RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.89
PPM1F-202ENST00000397495 NGDNQ8NEJ9 315 aaKnown RBP20.58■□□□□ 0.89
PPM1F-202ENST00000397495 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
PPM1F-202ENST00000397495 NSD2O96028 1365 aa20.57■□□□□ 0.88
PPM1F-202ENST00000397495 FYB1O15117 783 aa20.57■□□□□ 0.88
PPM1F-202ENST00000397495 PPP2R1AP30153 589 aa20.57■□□□□ 0.88
PPM1F-202ENST00000397495 ATF3P18847 181 aa20.56■□□□□ 0.88
PPM1F-202ENST00000397495 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
PPM1F-202ENST00000397495 ESCO1Q5FWF5 840 aa20.56■□□□□ 0.88
PPM1F-202ENST00000397495 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
PPM1F-202ENST00000397495 POLR3AO14802 1390 aaPredicted RBP20.55■□□□□ 0.88
PPM1F-202ENST00000397495 USP6P35125 1406 aa20.55■□□□□ 0.88
PPM1F-202ENST00000397495 NRKQ7Z2Y5 1582 aa20.54■□□□□ 0.88
PPM1F-202ENST00000397495 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
PPM1F-202ENST00000397495 MSH6P52701 1360 aa20.54■□□□□ 0.88
PPM1F-202ENST00000397495 DCCP43146 1447 aa20.53■□□□□ 0.88
PPM1F-202ENST00000397495 NME9Q86XW9 330 aa20.52■□□□□ 0.88
PPM1F-202ENST00000397495 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
PPM1F-202ENST00000397495 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
PPM1F-202ENST00000397495 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
PPM1F-202ENST00000397495 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
PPM1F-202ENST00000397495 BLMP54132 1417 aaPredicted RBP20.5■□□□□ 0.87
PPM1F-202ENST00000397495 MST1RQ04912 1400 aa20.5■□□□□ 0.87
PPM1F-202ENST00000397495 ZRANB1Q9UGI0 708 aa20.49■□□□□ 0.87
PPM1F-202ENST00000397495 NUDCQ9Y266 331 aa20.49■□□□□ 0.87
PPM1F-202ENST00000397495 SSH2Q76I76 1423 aa20.48■□□□□ 0.87
PPM1F-202ENST00000397495 RNF123Q5XPI4 1314 aa20.47■□□□□ 0.87
PPM1F-202ENST00000397495 LTBP4Q8N2S1 1624 aa20.46■□□□□ 0.87
PPM1F-202ENST00000397495 COG3Q96JB2 828 aa20.46■□□□□ 0.87
PPM1F-202ENST00000397495 KIF1AQ12756 1690 aa20.45■□□□□ 0.87
PPM1F-202ENST00000397495 FOXO3O43524 673 aa20.45■□□□□ 0.86
PPM1F-202ENST00000397495 PSME1Q06323 249 aa20.45■□□□□ 0.86
PPM1F-202ENST00000397495 TTC21AQ8NDW8 1320 aa20.45■□□□□ 0.86
PPM1F-202ENST00000397495 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
PPM1F-202ENST00000397495 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
PPM1F-202ENST00000397495 MTHFSP49914 203 aa20.43■□□□□ 0.86
PPM1F-202ENST00000397495 PIK3C2AO00443 1686 aa20.43■□□□□ 0.86
PPM1F-202ENST00000397495 XPCQ01831 940 aaPredicted RBP20.42■□□□□ 0.86
PPM1F-202ENST00000397495 MAP2P11137 1827 aaKnown RBP20.41■□□□□ 0.86
PPM1F-202ENST00000397495 FBLN1P23142 703 aa20.41■□□□□ 0.86
PPM1F-202ENST00000397495 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
PPM1F-202ENST00000397495 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
PPM1F-202ENST00000397495 NUTM2GQ5VZR2 741 aa20.39■□□□□ 0.86
PPM1F-202ENST00000397495 SLAIN2Q9P270 581 aa20.39■□□□□ 0.86
PPM1F-202ENST00000397495 ABTB2Q8N961 1025 aa20.39■□□□□ 0.85
PPM1F-202ENST00000397495 NLRP6P59044 892 aa20.38■□□□□ 0.85
PPM1F-202ENST00000397495 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
PPM1F-202ENST00000397495 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
PPM1F-202ENST00000397495 CERKQ8TCT0 537 aa20.36■□□□□ 0.85
PPM1F-202ENST00000397495 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
PPM1F-202ENST00000397495 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
PPM1F-202ENST00000397495 SOX12O15370 315 aa20.36■□□□□ 0.85
PPM1F-202ENST00000397495 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
PPM1F-202ENST00000397495 BRINP3Q76B58 766 aa20.36■□□□□ 0.85
PPM1F-202ENST00000397495 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
PPM1F-202ENST00000397495 TRPM3Q9HCF6 1732 aaPredicted RBP20.36■□□□□ 0.85
PPM1F-202ENST00000397495 MARF1Q9Y4F3 1742 aaKnown RBP20.36■□□□□ 0.85
PPM1F-202ENST00000397495 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
PPM1F-202ENST00000397495 RRS1Q15050 365 aaKnown RBP20.34■□□□□ 0.85
PPM1F-202ENST00000397495 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
PPM1F-202ENST00000397495 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
PPM1F-202ENST00000397495 EMILIN1Q9Y6C2 1016 aa20.34■□□□□ 0.85
PPM1F-202ENST00000397495 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
PPM1F-202ENST00000397495 SHPRHQ149N8 1683 aa20.33■□□□□ 0.84
PPM1F-202ENST00000397495 USP54Q70EL1 1684 aa20.33■□□□□ 0.84
PPM1F-202ENST00000397495 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.84
PPM1F-202ENST00000397495 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.84
PPM1F-202ENST00000397495 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
PPM1F-202ENST00000397495 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
PPM1F-202ENST00000397495 PLEKHG5O94827 1062 aa20.29■□□□□ 0.84
PPM1F-202ENST00000397495 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
PPM1F-202ENST00000397495 COL3A1P02461 1466 aaPredicted RBP20.29■□□□□ 0.84
PPM1F-202ENST00000397495 PXDNQ92626 1479 aa20.28■□□□□ 0.84
PPM1F-202ENST00000397495 PNPLA6Q8IY17 1366 aa20.28■□□□□ 0.84
PPM1F-202ENST00000397495 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
PPM1F-202ENST00000397495 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
PPM1F-202ENST00000397495 CDK12Q9NYV4 1490 aaPredicted RBP20.26■□□□□ 0.83
PPM1F-202ENST00000397495 DIAPH1O60610 1272 aaKnown RBP20.26■□□□□ 0.83
PPM1F-202ENST00000397495 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
PPM1F-202ENST00000397495 SBNO1A3KN83 1393 aa20.26■□□□□ 0.83
PPM1F-202ENST00000397495 PEAK1Q9H792 1746 aa20.25■□□□□ 0.83
PPM1F-202ENST00000397495 MAP3K19Q56UN5 1328 aa20.25■□□□□ 0.83
PPM1F-202ENST00000397495 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
PPM1F-202ENST00000397495 UBAP1LF5GYI3 381 aa20.24■□□□□ 0.83
PPM1F-202ENST00000397495 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
PPM1F-202ENST00000397495 TOM1O60784 492 aa20.24■□□□□ 0.83
PPM1F-202ENST00000397495 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
PPM1F-202ENST00000397495 NHSL1Q5SYE7 1610 aa20.23■□□□□ 0.83
PPM1F-202ENST00000397495 ROBO1Q9Y6N7 1651 aa20.23■□□□□ 0.83
PPM1F-202ENST00000397495 U2AF1L5P0DN76 240 aaPredicted RBP20.23■□□□□ 0.83
PPM1F-202ENST00000397495 U2AF1Q01081 240 aaKnown RBP eCLIP20.23■□□□□ 0.83
PPM1F-202ENST00000397495 CCDC146Q8IYE0 955 aa20.23■□□□□ 0.83
PPM1F-202ENST00000397495 LTN1O94822 1766 aa20.23■□□□□ 0.83
PPM1F-202ENST00000397495 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
PPM1F-202ENST00000397495 NFAT5O94916 1531 aa20.21■□□□□ 0.83
PPM1F-202ENST00000397495 AMPHP49418 695 aa20.21■□□□□ 0.83
PPM1F-202ENST00000397495 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
PPM1F-202ENST00000397495 SOS2Q07890 1332 aaPredicted RBP20.21■□□□□ 0.83
PPM1F-202ENST00000397495 USP19O94966 1318 aa20.2■□□□□ 0.82
PPM1F-202ENST00000397495 SLIT3O75094 1523 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms