RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CPS1P31327 1500 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 WDR63Q8IWG1 891 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
SMAD1-202ENST00000394092 COL3A1P02461 1466 aaPredicted RBP9.35□□□□□ -0.91
SMAD1-202ENST00000394092 NLRP1Q9C000 1473 aa9.35□□□□□ -0.91
SMAD1-202ENST00000394092 CDC42BPGQ6DT37 1551 aa9.35□□□□□ -0.91
SMAD1-202ENST00000394092 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
SMAD1-202ENST00000394092 PNNQ9H307 717 aaKnown RBP9.35□□□□□ -0.91
SMAD1-202ENST00000394092 MON2Q7Z3U7 1717 aa9.34□□□□□ -0.91
SMAD1-202ENST00000394092 ZMYM3Q14202 1370 aa9.34□□□□□ -0.91
SMAD1-202ENST00000394092 TECPR2O15040 1411 aa9.34□□□□□ -0.91
SMAD1-202ENST00000394092 FAM135BQ49AJ0 1406 aa9.34□□□□□ -0.91
SMAD1-202ENST00000394092 AKAP12Q02952 1782 aa9.33□□□□□ -0.92
SMAD1-202ENST00000394092 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
SMAD1-202ENST00000394092 CDK19Q9BWU1 502 aa9.33□□□□□ -0.92
SMAD1-202ENST00000394092 TNRQ92752 1358 aa9.33□□□□□ -0.92
SMAD1-202ENST00000394092 U2AF1L5P0DN76 240 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 KCNA4P22459 653 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 U2AF1Q01081 240 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 AAMPQ13685 434 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 MLECQ14165 292 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 CT47B1P0C2W7 299 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 CANXP27824 592 aaKnown RBP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 C20orf194Q5TEA3 1177 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 VIRMAQ69YN4 1812 aaKnown RBP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 EDC4Q6P2E9 1401 aaKnown RBP9.32□□□□□ -0.92
SMAD1-202ENST00000394092 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 SIRT1Q96EB6 747 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
SMAD1-202ENST00000394092 GGNBP2Q9H3C7 697 aa9.31□□□□□ -0.92
SMAD1-202ENST00000394092 FYB1O15117 783 aa9.3□□□□□ -0.92
SMAD1-202ENST00000394092 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMAD1-202ENST00000394092 ZBTB12Q9Y330 459 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-202ENST00000394092 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
SMAD1-202ENST00000394092 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 NOP58Q9Y2X3 529 aaKnown RBP9.29□□□□□ -0.92
SMAD1-202ENST00000394092 PPIP5K1Q6PFW1 1433 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 FER1L4A9Z1Z3 1794 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 TMEM2Q9UHN6 1383 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 C3P01024 1663 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 IL16Q14005 1332 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 PITPNM1O00562 1244 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 BCAR3O75815 825 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 MYCNP04198 464 aaPredicted RBP9.29□□□□□ -0.92
SMAD1-202ENST00000394092 NEFMP07197 916 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 PDE4AP27815 886 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 IPO9Q96P70 1041 aaKnown RBP9.29□□□□□ -0.92
SMAD1-202ENST00000394092 BACH2Q9BYV9 841 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 RRP7AQ9Y3A4 280 aaKnown RBP9.29□□□□□ -0.92
SMAD1-202ENST00000394092 LRRC7Q96NW7 1537 aa9.29□□□□□ -0.92
SMAD1-202ENST00000394092 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-202ENST00000394092 CPSF1Q10570 1443 aaKnown RBP9.28□□□□□ -0.92
SMAD1-202ENST00000394092 TOPAZ1Q8N9V7 1692 aa9.28□□□□□ -0.92
SMAD1-202ENST00000394092 WASLO00401 505 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-202ENST00000394092 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
SMAD1-202ENST00000394092 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
SMAD1-202ENST00000394092 PLEKHG1Q9ULL1 1385 aa9.27□□□□□ -0.92
SMAD1-202ENST00000394092 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
SMAD1-202ENST00000394092 DIP2AQ14689 1571 aa9.27□□□□□ -0.93
SMAD1-202ENST00000394092 METP08581 1390 aa9.27□□□□□ -0.93
SMAD1-202ENST00000394092 AATKQ6ZMQ8 1374 aa9.27□□□□□ -0.93
SMAD1-202ENST00000394092 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
SMAD1-202ENST00000394092 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
SMAD1-202ENST00000394092 PLEKHF1Q96S99 279 aa9.26□□□□□ -0.93
SMAD1-202ENST00000394092 NRKQ7Z2Y5 1582 aa9.26□□□□□ -0.93
SMAD1-202ENST00000394092 TMPOP42166 694 aaKnown RBP9.26□□□□□ -0.93
SMAD1-202ENST00000394092 EVX2Q03828 476 aa9.26□□□□□ -0.93
SMAD1-202ENST00000394092 ZBTB47Q9UFB7 747 aaPredicted RBP9.26□□□□□ -0.93
SMAD1-202ENST00000394092 RIMS1Q86UR5 1692 aaKnown RBP9.25□□□□□ -0.93
SMAD1-202ENST00000394092 FCHSD2O94868 740 aa9.25□□□□□ -0.93
SMAD1-202ENST00000394092 PMFBP1Q8TBY8 1022 aa9.25□□□□□ -0.93
SMAD1-202ENST00000394092 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
SMAD1-202ENST00000394092 SLIT1O75093 1534 aa9.25□□□□□ -0.93
SMAD1-202ENST00000394092 ADAMTS13Q76LX8 1427 aa9.24□□□□□ -0.93
SMAD1-202ENST00000394092 CALD1Q05682 793 aaKnown RBP9.24□□□□□ -0.93
SMAD1-202ENST00000394092 FRAT1Q92837 279 aaPredicted RBP9.24□□□□□ -0.93
SMAD1-202ENST00000394092 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
SMAD1-202ENST00000394092 CCDC61Q9Y6R9 512 aa9.24□□□□□ -0.93
SMAD1-202ENST00000394092 NALCNQ8IZF0 1738 aa9.24□□□□□ -0.93
SMAD1-202ENST00000394092 FAM161AQ3B820 660 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMAD1-202ENST00000394092 NUDT16Q96DE0 195 aaKnown RBP9.23□□□□□ -0.93
SMAD1-202ENST00000394092 COG3Q96JB2 828 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.23□□□□□ -0.93
SMAD1-202ENST00000394092 DLG5Q8TDM6 1919 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 ZKSCAN2Q63HK3 967 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 COG6Q9Y2V7 657 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
SMAD1-202ENST00000394092 ARHGAP23Q9P227 1491 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 KIF16BQ96L93 1317 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 RIPK4P57078 832 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
SMAD1-202ENST00000394092 FTSJ3Q8IY81 847 aaKnown RBP9.22□□□□□ -0.93
SMAD1-202ENST00000394092 PANK1Q8TE04 598 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms