49■■□□□ 1.03
GRAMD1A-202ENST00000411896 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
GRAMD1A-202ENST00000411896 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
GRAMD1A-202ENST00000411896 NFKBIBQ15653 356 aa21.48■■□□□ 1.03
GRAMD1A-202ENST00000411896 CABP1Q9NZU7 370 aa21.48■■□□□ 1.03
GRAMD1A-202ENST00000411896 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
GRAMD1A-202ENST00000411896 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
GRAMD1A-202ENST00000411896 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
GRAMD1A-202ENST00000411896 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
GRAMD1A-202ENST00000411896 PNPLA6Q8IY17 1366 aa21.45■■□□□ 1.03
GRAMD1A-202ENST00000411896 KIF20BQ96Q89 1820 aa21.45■■□□□ 1.02
GRAMD1A-202ENST00000411896 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
GRAMD1A-202ENST00000411896 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
GRAMD1A-202ENST00000411896 RWDD1Q9H446 243 aaPredicted RBP21.45■■□□□ 1.02
GRAMD1A-202ENST00000411896 FTSJ3Q8IY81 847 aaKnown RBP21.44■■□□□ 1.02
GRAMD1A-202ENST00000411896 SSH1Q8WYL5 1049 aa21.44■■□□□ 1.02
GRAMD1A-202ENST00000411896 RIPK4P57078 832 aa21.44■■□□□ 1.02
GRAMD1A-202ENST00000411896 IL16Q14005 1332 aa21.43■■□□□ 1.02
GRAMD1A-202ENST00000411896 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
GRAMD1A-202ENST00000411896 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
GRAMD1A-202ENST00000411896 TRIM27P14373 513 aa21.42■■□□□ 1.02
GRAMD1A-202ENST00000411896 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
GRAMD1A-202ENST00000411896 ZMYM3Q14202 1370 aa21.41■■□□□ 1.02
GRAMD1A-202ENST00000411896 DLC1Q96QB1 1528 aa21.4■■□□□ 1.02
GRAMD1A-202ENST00000411896 FBLN1P23142 703 aa21.4■■□□□ 1.02
GRAMD1A-202ENST00000411896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
GRAMD1A-202ENST00000411896 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
GRAMD1A-202ENST00000411896 CDC42BPGQ6DT37 1551 aa21.39■■□□□ 1.01
GRAMD1A-202ENST00000411896 DIP2BQ9P265 1576 aa21.39■■□□□ 1.01
GRAMD1A-202ENST00000411896 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.01
GRAMD1A-202ENST00000411896 SETD1AO15047 1707 aaKnown RBP21.39■■□□□ 1.01
GRAMD1A-202ENST00000411896 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
GRAMD1A-202ENST00000411896 REREQ9P2R6 1566 aa21.38■■□□□ 1.01
GRAMD1A-202ENST00000411896 AGLP35573 1532 aa21.38■■□□□ 1.01
GRAMD1A-202ENST00000411896 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 ATF7IPQ6VMQ6 1270 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 SPATA31D1Q6ZQQ2 1576 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 ATP7BP35670 1465 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 POLKQ9UBT6 870 aa21.37■■□□□ 1.01
GRAMD1A-202ENST00000411896 ITPRIPQ8IWB1 547 aa21.36■■□□□ 1.01
GRAMD1A-202ENST00000411896 TSPOAP1O95153 1857 aa21.36■■□□□ 1.01
GRAMD1A-202ENST00000411896 RSPH6AQ9H0K4 717 aa21.36■■□□□ 1.01
GRAMD1A-202ENST00000411896 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
GRAMD1A-202ENST00000411896 FAM135BQ49AJ0 1406 aa21.35■■□□□ 1.01
GRAMD1A-202ENST00000411896 FCHSD2O94868 740 aa21.35■■□□□ 1.01
GRAMD1A-202ENST00000411896 PRKAR2BP31323 418 aa21.34■■□□□ 1.01
GRAMD1A-202ENST00000411896 DDX19BQ9UMR2 479 aa21.34■■□□□ 1.01
GRAMD1A-202ENST00000411896 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
GRAMD1A-202ENST00000411896 TMEM57Q8N5G2 664 aa21.34■■□□□ 1.01
GRAMD1A-202ENST00000411896 ANO8Q9HCE9 1232 aaPredicted RBP21.34■■□□□ 1.01
GRAMD1A-202ENST00000411896 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1
GRAMD1A-202ENST00000411896 HDAC1Q13547 482 aaPredicted RBP21.33■■□□□ 1
GRAMD1A-202ENST00000411896 MLECQ14165 292 aa21.32■■□□□ 1
GRAMD1A-202ENST00000411896 TBC1D32Q96NH3 1257 aa21.32■■□□□ 1
GRAMD1A-202ENST00000411896 GSE1Q14687 1217 aa21.31■■□□□ 1
GRAMD1A-202ENST00000411896 NRXN3Q9Y4C0 1643 aa21.31■■□□□ 1
GRAMD1A-202ENST00000411896 BECN1Q14457 450 aa21.3■■□□□ 1
GRAMD1A-202ENST00000411896 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
GRAMD1A-202ENST00000411896 KIF16BQ96L93 1317 aa21.3■■□□□ 1
GRAMD1A-202ENST00000411896 HMOX1P09601 288 aa21.29■■□□□ 1
GRAMD1A-202ENST00000411896 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
GRAMD1A-202ENST00000411896 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
GRAMD1A-202ENST00000411896 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
GRAMD1A-202ENST00000411896 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
GRAMD1A-202ENST00000411896 ZBTB40Q9NUA8 1239 aa21.29■■□□□ 1
GRAMD1A-202ENST00000411896 ZRANB1Q9UGI0 708 aa21.29■■□□□ 1
GRAMD1A-202ENST00000411896 METP08581 1390 aa21.29■■□□□ 1
GRAMD1A-202ENST00000411896 ALDH1L2Q3SY69 923 aa21.28■■□□□ 1
GRAMD1A-202ENST00000411896 NME9Q86XW9 330 aa21.28■■□□□ 1
GRAMD1A-202ENST00000411896 MAP2P11137 1827 aaKnown RBP21.28■■□□□ 1
GRAMD1A-202ENST00000411896 WASLO00401 505 aaPredicted RBP21.28■■□□□ 1
GRAMD1A-202ENST00000411896 NFE2L2Q16236 605 aa21.28■■□□□ 1
GRAMD1A-202ENST00000411896 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
GRAMD1A-202ENST00000411896 IPO8O15397 1037 aaKnown RBP21.27■■□□□ 1
GRAMD1A-202ENST00000411896 THUMPD2Q9BTF0 503 aaKnown RBP21.27■■□□□ 1
GRAMD1A-202ENST00000411896 SMC5Q8IY18 1101 aa21.26■□□□□ 0.99
GRAMD1A-202ENST00000411896 IL13P35225 146 aa21.26■□□□□ 0.99
GRAMD1A-202ENST00000411896 TXNDC2Q86VQ3 553 aa21.25■□□□□ 0.99
GRAMD1A-202ENST00000411896 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
GRAMD1A-202ENST00000411896 CPS1P31327 1500 aa21.24■□□□□ 0.99
GRAMD1A-202ENST00000411896 CDK12Q9NYV4 1490 aaPredicted RBP21.23■□□□□ 0.99
GRAMD1A-202ENST00000411896 SLKQ9H2G2 1235 aaPredicted RBP21.23■□□□□ 0.99
GRAMD1A-202ENST00000411896 IL27Q8NEV9 243 aa21.23■□□□□ 0.99
GRAMD1A-202ENST00000411896 NUDT16Q96DE0 195 aaKnown RBP21.23■□□□□ 0.99
GRAMD1A-202ENST00000411896 TBC1D2Q9BYX2 928 aa21.22■□□□□ 0.99
GRAMD1A-202ENST00000411896 VAMP4O75379 141 aa21.21■□□□□ 0.99
GRAMD1A-202ENST00000411896 BRPF1P55201 1214 aaPredicted RBP21.21■□□□□ 0.99
GRAMD1A-202ENST00000411896 AATKQ6ZMQ8 1374 aa21.21■□□□□ 0.99
GRAMD1A-202ENST00000411896 MRPL50Q8N5N7 158 aaKnown RBP21.21■□□□□ 0.99
GRAMD1A-202ENST00000411896 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
GRAMD1A-202ENST00000411896 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms