RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.53□□□□□ -0.24
TUBB-208ENST00000396389 ACEP12821 1306 aa13.52□□□□□ -0.24
TUBB-208ENST00000396389 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.24
TUBB-208ENST00000396389 SMG6Q86US8 1419 aaKnown RBP13.52□□□□□ -0.25
TUBB-208ENST00000396389 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
TUBB-208ENST00000396389 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
TUBB-208ENST00000396389 A0A1W2PP64 1363 aa13.51□□□□□ -0.25
TUBB-208ENST00000396389 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 PKNOX2Q96KN3 472 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 MSH6P52701 1360 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
TUBB-208ENST00000396389 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 PSME1Q06323 249 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 NME9Q86XW9 330 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 CPS1P31327 1500 aa13.5□□□□□ -0.25
TUBB-208ENST00000396389 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
TUBB-208ENST00000396389 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
TUBB-208ENST00000396389 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
TUBB-208ENST00000396389 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
TUBB-208ENST00000396389 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
TUBB-208ENST00000396389 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
TUBB-208ENST00000396389 SLAIN2Q9P270 581 aa13.48□□□□□ -0.25
TUBB-208ENST00000396389 CHD2O14647 1828 aaKnown RBP13.48□□□□□ -0.25
TUBB-208ENST00000396389 DLC1Q96QB1 1528 aa13.48□□□□□ -0.25
TUBB-208ENST00000396389 ADGRL3Q9HAR2 1447 aa13.48□□□□□ -0.25
TUBB-208ENST00000396389 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
TUBB-208ENST00000396389 XRN1Q8IZH2 1706 aaKnown RBP13.48□□□□□ -0.25
TUBB-208ENST00000396389 LRRC7Q96NW7 1537 aa13.48□□□□□ -0.25
TUBB-208ENST00000396389 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
TUBB-208ENST00000396389 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
TUBB-208ENST00000396389 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
TUBB-208ENST00000396389 PLIN1O60240 522 aa13.46□□□□□ -0.25
TUBB-208ENST00000396389 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.25
TUBB-208ENST00000396389 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
TUBB-208ENST00000396389 ATP7BP35670 1465 aa13.46□□□□□ -0.26
TUBB-208ENST00000396389 CABLES1Q8TDN4 633 aa13.44□□□□□ -0.26
TUBB-208ENST00000396389 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
TUBB-208ENST00000396389 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
TUBB-208ENST00000396389 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
TUBB-208ENST00000396389 FRAT1Q92837 279 aaPredicted RBP13.44□□□□□ -0.26
TUBB-208ENST00000396389 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
TUBB-208ENST00000396389 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
TUBB-208ENST00000396389 BRINP3Q76B58 766 aa13.43□□□□□ -0.26
TUBB-208ENST00000396389 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
TUBB-208ENST00000396389 FYB1O15117 783 aa13.43□□□□□ -0.26
TUBB-208ENST00000396389 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
TUBB-208ENST00000396389 GSE1Q14687 1217 aa13.43□□□□□ -0.26
TUBB-208ENST00000396389 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
TUBB-208ENST00000396389 NLRP6P59044 892 aa13.42□□□□□ -0.26
TUBB-208ENST00000396389 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
TUBB-208ENST00000396389 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
TUBB-208ENST00000396389 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
TUBB-208ENST00000396389 KRT28Q7Z3Y7 464 aa13.41□□□□□ -0.26
TUBB-208ENST00000396389 CGNL1Q0VF96 1302 aa13.41□□□□□ -0.26
TUBB-208ENST00000396389 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
TUBB-208ENST00000396389 C1orf167Q5SNV9 1468 aa13.41□□□□□ -0.26
TUBB-208ENST00000396389 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
TUBB-208ENST00000396389 RGPD8O14715 1765 aaPredicted RBP13.4□□□□□ -0.26
TUBB-208ENST00000396389 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
TUBB-208ENST00000396389 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.26
TUBB-208ENST00000396389 RCAN3Q9UKA8 241 aa13.4□□□□□ -0.27
TUBB-208ENST00000396389 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
TUBB-208ENST00000396389 PLEKHG3A1L390 1219 aa13.39□□□□□ -0.27
TUBB-208ENST00000396389 MST1RQ04912 1400 aa13.39□□□□□ -0.27
TUBB-208ENST00000396389 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
TUBB-208ENST00000396389 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
TUBB-208ENST00000396389 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
TUBB-208ENST00000396389 MYOM1P52179 1685 aa13.37□□□□□ -0.27
TUBB-208ENST00000396389 COG3Q96JB2 828 aa13.37□□□□□ -0.27
TUBB-208ENST00000396389 USP32Q8NFA0 1604 aa13.37□□□□□ -0.27
TUBB-208ENST00000396389 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
TUBB-208ENST00000396389 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
TUBB-208ENST00000396389 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
TUBB-208ENST00000396389 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
TUBB-208ENST00000396389 LTV1Q96GA3 475 aaPredicted RBP13.36□□□□□ -0.27
TUBB-208ENST00000396389 TOM1O60784 492 aa13.35□□□□□ -0.27
TUBB-208ENST00000396389 USP6P35125 1406 aa13.35□□□□□ -0.27
TUBB-208ENST00000396389 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
TUBB-208ENST00000396389 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
TUBB-208ENST00000396389 MTHFSP49914 203 aa13.35□□□□□ -0.27
TUBB-208ENST00000396389 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
TUBB-208ENST00000396389 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
TUBB-208ENST00000396389 FRAT2O75474 233 aaPredicted RBP13.34□□□□□ -0.27
TUBB-208ENST00000396389 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
TUBB-208ENST00000396389 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
TUBB-208ENST00000396389 CPSF1Q10570 1443 aaKnown RBP13.34□□□□□ -0.27
TUBB-208ENST00000396389 CDC42BPGQ6DT37 1551 aa13.33□□□□□ -0.27
TUBB-208ENST00000396389 CRBNQ96SW2 442 aa13.33□□□□□ -0.27
TUBB-208ENST00000396389 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
TUBB-208ENST00000396389 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
TUBB-208ENST00000396389 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
TUBB-208ENST00000396389 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
TUBB-208ENST00000396389 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
TUBB-208ENST00000396389 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
TUBB-208ENST00000396389 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
TUBB-208ENST00000396389 HOMEZQ8IX15 550 aa13.31□□□□□ -0.28
TUBB-208ENST00000396389 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
TUBB-208ENST00000396389 FMN2Q9NZ56 1722 aa13.31□□□□□ -0.28
TUBB-208ENST00000396389 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms