RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
ATG3-202ENST00000402314 YTHDC2Q9H6S0 1430 aaKnown RBP17.95■□□□□ 0.46
ATG3-202ENST00000402314 TMPOP42166 694 aaKnown RBP17.95■□□□□ 0.46
ATG3-202ENST00000402314 TERF2IPQ9NYB0 399 aa17.95■□□□□ 0.46
ATG3-202ENST00000402314 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
ATG3-202ENST00000402314 ABCC11Q96J66 1382 aa17.95■□□□□ 0.46
ATG3-202ENST00000402314 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
ATG3-202ENST00000402314 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
ATG3-202ENST00000402314 PTPRMP28827 1452 aa17.94■□□□□ 0.46
ATG3-202ENST00000402314 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
ATG3-202ENST00000402314 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
ATG3-202ENST00000402314 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
ATG3-202ENST00000402314 PUS7Q96PZ0 661 aaKnown RBP17.93■□□□□ 0.46
ATG3-202ENST00000402314 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
ATG3-202ENST00000402314 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
ATG3-202ENST00000402314 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
ATG3-202ENST00000402314 RIPK4P57078 832 aa17.92■□□□□ 0.46
ATG3-202ENST00000402314 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
ATG3-202ENST00000402314 SMC4Q9NTJ3 1288 aa17.91■□□□□ 0.46
ATG3-202ENST00000402314 BECN1Q14457 450 aa17.91■□□□□ 0.46
ATG3-202ENST00000402314 CD163L1Q9NR16 1453 aa17.91■□□□□ 0.46
ATG3-202ENST00000402314 HMOX1P09601 288 aa17.9■□□□□ 0.46
ATG3-202ENST00000402314 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
ATG3-202ENST00000402314 SSH1Q8WYL5 1049 aa17.9■□□□□ 0.46
ATG3-202ENST00000402314 NSD2O96028 1365 aa17.9■□□□□ 0.46
ATG3-202ENST00000402314 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
ATG3-202ENST00000402314 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
ATG3-202ENST00000402314 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
ATG3-202ENST00000402314 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
ATG3-202ENST00000402314 FTSJ3Q8IY81 847 aaKnown RBP17.89■□□□□ 0.45
ATG3-202ENST00000402314 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
ATG3-202ENST00000402314 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
ATG3-202ENST00000402314 ATAD2Q6PL18 1390 aa17.89■□□□□ 0.45
ATG3-202ENST00000402314 TSPOAP1O95153 1857 aa17.89■□□□□ 0.45
ATG3-202ENST00000402314 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
ATG3-202ENST00000402314 TXNDC2Q86VQ3 553 aa17.88■□□□□ 0.45
ATG3-202ENST00000402314 GOLGA6L3A6NEY3 463 aa17.87■□□□□ 0.45
ATG3-202ENST00000402314 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
ATG3-202ENST00000402314 TBC1D2Q9BYX2 928 aa17.87■□□□□ 0.45
ATG3-202ENST00000402314 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
ATG3-202ENST00000402314 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
ATG3-202ENST00000402314 TRIM27P14373 513 aa17.87■□□□□ 0.45
ATG3-202ENST00000402314 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
ATG3-202ENST00000402314 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
ATG3-202ENST00000402314 PHACTR3Q96KR7 559 aa17.86■□□□□ 0.45
ATG3-202ENST00000402314 ZMYND15Q9H091 742 aa17.86■□□□□ 0.45
ATG3-202ENST00000402314 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
ATG3-202ENST00000402314 MVPQ14764 893 aaKnown RBP17.85■□□□□ 0.45
ATG3-202ENST00000402314 NME9Q86XW9 330 aa17.85■□□□□ 0.45
ATG3-202ENST00000402314 ITPRIPQ8IWB1 547 aa17.85■□□□□ 0.45
ATG3-202ENST00000402314 POLKQ9UBT6 870 aa17.85■□□□□ 0.45
ATG3-202ENST00000402314 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
ATG3-202ENST00000402314 NLRP1Q9C000 1473 aa17.85■□□□□ 0.45
ATG3-202ENST00000402314 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
ATG3-202ENST00000402314 L1TD1Q5T7N2 865 aaKnown RBP17.85■□□□□ 0.45
ATG3-202ENST00000402314 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
ATG3-202ENST00000402314 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
ATG3-202ENST00000402314 PMFBP1Q8TBY8 1022 aa17.84■□□□□ 0.45
ATG3-202ENST00000402314 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
ATG3-202ENST00000402314 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.45
ATG3-202ENST00000402314 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
ATG3-202ENST00000402314 ARHGEF40Q8TER5 1519 aa17.82■□□□□ 0.44
ATG3-202ENST00000402314 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
ATG3-202ENST00000402314 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
ATG3-202ENST00000402314 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
ATG3-202ENST00000402314 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
ATG3-202ENST00000402314 ANTXR1Q9H6X2 564 aa17.81■□□□□ 0.44
ATG3-202ENST00000402314 RIMS2Q9UQ26 1411 aa17.81■□□□□ 0.44
ATG3-202ENST00000402314 METP08581 1390 aa17.81■□□□□ 0.44
ATG3-202ENST00000402314 HSP90AA1P07900 732 aaKnown RBP17.8■□□□□ 0.44
ATG3-202ENST00000402314 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
ATG3-202ENST00000402314 A2ML1A8K2U0 1454 aa17.79■□□□□ 0.44
ATG3-202ENST00000402314 ATF7IPQ6VMQ6 1270 aa17.79■□□□□ 0.44
ATG3-202ENST00000402314 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
ATG3-202ENST00000402314 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
ATG3-202ENST00000402314 MCM4P33991 863 aa17.78■□□□□ 0.44
ATG3-202ENST00000402314 GLIPR1L2Q4G1C9 344 aa17.78■□□□□ 0.44
ATG3-202ENST00000402314 TRAK2O60296 914 aa17.77■□□□□ 0.44
ATG3-202ENST00000402314 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
ATG3-202ENST00000402314 WASLO00401 505 aaPredicted RBP17.77■□□□□ 0.44
ATG3-202ENST00000402314 SOX12O15370 315 aa17.77■□□□□ 0.43
ATG3-202ENST00000402314 ESF1Q9H501 851 aaKnown RBP17.77■□□□□ 0.43
ATG3-202ENST00000402314 PNPLA6Q8IY17 1366 aa17.76■□□□□ 0.43
ATG3-202ENST00000402314 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
ATG3-202ENST00000402314 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
ATG3-202ENST00000402314 FCHSD2O94868 740 aa17.76■□□□□ 0.43
ATG3-202ENST00000402314 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
ATG3-202ENST00000402314 CLTCQ00610 1675 aaKnown RBP17.75■□□□□ 0.43
ATG3-202ENST00000402314 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
ATG3-202ENST00000402314 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
ATG3-202ENST00000402314 ERBB4Q15303 1308 aa17.74■□□□□ 0.43
ATG3-202ENST00000402314 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
ATG3-202ENST00000402314 ARID3AQ99856 593 aa17.73■□□□□ 0.43
ATG3-202ENST00000402314 DIP2BQ9P265 1576 aa17.73■□□□□ 0.43
ATG3-202ENST00000402314 LRRC7Q96NW7 1537 aa17.73■□□□□ 0.43
ATG3-202ENST00000402314 DDX19BQ9UMR2 479 aa17.72■□□□□ 0.43
ATG3-202ENST00000402314 IL13P35225 146 aa17.72■□□□□ 0.43
ATG3-202ENST00000402314 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
ATG3-202ENST00000402314 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
ATG3-202ENST00000402314 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms