RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 TNRQ92752 1358 aa21.93■■□□□ 1.1
DNMT3A-205ENST00000402667 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
DNMT3A-205ENST00000402667 DIAPH1O60610 1272 aaKnown RBP21.93■■□□□ 1.1
DNMT3A-205ENST00000402667 PAK3O75914 559 aaPredicted RBP21.93■■□□□ 1.1
DNMT3A-205ENST00000402667 TXNDC2Q86VQ3 553 aa21.93■■□□□ 1.1
DNMT3A-205ENST00000402667 PANK1Q8TE04 598 aa21.93■■□□□ 1.1
DNMT3A-205ENST00000402667 TMPOP42166 694 aaKnown RBP21.92■■□□□ 1.1
DNMT3A-205ENST00000402667 FRAT1Q92837 279 aaPredicted RBP21.92■■□□□ 1.1
DNMT3A-205ENST00000402667 COG6Q9Y2V7 657 aa21.91■■□□□ 1.1
DNMT3A-205ENST00000402667 MAPK8IP3Q9UPT6 1336 aa21.9■■□□□ 1.1
DNMT3A-205ENST00000402667 NPM2Q86SE8 214 aaKnown RBP21.9■■□□□ 1.1
DNMT3A-205ENST00000402667 SIRT1Q96EB6 747 aa21.9■■□□□ 1.1
DNMT3A-205ENST00000402667 TRIM35Q9UPQ4 493 aa21.9■■□□□ 1.1
DNMT3A-205ENST00000402667 CPSF1Q10570 1443 aaKnown RBP21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 TMEM2Q9UHN6 1383 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 FBLN1P23142 703 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 CLUAP1Q96AJ1 413 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 BCL2L13Q9BXK5 485 aa21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 ZBTB47Q9UFB7 747 aaPredicted RBP21.88■■□□□ 1.09
DNMT3A-205ENST00000402667 IGHDP01880 384 aa21.87■■□□□ 1.09
DNMT3A-205ENST00000402667 TECPR2O15040 1411 aa21.87■■□□□ 1.09
DNMT3A-205ENST00000402667 NUDT16Q96DE0 195 aaKnown RBP21.86■■□□□ 1.09
DNMT3A-205ENST00000402667 PNNQ9H307 717 aaKnown RBP21.86■■□□□ 1.09
DNMT3A-205ENST00000402667 TSR2Q969E8 191 aaKnown RBP21.85■■□□□ 1.09
DNMT3A-205ENST00000402667 KNDC1Q76NI1 1749 aa21.85■■□□□ 1.09
DNMT3A-205ENST00000402667 EDC4Q6P2E9 1401 aaKnown RBP21.85■■□□□ 1.09
DNMT3A-205ENST00000402667 UBR1Q8IWV7 1749 aa21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 RLBP1P12271 317 aa21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 RIPK4P57078 832 aa21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 TNNQ9UQP3 1299 aa21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 FCHSD2O94868 740 aa21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 CT47B1P0C2W7 299 aaPredicted RBP21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 CCDC61Q9Y6R9 512 aa21.84■■□□□ 1.09
DNMT3A-205ENST00000402667 NME9Q86XW9 330 aa21.83■■□□□ 1.08
DNMT3A-205ENST00000402667 IL16Q14005 1332 aa21.83■■□□□ 1.08
DNMT3A-205ENST00000402667 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.08
DNMT3A-205ENST00000402667 CPS1P31327 1500 aa21.82■■□□□ 1.08
DNMT3A-205ENST00000402667 CDC42BPGQ6DT37 1551 aa21.82■■□□□ 1.08
DNMT3A-205ENST00000402667 RGS3P49796 1198 aa21.81■■□□□ 1.08
DNMT3A-205ENST00000402667 EXOSC9Q06265 439 aaKnown RBP21.81■■□□□ 1.08
DNMT3A-205ENST00000402667 MAP2P11137 1827 aaKnown RBP21.81■■□□□ 1.08
DNMT3A-205ENST00000402667 AAMPQ13685 434 aa21.81■■□□□ 1.08
DNMT3A-205ENST00000402667 FAM161AQ3B820 660 aa21.8■■□□□ 1.08
DNMT3A-205ENST00000402667 RSPH6AQ9H0K4 717 aa21.8■■□□□ 1.08
DNMT3A-205ENST00000402667 ZRANB1Q9UGI0 708 aa21.8■■□□□ 1.08
DNMT3A-205ENST00000402667 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
DNMT3A-205ENST00000402667 PRKAR2BP31323 418 aa21.79■■□□□ 1.08
DNMT3A-205ENST00000402667 EMILIN1Q9Y6C2 1016 aa21.79■■□□□ 1.08
DNMT3A-205ENST00000402667 ROBO2Q9HCK4 1378 aa21.78■■□□□ 1.08
DNMT3A-205ENST00000402667 C8orf34Q49A92 452 aa21.78■■□□□ 1.08
DNMT3A-205ENST00000402667 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
DNMT3A-205ENST00000402667 LTKP29376 864 aa21.78■■□□□ 1.08
DNMT3A-205ENST00000402667 PRR36Q9H6K5 1346 aa21.77■■□□□ 1.08
DNMT3A-205ENST00000402667 ZKSCAN2Q63HK3 967 aa21.77■■□□□ 1.08
DNMT3A-205ENST00000402667 AATKQ6ZMQ8 1374 aa21.76■■□□□ 1.07
DNMT3A-205ENST00000402667 CEBPAP49715 358 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-205ENST00000402667 PCDHB15Q9Y5E8 787 aa21.76■■□□□ 1.07
DNMT3A-205ENST00000402667 COG3Q96JB2 828 aa21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 ZNF692Q9BU19 519 aaPredicted RBP21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 PLEKHG1Q9ULL1 1385 aa21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 IL13P35225 146 aa21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 PMFBP1Q8TBY8 1022 aa21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 SMC4Q9NTJ3 1288 aa21.75■■□□□ 1.07
DNMT3A-205ENST00000402667 NEFMP07197 916 aa21.74■■□□□ 1.07
DNMT3A-205ENST00000402667 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
DNMT3A-205ENST00000402667 HMOX1P09601 288 aa21.74■■□□□ 1.07
DNMT3A-205ENST00000402667 MVPQ14764 893 aaKnown RBP21.74■■□□□ 1.07
DNMT3A-205ENST00000402667 DZIP1LQ8IYY4 767 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-205ENST00000402667 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
DNMT3A-205ENST00000402667 CDK12Q9NYV4 1490 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-205ENST00000402667 AKAP12Q02952 1782 aa21.72■■□□□ 1.07
DNMT3A-205ENST00000402667 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
DNMT3A-205ENST00000402667 NFE2L2Q16236 605 aa21.71■■□□□ 1.07
DNMT3A-205ENST00000402667 C3P01024 1663 aa21.71■■□□□ 1.07
DNMT3A-205ENST00000402667 RRS1Q15050 365 aaKnown RBP21.71■■□□□ 1.07
DNMT3A-205ENST00000402667 ITSN1Q15811 1721 aa21.7■■□□□ 1.06
DNMT3A-205ENST00000402667 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.7■■□□□ 1.06
DNMT3A-205ENST00000402667 TRIM27P14373 513 aa21.69■■□□□ 1.06
DNMT3A-205ENST00000402667 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
DNMT3A-205ENST00000402667 DDRGK1Q96HY6 314 aa21.68■■□□□ 1.06
DNMT3A-205ENST00000402667 EID1Q9Y6B2 187 aa21.68■■□□□ 1.06
DNMT3A-205ENST00000402667 ATF7IPQ6VMQ6 1270 aa21.68■■□□□ 1.06
DNMT3A-205ENST00000402667 NOB1Q9ULX3 412 aaKnown RBP21.68■■□□□ 1.06
DNMT3A-205ENST00000402667 RWDD1Q9H446 243 aaPredicted RBP21.67■■□□□ 1.06
DNMT3A-205ENST00000402667 PTPRUQ92729 1446 aa21.67■■□□□ 1.06
DNMT3A-205ENST00000402667 NBR1Q14596 966 aa21.67■■□□□ 1.06
DNMT3A-205ENST00000402667 ACEP12821 1306 aa21.66■■□□□ 1.06
DNMT3A-205ENST00000402667 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
DNMT3A-205ENST00000402667 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
DNMT3A-205ENST00000402667 LAS1LQ9Y4W2 734 aaKnown RBP21.66■■□□□ 1.06
DNMT3A-205ENST00000402667 NUTM2FA1L443 756 aa21.65■■□□□ 1.06
DNMT3A-205ENST00000402667 THUMPD2Q9BTF0 503 aaKnown RBP21.64■■□□□ 1.06
DNMT3A-205ENST00000402667 ALDH1L2Q3SY69 923 aa21.64■■□□□ 1.05
DNMT3A-205ENST00000402667 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
DNMT3A-205ENST00000402667 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms