RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 METP08581 1390 aa19.65■□□□□ 0.74
LIMS2-205ENST00000409455 NGEFQ8N5V2 710 aa19.64■□□□□ 0.74
LIMS2-205ENST00000409455 TBC1D32Q96NH3 1257 aa19.64■□□□□ 0.74
LIMS2-205ENST00000409455 PUS7Q96PZ0 661 aaKnown RBP19.64■□□□□ 0.74
LIMS2-205ENST00000409455 ARXQ96QS3 562 aa19.64■□□□□ 0.74
LIMS2-205ENST00000409455 WAPLQ7Z5K2 1190 aa19.64■□□□□ 0.73
LIMS2-205ENST00000409455 COG6Q9Y2V7 657 aa19.64■□□□□ 0.73
LIMS2-205ENST00000409455 TULP4Q9NRJ4 1543 aa19.64■□□□□ 0.73
LIMS2-205ENST00000409455 XRCC6P12956 609 aaKnown RBP eCLIP19.63■□□□□ 0.73
LIMS2-205ENST00000409455 NAP1L5Q96NT1 182 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-205ENST00000409455 TXNDC2Q86VQ3 553 aa19.63■□□□□ 0.73
LIMS2-205ENST00000409455 TBC1D2Q9BYX2 928 aa19.63■□□□□ 0.73
LIMS2-205ENST00000409455 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
LIMS2-205ENST00000409455 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
LIMS2-205ENST00000409455 PMFBP1Q8TBY8 1022 aa19.62■□□□□ 0.73
LIMS2-205ENST00000409455 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
LIMS2-205ENST00000409455 FSD2A1L4K1 749 aa19.62■□□□□ 0.73
LIMS2-205ENST00000409455 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
LIMS2-205ENST00000409455 ABCC11Q96J66 1382 aa19.61■□□□□ 0.73
LIMS2-205ENST00000409455 CLCN1P35523 988 aa19.61■□□□□ 0.73
LIMS2-205ENST00000409455 AAMPQ13685 434 aa19.6■□□□□ 0.73
LIMS2-205ENST00000409455 SETD1AO15047 1707 aaKnown RBP19.59■□□□□ 0.73
LIMS2-205ENST00000409455 MCM4P33991 863 aa19.59■□□□□ 0.73
LIMS2-205ENST00000409455 EID1Q9Y6B2 187 aa19.59■□□□□ 0.73
LIMS2-205ENST00000409455 THEMISQ8N1K5 641 aaPredicted RBP19.58■□□□□ 0.73
LIMS2-205ENST00000409455 CDK19Q9BWU1 502 aa19.58■□□□□ 0.72
LIMS2-205ENST00000409455 GZF1Q9H116 711 aaPredicted RBP19.57■□□□□ 0.72
LIMS2-205ENST00000409455 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
LIMS2-205ENST00000409455 PKNOX2Q96KN3 472 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 PANK2Q9BZ23 570 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 ADAMTS13Q76LX8 1427 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 NSD3Q9BZ95 1437 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 HSP90AA1P07900 732 aaKnown RBP19.56■□□□□ 0.72
LIMS2-205ENST00000409455 SLC26A8Q96RN1 970 aa19.56■□□□□ 0.72
LIMS2-205ENST00000409455 MRE11P49959 708 aa19.55■□□□□ 0.72
LIMS2-205ENST00000409455 HSP90AA2PQ14568 343 aaPredicted RBP19.54■□□□□ 0.72
LIMS2-205ENST00000409455 RRP9O43818 475 aaKnown RBP19.53■□□□□ 0.72
LIMS2-205ENST00000409455 SPRYD3Q8NCJ5 442 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 CHMP5Q9NZZ3 219 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 TRAK2O60296 914 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 WWC1Q8IX03 1113 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 PDZRN3Q9UPQ7 1066 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 ATAD2Q6PL18 1390 aa19.53■□□□□ 0.72
LIMS2-205ENST00000409455 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.72
LIMS2-205ENST00000409455 SLIT1O75093 1534 aa19.52■□□□□ 0.72
LIMS2-205ENST00000409455 RIMS1Q86UR5 1692 aaKnown RBP19.52■□□□□ 0.72
LIMS2-205ENST00000409455 SIRT1Q96EB6 747 aa19.51■□□□□ 0.71
LIMS2-205ENST00000409455 RWDD1Q9H446 243 aaPredicted RBP19.51■□□□□ 0.71
LIMS2-205ENST00000409455 PCDHB15Q9Y5E8 787 aa19.51■□□□□ 0.71
LIMS2-205ENST00000409455 CABP1Q9NZU7 370 aa19.5■□□□□ 0.71
LIMS2-205ENST00000409455 ISY1Q9ULR0 285 aaKnown RBP19.49■□□□□ 0.71
LIMS2-205ENST00000409455 TECPR2O15040 1411 aa19.49■□□□□ 0.71
LIMS2-205ENST00000409455 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
LIMS2-205ENST00000409455 RARSP54136 660 aaKnown RBP19.49■□□□□ 0.71
LIMS2-205ENST00000409455 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
LIMS2-205ENST00000409455 A0A1W2PP64 1363 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 FAM135BQ49AJ0 1406 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 MORC1Q86VD1 984 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
LIMS2-205ENST00000409455 C22orf23Q9BZE7 217 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 MED14O60244 1454 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
LIMS2-205ENST00000409455 VSIG10Q8N0Z9 540 aa19.47■□□□□ 0.71
LIMS2-205ENST00000409455 TERF2IPQ9NYB0 399 aa19.47■□□□□ 0.71
LIMS2-205ENST00000409455 TBX22Q9Y458 520 aa19.47■□□□□ 0.71
LIMS2-205ENST00000409455 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
LIMS2-205ENST00000409455 GRPEL1Q9HAV7 217 aa19.47■□□□□ 0.71
LIMS2-205ENST00000409455 RLBP1P12271 317 aa19.45■□□□□ 0.7
LIMS2-205ENST00000409455 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
LIMS2-205ENST00000409455 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
LIMS2-205ENST00000409455 CEP170BQ9Y4F5 1589 aaPredicted RBP19.45■□□□□ 0.7
LIMS2-205ENST00000409455 CD163L1Q9NR16 1453 aa19.44■□□□□ 0.7
LIMS2-205ENST00000409455 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
LIMS2-205ENST00000409455 ESPNB1AK53 854 aa19.44■□□□□ 0.7
LIMS2-205ENST00000409455 HSCBQ8IWL3 235 aa19.44■□□□□ 0.7
LIMS2-205ENST00000409455 MFAP1P55081 439 aaKnown RBP19.44■□□□□ 0.7
LIMS2-205ENST00000409455 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
LIMS2-205ENST00000409455 TRIM44Q96DX7 344 aaPredicted RBP19.43■□□□□ 0.7
LIMS2-205ENST00000409455 CPS1P31327 1500 aa19.42■□□□□ 0.7
LIMS2-205ENST00000409455 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
LIMS2-205ENST00000409455 ZMYND15Q9H091 742 aa19.42■□□□□ 0.7
LIMS2-205ENST00000409455 KNDC1Q76NI1 1749 aa19.42■□□□□ 0.7
LIMS2-205ENST00000409455 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
LIMS2-205ENST00000409455 NCKAP5LQ9HCH0 1330 aa19.41■□□□□ 0.7
LIMS2-205ENST00000409455 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
LIMS2-205ENST00000409455 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
LIMS2-205ENST00000409455 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
LIMS2-205ENST00000409455 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
LIMS2-205ENST00000409455 FYB1O15117 783 aa19.4■□□□□ 0.7
LIMS2-205ENST00000409455 RUNDC1Q96C34 613 aa19.4■□□□□ 0.7
LIMS2-205ENST00000409455 USP32Q8NFA0 1604 aa19.39■□□□□ 0.7
LIMS2-205ENST00000409455 WDR63Q8IWG1 891 aa19.39■□□□□ 0.69
LIMS2-205ENST00000409455 MVPQ14764 893 aaKnown RBP19.39■□□□□ 0.69
LIMS2-205ENST00000409455 RRP7AQ9Y3A4 280 aaKnown RBP19.39■□□□□ 0.69
LIMS2-205ENST00000409455 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
LIMS2-205ENST00000409455 NSD2O96028 1365 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms