RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TECPR2O15040 1411 aa19.76■□□□□ 0.75
SCAMP4-202ENST00000409472 LTKP29376 864 aa19.76■□□□□ 0.75
SCAMP4-202ENST00000409472 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
SCAMP4-202ENST00000409472 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.75■□□□□ 0.75
SCAMP4-202ENST00000409472 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-202ENST00000409472 NME9Q86XW9 330 aa19.74■□□□□ 0.75
SCAMP4-202ENST00000409472 BCL2L13Q9BXK5 485 aa19.74■□□□□ 0.75
SCAMP4-202ENST00000409472 TNNQ9UQP3 1299 aa19.73■□□□□ 0.75
SCAMP4-202ENST00000409472 C3P01024 1663 aa19.73■□□□□ 0.75
SCAMP4-202ENST00000409472 TRHP20396 242 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-202ENST00000409472 PRR36Q9H6K5 1346 aa19.73■□□□□ 0.75
SCAMP4-202ENST00000409472 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
SCAMP4-202ENST00000409472 LRRC7Q96NW7 1537 aa19.73■□□□□ 0.75
SCAMP4-202ENST00000409472 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 PPM1GO15355 546 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 CCDC27Q2M243 656 aa19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 CDC42BPGQ6DT37 1551 aa19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 WDR63Q8IWG1 891 aa19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 PANK1Q8TE04 598 aa19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 FAM135BQ49AJ0 1406 aa19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 MON2Q7Z3U7 1717 aa19.72■□□□□ 0.75
SCAMP4-202ENST00000409472 TSR2Q969E8 191 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-202ENST00000409472 NUDT16Q96DE0 195 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-202ENST00000409472 TCERG1O14776 1098 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-202ENST00000409472 POLKQ9UBT6 870 aa19.71■□□□□ 0.75
SCAMP4-202ENST00000409472 RARSP54136 660 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-202ENST00000409472 TRIM35Q9UPQ4 493 aa19.7■□□□□ 0.74
SCAMP4-202ENST00000409472 DIAPH1O60610 1272 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-202ENST00000409472 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-202ENST00000409472 FRAT1Q92837 279 aaPredicted RBP19.7■□□□□ 0.74
SCAMP4-202ENST00000409472 EMILIN1Q9Y6C2 1016 aa19.7■□□□□ 0.74
SCAMP4-202ENST00000409472 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-202ENST00000409472 SLC26A8Q96RN1 970 aa19.69■□□□□ 0.74
SCAMP4-202ENST00000409472 AKAP12Q02952 1782 aa19.69■□□□□ 0.74
SCAMP4-202ENST00000409472 FER1L4A9Z1Z3 1794 aa19.68■□□□□ 0.74
SCAMP4-202ENST00000409472 ITSN1Q15811 1721 aa19.68■□□□□ 0.74
SCAMP4-202ENST00000409472 NUTM2FA1L443 756 aa19.68■□□□□ 0.74
SCAMP4-202ENST00000409472 COG6Q9Y2V7 657 aa19.68■□□□□ 0.74
SCAMP4-202ENST00000409472 PTPRUQ92729 1446 aa19.68■□□□□ 0.74
SCAMP4-202ENST00000409472 PDE4AP27815 886 aa19.68■□□□□ 0.74
SCAMP4-202ENST00000409472 RLBP1P12271 317 aa19.66■□□□□ 0.74
SCAMP4-202ENST00000409472 CANXP27824 592 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-202ENST00000409472 PLEKHG1Q9ULL1 1385 aa19.66■□□□□ 0.74
SCAMP4-202ENST00000409472 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
SCAMP4-202ENST00000409472 HDGFP51858 240 aaKnown RBP19.65■□□□□ 0.74
SCAMP4-202ENST00000409472 CENPQQ7L2Z9 268 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-202ENST00000409472 CCDC61Q9Y6R9 512 aa19.65■□□□□ 0.74
SCAMP4-202ENST00000409472 BACH2Q9BYV9 841 aa19.64■□□□□ 0.73
SCAMP4-202ENST00000409472 TOPAZ1Q8N9V7 1692 aa19.64■□□□□ 0.73
SCAMP4-202ENST00000409472 HMOX1P09601 288 aa19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 MYH16Q9H6N6 1097 aa19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 IGHDP01880 384 aa19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 PDE3AQ14432 1141 aa19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 SIRT1Q96EB6 747 aa19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 RSPH6AQ9H0K4 717 aa19.63■□□□□ 0.73
SCAMP4-202ENST00000409472 PRKAR2BP31323 418 aa19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 RIPK4P57078 832 aa19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 NRKQ7Z2Y5 1582 aa19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 MS4A1P11836 297 aa19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 UBE2Q2Q8WVN8 375 aa19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
SCAMP4-202ENST00000409472 EXOSC9Q06265 439 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-202ENST00000409472 PHACTR3Q96KR7 559 aa19.61■□□□□ 0.73
SCAMP4-202ENST00000409472 NCBP3Q53F19 620 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-202ENST00000409472 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-202ENST00000409472 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
SCAMP4-202ENST00000409472 SLIT1O75093 1534 aa19.6■□□□□ 0.73
SCAMP4-202ENST00000409472 IL13P35225 146 aa19.58■□□□□ 0.72
SCAMP4-202ENST00000409472 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-202ENST00000409472 RGS3P49796 1198 aa19.57■□□□□ 0.72
SCAMP4-202ENST00000409472 COG3Q96JB2 828 aa19.57■□□□□ 0.72
SCAMP4-202ENST00000409472 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
SCAMP4-202ENST00000409472 ACEP12821 1306 aa19.56■□□□□ 0.72
SCAMP4-202ENST00000409472 FCHSD2O94868 740 aa19.56■□□□□ 0.72
SCAMP4-202ENST00000409472 NOP58Q9Y2X3 529 aaKnown RBP19.56■□□□□ 0.72
SCAMP4-202ENST00000409472 AATKQ6ZMQ8 1374 aa19.55■□□□□ 0.72
SCAMP4-202ENST00000409472 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
SCAMP4-202ENST00000409472 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
SCAMP4-202ENST00000409472 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-202ENST00000409472 EID1Q9Y6B2 187 aa19.55■□□□□ 0.72
SCAMP4-202ENST00000409472 SSH1Q8WYL5 1049 aa19.54■□□□□ 0.72
SCAMP4-202ENST00000409472 PCDHB15Q9Y5E8 787 aa19.54■□□□□ 0.72
SCAMP4-202ENST00000409472 DLG5Q8TDM6 1919 aa19.54■□□□□ 0.72
SCAMP4-202ENST00000409472 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
SCAMP4-202ENST00000409472 SMC4Q9NTJ3 1288 aa19.53■□□□□ 0.72
SCAMP4-202ENST00000409472 PEAK1Q9H792 1746 aa19.53■□□□□ 0.72
SCAMP4-202ENST00000409472 USP6P35125 1406 aa19.53■□□□□ 0.72
SCAMP4-202ENST00000409472 OVOS2A0A0J9YW53 1432 aa19.52■□□□□ 0.72
SCAMP4-202ENST00000409472 OVOS2Q6IE36 1432 aa19.52■□□□□ 0.72
SCAMP4-202ENST00000409472 IL16Q14005 1332 aa19.51■□□□□ 0.71
SCAMP4-202ENST00000409472 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
SCAMP4-202ENST00000409472 DIP2AQ14689 1571 aa19.51■□□□□ 0.71
SCAMP4-202ENST00000409472 SOX12O15370 315 aa19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 NFE2L2Q16236 605 aa19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
SCAMP4-202ENST00000409472 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms