RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PTPRMP28827 1452 aa27.46■■□□□ 1.99
CLDND1-202ENST00000394180 NCOA3Q9Y6Q9 1424 aa27.46■■□□□ 1.99
CLDND1-202ENST00000394180 CLUAP1Q96AJ1 413 aa27.45■■□□□ 1.99
CLDND1-202ENST00000394180 SLC24A1O60721 1099 aa27.45■■□□□ 1.98
CLDND1-202ENST00000394180 GZF1Q9H116 711 aaPredicted RBP27.45■■□□□ 1.98
CLDND1-202ENST00000394180 MYO3AQ8NEV4 1616 aa27.44■■□□□ 1.98
CLDND1-202ENST00000394180 CIZ1Q9ULV3 898 aaPredicted RBP27.44■■□□□ 1.98
CLDND1-202ENST00000394180 C14orf93Q9H972 538 aaKnown RBP27.44■■□□□ 1.98
CLDND1-202ENST00000394180 ZFYVE9O95405 1425 aa27.44■■□□□ 1.98
CLDND1-202ENST00000394180 IBTKQ9P2D0 1353 aaPredicted RBP27.43■■□□□ 1.98
CLDND1-202ENST00000394180 TMEM132EQ6IEE7 984 aa27.43■■□□□ 1.98
CLDND1-202ENST00000394180 TMEM2Q9UHN6 1383 aa27.42■■□□□ 1.98
CLDND1-202ENST00000394180 KIAA1210Q9ULL0 1709 aa27.41■■□□□ 1.98
CLDND1-202ENST00000394180 KDM5AP29375 1690 aaKnown RBP27.4■■□□□ 1.98
CLDND1-202ENST00000394180 WDR43Q15061 677 aaKnown RBP eCLIP27.4■■□□□ 1.98
CLDND1-202ENST00000394180 E9PSI1 815 aa27.39■■□□□ 1.97
CLDND1-202ENST00000394180 DDIT3P35638 169 aa27.39■■□□□ 1.97
CLDND1-202ENST00000394180 ZNF692Q9BU19 519 aaPredicted RBP27.38■■□□□ 1.97
CLDND1-202ENST00000394180 LTKP29376 864 aa27.37■■□□□ 1.97
CLDND1-202ENST00000394180 RIPK4P57078 832 aa27.37■■□□□ 1.97
CLDND1-202ENST00000394180 UTP14CQ5TAP6 766 aaKnown RBP27.37■■□□□ 1.97
CLDND1-202ENST00000394180 ARXQ96QS3 562 aa27.37■■□□□ 1.97
CLDND1-202ENST00000394180 KDM4FA0A1W2PPD8 638 aa27.36■■□□□ 1.97
CLDND1-202ENST00000394180 CEP170BQ9Y4F5 1589 aaPredicted RBP27.36■■□□□ 1.97
CLDND1-202ENST00000394180 GBP4Q96PP9 640 aa27.36■■□□□ 1.97
CLDND1-202ENST00000394180 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.35■■□□□ 1.97
CLDND1-202ENST00000394180 SCAF11Q99590 1463 aaKnown RBP27.34■■□□□ 1.97
CLDND1-202ENST00000394180 ADGRB1O14514 1584 aa27.34■■□□□ 1.97
CLDND1-202ENST00000394180 CC2D1BQ5T0F9 858 aaKnown RBP27.34■■□□□ 1.97
CLDND1-202ENST00000394180 THEMISQ8N1K5 641 aaPredicted RBP27.34■■□□□ 1.97
CLDND1-202ENST00000394180 ANP32BQ92688 251 aaKnown RBP27.34■■□□□ 1.97
CLDND1-202ENST00000394180 NCLP19338 710 aaKnown RBP27.33■■□□□ 1.97
CLDND1-202ENST00000394180 FGD1P98174 961 aa27.33■■□□□ 1.97
CLDND1-202ENST00000394180 IQGAP1P46940 1657 aa27.33■■□□□ 1.97
CLDND1-202ENST00000394180 TXNDC2Q86VQ3 553 aa27.33■■□□□ 1.97
CLDND1-202ENST00000394180 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
CLDND1-202ENST00000394180 PANK3Q9H999 370 aa27.32■■□□□ 1.96
CLDND1-202ENST00000394180 TRAK1Q9UPV9 953 aa27.32■■□□□ 1.96
CLDND1-202ENST00000394180 MSNP26038 577 aaKnown RBP27.32■■□□□ 1.96
CLDND1-202ENST00000394180 SNX21Q969T3 373 aa27.32■■□□□ 1.96
CLDND1-202ENST00000394180 SETBP1Q9Y6X0 1596 aa27.31■■□□□ 1.96
CLDND1-202ENST00000394180 NPC1L1Q9UHC9 1359 aa27.31■■□□□ 1.96
CLDND1-202ENST00000394180 ZNF500O60304 480 aaPredicted RBP27.31■■□□□ 1.96
CLDND1-202ENST00000394180 HDGFP51858 240 aaKnown RBP27.31■■□□□ 1.96
CLDND1-202ENST00000394180 ALKQ9UM73 1620 aa27.3■■□□□ 1.96
CLDND1-202ENST00000394180 DYNC1I1O14576 645 aa27.3■■□□□ 1.96
CLDND1-202ENST00000394180 HSCBQ8IWL3 235 aa27.3■■□□□ 1.96
CLDND1-202ENST00000394180 TESK2Q96S53 571 aa27.3■■□□□ 1.96
CLDND1-202ENST00000394180 ASXL1Q8IXJ9 1541 aa27.29■■□□□ 1.96
CLDND1-202ENST00000394180 C22orf23Q9BZE7 217 aa27.29■■□□□ 1.96
CLDND1-202ENST00000394180 PPP2R1AP30153 589 aa27.28■■□□□ 1.96
CLDND1-202ENST00000394180 SMC5Q8IY18 1101 aa27.28■■□□□ 1.96
CLDND1-202ENST00000394180 SLIT1O75093 1534 aa27.28■■□□□ 1.96
CLDND1-202ENST00000394180 EID1Q9Y6B2 187 aa27.28■■□□□ 1.96
CLDND1-202ENST00000394180 ARHGAP23Q9P227 1491 aa27.27■■□□□ 1.96
CLDND1-202ENST00000394180 STK26Q9P289 416 aa27.27■■□□□ 1.96
CLDND1-202ENST00000394180 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
CLDND1-202ENST00000394180 MCM5P33992 734 aa27.26■■□□□ 1.96
CLDND1-202ENST00000394180 CSPP1Q1MSJ5 1256 aa27.26■■□□□ 1.96
CLDND1-202ENST00000394180 GAS2L3Q86XJ1 694 aa27.26■■□□□ 1.96
CLDND1-202ENST00000394180 TMF1P82094 1093 aa27.26■■□□□ 1.95
CLDND1-202ENST00000394180 DISP3Q9P2K9 1392 aa27.25■■□□□ 1.95
CLDND1-202ENST00000394180 ZNF142P52746 1687 aaPredicted RBP27.24■■□□□ 1.95
CLDND1-202ENST00000394180 BCAR3O75815 825 aa27.24■■□□□ 1.95
CLDND1-202ENST00000394180 CLEC17AQ6ZS10 378 aa27.24■■□□□ 1.95
CLDND1-202ENST00000394180 RWDD1Q9H446 243 aaPredicted RBP27.23■■□□□ 1.95
CLDND1-202ENST00000394180 NASPP49321 788 aaPredicted RBP27.22■■□□□ 1.95
CLDND1-202ENST00000394180 RAB3GAP1Q15042 981 aa27.22■■□□□ 1.95
CLDND1-202ENST00000394180 NOL7Q9UMY1 257 aaKnown RBP27.22■■□□□ 1.95
CLDND1-202ENST00000394180 METP08581 1390 aa27.21■■□□□ 1.95
CLDND1-202ENST00000394180 SETD1AO15047 1707 aaKnown RBP27.21■■□□□ 1.95
CLDND1-202ENST00000394180 SLC26A8Q96RN1 970 aa27.21■■□□□ 1.95
CLDND1-202ENST00000394180 PDZRN3Q9UPQ7 1066 aa27.21■■□□□ 1.95
CLDND1-202ENST00000394180 PLEKHG1Q9ULL1 1385 aa27.21■■□□□ 1.95
CLDND1-202ENST00000394180 TNPO1Q92973 898 aaKnown RBP27.19■■□□□ 1.94
CLDND1-202ENST00000394180 ADAMTS13Q76LX8 1427 aa27.18■■□□□ 1.94
CLDND1-202ENST00000394180 YTHDC2Q9H6S0 1430 aaKnown RBP27.18■■□□□ 1.94
CLDND1-202ENST00000394180 DMTNQ08495 405 aa27.18■■□□□ 1.94
CLDND1-202ENST00000394180 RBM25P49756 843 aaKnown RBP27.17■■□□□ 1.94
CLDND1-202ENST00000394180 SAFB2Q14151 953 aaKnown RBP eCLIP27.17■■□□□ 1.94
CLDND1-202ENST00000394180 FAM13BQ9NYF5 915 aa27.15■■□□□ 1.94
CLDND1-202ENST00000394180 KNSTRNQ9Y448 316 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 GOLGA6L22H0YM25 854 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 ZNF445P59923 1031 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 KLHL40Q2TBA0 621 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 ANKLE2Q86XL3 938 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 PDLIM2Q96JY6 352 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 COG6Q9Y2V7 657 aa27.14■■□□□ 1.94
CLDND1-202ENST00000394180 ARHGEF28Q8N1W1 1705 aaKnown RBP27.14■■□□□ 1.93
CLDND1-202ENST00000394180 AMER1Q5JTC6 1135 aaPredicted RBP27.13■■□□□ 1.93
CLDND1-202ENST00000394180 CCDC94Q9BW85 323 aaPredicted RBP27.12■■□□□ 1.93
CLDND1-202ENST00000394180 UQCRHLA0A096LP55 91 aa27.12■■□□□ 1.93
CLDND1-202ENST00000394180 UQCRHP07919 91 aa27.12■■□□□ 1.93
CLDND1-202ENST00000394180 CANXP27824 592 aaKnown RBP27.12■■□□□ 1.93
CLDND1-202ENST00000394180 SPRYD3Q8NCJ5 442 aa27.11■■□□□ 1.93
CLDND1-202ENST00000394180 SPINK5Q9NQ38 1064 aaPredicted RBP27.11■■□□□ 1.93
CLDND1-202ENST00000394180 R3HCC1Q9Y3T6 440 aaKnown RBP27.11■■□□□ 1.93
CLDND1-202ENST00000394180 PRAM1Q96QH2 718 aa27.1■■□□□ 1.93
CLDND1-202ENST00000394180 A0A0U1RQG5 324 aaPredicted RBP27.1■■□□□ 1.93
CLDND1-202ENST00000394180 SASS6Q6UVJ0 657 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms