RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
CAPN11-201ENST00000398776 IQSEC2Q5JU85 1478 aa12.66□□□□□ -0.38
CAPN11-201ENST00000398776 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
CAPN11-201ENST00000398776 TERF2IPQ9NYB0 399 aa12.66□□□□□ -0.38
CAPN11-201ENST00000398776 STK26Q9P289 416 aa12.66□□□□□ -0.38
CAPN11-201ENST00000398776 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
CAPN11-201ENST00000398776 MTHFSP49914 203 aa12.65□□□□□ -0.38
CAPN11-201ENST00000398776 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
CAPN11-201ENST00000398776 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
CAPN11-201ENST00000398776 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
CAPN11-201ENST00000398776 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
CAPN11-201ENST00000398776 PDCL3Q9H2J4 239 aa12.64□□□□□ -0.39
CAPN11-201ENST00000398776 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
CAPN11-201ENST00000398776 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
CAPN11-201ENST00000398776 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
CAPN11-201ENST00000398776 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
CAPN11-201ENST00000398776 TPM2P07951 284 aa12.63□□□□□ -0.39
CAPN11-201ENST00000398776 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN11-201ENST00000398776 SAFB2Q14151 953 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN11-201ENST00000398776 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 WDR63Q8IWG1 891 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 NLRP1Q9C000 1473 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 NRXN3Q9Y4C0 1643 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 ZMYM3Q14202 1370 aa12.62□□□□□ -0.39
CAPN11-201ENST00000398776 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
CAPN11-201ENST00000398776 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
CAPN11-201ENST00000398776 ATP7BP35670 1465 aa12.61□□□□□ -0.39
CAPN11-201ENST00000398776 TNNT2P45379 298 aaPredicted RBP12.61□□□□□ -0.39
CAPN11-201ENST00000398776 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
CAPN11-201ENST00000398776 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
CAPN11-201ENST00000398776 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
CAPN11-201ENST00000398776 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
CAPN11-201ENST00000398776 SIRT1Q96EB6 747 aa12.6□□□□□ -0.39
CAPN11-201ENST00000398776 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
CAPN11-201ENST00000398776 GOLGA6L3A6NEY3 463 aa12.6□□□□□ -0.39
CAPN11-201ENST00000398776 SEC24BO95487 1268 aa12.6□□□□□ -0.39
CAPN11-201ENST00000398776 TCP11L2Q8N4U5 519 aa12.6□□□□□ -0.39
CAPN11-201ENST00000398776 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
CAPN11-201ENST00000398776 BECN1Q14457 450 aa12.59□□□□□ -0.39
CAPN11-201ENST00000398776 FYB1O15117 783 aa12.59□□□□□ -0.39
CAPN11-201ENST00000398776 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
CAPN11-201ENST00000398776 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.4
CAPN11-201ENST00000398776 TECPR2O15040 1411 aa12.58□□□□□ -0.4
CAPN11-201ENST00000398776 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
CAPN11-201ENST00000398776 USP19O94966 1318 aa12.58□□□□□ -0.4
CAPN11-201ENST00000398776 PDE3AQ14432 1141 aa12.58□□□□□ -0.4
CAPN11-201ENST00000398776 AAMPQ13685 434 aa12.57□□□□□ -0.4
CAPN11-201ENST00000398776 MLECQ14165 292 aa12.57□□□□□ -0.4
CAPN11-201ENST00000398776 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
CAPN11-201ENST00000398776 PNPLA6Q8IY17 1366 aa12.57□□□□□ -0.4
CAPN11-201ENST00000398776 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
CAPN11-201ENST00000398776 TNRQ92752 1358 aa12.56□□□□□ -0.4
CAPN11-201ENST00000398776 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
CAPN11-201ENST00000398776 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
CAPN11-201ENST00000398776 CPS1P31327 1500 aa12.56□□□□□ -0.4
CAPN11-201ENST00000398776 CDC42BPGQ6DT37 1551 aa12.56□□□□□ -0.4
CAPN11-201ENST00000398776 IGHDP01880 384 aa12.55□□□□□ -0.4
CAPN11-201ENST00000398776 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
CAPN11-201ENST00000398776 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
CAPN11-201ENST00000398776 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
CAPN11-201ENST00000398776 ANTXR1Q9H6X2 564 aa12.55□□□□□ -0.4
CAPN11-201ENST00000398776 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
CAPN11-201ENST00000398776 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
CAPN11-201ENST00000398776 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
CAPN11-201ENST00000398776 MRE11P49959 708 aa12.54□□□□□ -0.4
CAPN11-201ENST00000398776 MYH16Q9H6N6 1097 aa12.54□□□□□ -0.4
CAPN11-201ENST00000398776 ESPNB1AK53 854 aa12.54□□□□□ -0.4
CAPN11-201ENST00000398776 BCAR3O75815 825 aa12.54□□□□□ -0.4
CAPN11-201ENST00000398776 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
CAPN11-201ENST00000398776 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
CAPN11-201ENST00000398776 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
CAPN11-201ENST00000398776 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
CAPN11-201ENST00000398776 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
CAPN11-201ENST00000398776 FGD1P98174 961 aa12.53□□□□□ -0.4
CAPN11-201ENST00000398776 WAPLQ7Z5K2 1190 aa12.53□□□□□ -0.4
CAPN11-201ENST00000398776 METP08581 1390 aa12.53□□□□□ -0.4
CAPN11-201ENST00000398776 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
CAPN11-201ENST00000398776 EDC4Q6P2E9 1401 aaKnown RBP12.53□□□□□ -0.4
CAPN11-201ENST00000398776 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
CAPN11-201ENST00000398776 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.41
CAPN11-201ENST00000398776 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
CAPN11-201ENST00000398776 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
CAPN11-201ENST00000398776 IL16Q14005 1332 aa12.51□□□□□ -0.41
CAPN11-201ENST00000398776 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
CAPN11-201ENST00000398776 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
CAPN11-201ENST00000398776 AKAP12Q02952 1782 aa12.51□□□□□ -0.41
CAPN11-201ENST00000398776 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
CAPN11-201ENST00000398776 TERF1P54274 439 aa12.5□□□□□ -0.41
CAPN11-201ENST00000398776 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
CAPN11-201ENST00000398776 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
CAPN11-201ENST00000398776 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
CAPN11-201ENST00000398776 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
CAPN11-201ENST00000398776 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
CAPN11-201ENST00000398776 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
CAPN11-201ENST00000398776 ITSN1Q15811 1721 aa12.49□□□□□ -0.41
CAPN11-201ENST00000398776 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
CAPN11-201ENST00000398776 PLEKHG1Q9ULL1 1385 aa12.49□□□□□ -0.41
CAPN11-201ENST00000398776 FCHSD2O94868 740 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms