RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 KCNV2Q8TDN2 545 aa8.52□□□□□ -1.05
RAB28P1-201ENST00000411517 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
RAB28P1-201ENST00000411517 REREQ9P2R6 1566 aa8.52□□□□□ -1.05
RAB28P1-201ENST00000411517 SETBP1Q9Y6X0 1596 aa8.52□□□□□ -1.05
RAB28P1-201ENST00000411517 GOLGA3Q08378 1498 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 MROH2AA6NES4 1674 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 NUTM2FA1L443 756 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 TRAF7Q6Q0C0 670 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 EYA1Q99502 592 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 SYNMO15061 1565 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 VWDEQ8N2E2 1590 aa8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 CDK12Q9NYV4 1490 aaPredicted RBP8.51□□□□□ -1.05
RAB28P1-201ENST00000411517 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
RAB28P1-201ENST00000411517 NRG2O14511 850 aaPredicted RBP8.49□□□□□ -1.05
RAB28P1-201ENST00000411517 PRR14Q9BWN1 585 aa8.49□□□□□ -1.05
RAB28P1-201ENST00000411517 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
RAB28P1-201ENST00000411517 LRP5O75197 1615 aa8.48□□□□□ -1.05
RAB28P1-201ENST00000411517 ZPR1O75312 459 aa8.48□□□□□ -1.05
RAB28P1-201ENST00000411517 DNAJB2P25686 324 aa8.48□□□□□ -1.05
RAB28P1-201ENST00000411517 FAM161AQ3B820 660 aa8.48□□□□□ -1.05
RAB28P1-201ENST00000411517 RBM46Q8TBY0 533 aaKnown RBP8.48□□□□□ -1.05
RAB28P1-201ENST00000411517 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
RAB28P1-201ENST00000411517 PTGDRQ13258 359 aa8.47□□□□□ -1.05
RAB28P1-201ENST00000411517 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
RAB28P1-201ENST00000411517 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
RAB28P1-201ENST00000411517 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.05
RAB28P1-201ENST00000411517 ZNF772Q68DY9 489 aaPredicted RBP8.46□□□□□ -1.06
RAB28P1-201ENST00000411517 DIP2CQ9Y2E4 1556 aa8.46□□□□□ -1.06
RAB28P1-201ENST00000411517 RAPGEF6Q8TEU7 1601 aa8.45□□□□□ -1.06
RAB28P1-201ENST00000411517 TLL1O43897 1013 aa8.45□□□□□ -1.06
RAB28P1-201ENST00000411517 ADGRG1Q9Y653 693 aa8.45□□□□□ -1.06
RAB28P1-201ENST00000411517 FAM135BQ49AJ0 1406 aa8.45□□□□□ -1.06
RAB28P1-201ENST00000411517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
RAB28P1-201ENST00000411517 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
RAB28P1-201ENST00000411517 KMT5BQ4FZB7 885 aa8.44□□□□□ -1.06
RAB28P1-201ENST00000411517 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
RAB28P1-201ENST00000411517 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
RAB28P1-201ENST00000411517 KDM5CP41229 1560 aa8.44□□□□□ -1.06
RAB28P1-201ENST00000411517 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 CFHP08603 1231 aa8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 RXRBP28702 533 aa8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 ZNF518AQ6AHZ1 1483 aa8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 STRCP1A6NGW2 1772 aa8.43□□□□□ -1.06
RAB28P1-201ENST00000411517 A2ML1A8K2U0 1454 aa8.42□□□□□ -1.06
RAB28P1-201ENST00000411517 ABCA6Q8N139 1617 aa8.41□□□□□ -1.06
RAB28P1-201ENST00000411517 ZMYM3Q14202 1370 aa8.41□□□□□ -1.06
RAB28P1-201ENST00000411517 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
RAB28P1-201ENST00000411517 FCHSD2O94868 740 aa8.41□□□□□ -1.06
RAB28P1-201ENST00000411517 PPEF1O14829 653 aaPredicted RBP8.4□□□□□ -1.06
RAB28P1-201ENST00000411517 SEMA3EO15041 775 aa8.4□□□□□ -1.06
RAB28P1-201ENST00000411517 SLC19A1P41440 591 aa8.4□□□□□ -1.06
RAB28P1-201ENST00000411517 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
RAB28P1-201ENST00000411517 JCADQ9P266 1359 aa8.39□□□□□ -1.07
RAB28P1-201ENST00000411517 S1PR4O95977 384 aa8.39□□□□□ -1.07
RAB28P1-201ENST00000411517 YY1P25490 414 aa8.39□□□□□ -1.07
RAB28P1-201ENST00000411517 ROBO1Q9Y6N7 1651 aa8.39□□□□□ -1.07
RAB28P1-201ENST00000411517 MED14O60244 1454 aa8.38□□□□□ -1.07
RAB28P1-201ENST00000411517 IQGAP1P46940 1657 aa8.38□□□□□ -1.07
RAB28P1-201ENST00000411517 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
RAB28P1-201ENST00000411517 DEPDC5O75140 1603 aa8.38□□□□□ -1.07
RAB28P1-201ENST00000411517 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
RAB28P1-201ENST00000411517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
RAB28P1-201ENST00000411517 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
RAB28P1-201ENST00000411517 RGS12O14924 1447 aa8.37□□□□□ -1.07
RAB28P1-201ENST00000411517 CLTCQ00610 1675 aaKnown RBP8.37□□□□□ -1.07
RAB28P1-201ENST00000411517 LRP6O75581 1613 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 XIRP1Q702N8 1843 aaKnown RBP8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 NR1I2O75469 434 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 SLC10A3P09131 477 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 ZNF787Q6DD87 383 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 PHLPP1O60346 1717 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 PLCH2O75038 1416 aa8.36□□□□□ -1.07
RAB28P1-201ENST00000411517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
RAB28P1-201ENST00000411517 EP400Q96L91 3159 aa8.35□□□□□ -1.07
RAB28P1-201ENST00000411517 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
RAB28P1-201ENST00000411517 SENP3-EIF4A1A0A087X0R7 540 aa8.35□□□□□ -1.07
RAB28P1-201ENST00000411517 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
RAB28P1-201ENST00000411517 NHSL1Q5SYE7 1610 aa8.35□□□□□ -1.07
RAB28P1-201ENST00000411517 SPATA31A6Q5VVP1 1343 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 PLEKHD1A6NEE1 506 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 ADH1BP00325 375 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 OATP04181 439 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 SPRYD7Q5W111 196 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 ANKLE2Q86XL3 938 aa8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 EMID1Q96A84 441 aaPredicted RBP8.34□□□□□ -1.07
RAB28P1-201ENST00000411517 NUP153P49790 1475 aaKnown RBP8.33□□□□□ -1.08
RAB28P1-201ENST00000411517 LRRC9Q6ZRR7 1453 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms