RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 CHMP5Q9NZZ3 219 aa20.46■□□□□ 0.87
TRA2A-202ENST00000392502 CHRM1P11229 460 aaPredicted RBP20.45■□□□□ 0.86
TRA2A-202ENST00000392502 PIK3C2BO00750 1634 aa20.45■□□□□ 0.86
TRA2A-202ENST00000392502 CARD14Q9BXL6 1004 aa20.45■□□□□ 0.86
TRA2A-202ENST00000392502 SIGLEC1Q9BZZ2 1709 aa20.44■□□□□ 0.86
TRA2A-202ENST00000392502 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
TRA2A-202ENST00000392502 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
TRA2A-202ENST00000392502 TRAK1Q9UPV9 953 aa20.43■□□□□ 0.86
TRA2A-202ENST00000392502 MCM5P33992 734 aa20.43■□□□□ 0.86
TRA2A-202ENST00000392502 SLC20A2Q08357 652 aa20.43■□□□□ 0.86
TRA2A-202ENST00000392502 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-202ENST00000392502 GZF1Q9H116 711 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-202ENST00000392502 CDK11BP21127 795 aaKnown RBP20.42■□□□□ 0.86
TRA2A-202ENST00000392502 R3HCC1Q9Y3T6 440 aaKnown RBP20.42■□□□□ 0.86
TRA2A-202ENST00000392502 UPF2Q9HAU5 1272 aaKnown RBP20.42■□□□□ 0.86
TRA2A-202ENST00000392502 PIK3C2GO75747 1445 aa20.42■□□□□ 0.86
TRA2A-202ENST00000392502 ARHGAP31Q2M1Z3 1444 aa20.42■□□□□ 0.86
TRA2A-202ENST00000392502 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
TRA2A-202ENST00000392502 WDR43Q15061 677 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRA2A-202ENST00000392502 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
TRA2A-202ENST00000392502 PLEKHH1Q9ULM0 1364 aa20.4■□□□□ 0.86
TRA2A-202ENST00000392502 SASS6Q6UVJ0 657 aa20.4■□□□□ 0.86
TRA2A-202ENST00000392502 PLIN1O60240 522 aa20.39■□□□□ 0.86
TRA2A-202ENST00000392502 ZNF830Q96NB3 372 aaPredicted RBP20.39■□□□□ 0.86
TRA2A-202ENST00000392502 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.86
TRA2A-202ENST00000392502 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.85
TRA2A-202ENST00000392502 PRDM10Q9NQV6 1147 aa20.39■□□□□ 0.85
TRA2A-202ENST00000392502 MAPK8IP3Q9UPT6 1336 aa20.39■□□□□ 0.85
TRA2A-202ENST00000392502 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
TRA2A-202ENST00000392502 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
TRA2A-202ENST00000392502 IBTKQ9P2D0 1353 aaPredicted RBP20.37■□□□□ 0.85
TRA2A-202ENST00000392502 NOL7Q9UMY1 257 aaKnown RBP20.37■□□□□ 0.85
TRA2A-202ENST00000392502 REREQ9P2R6 1566 aa20.36■□□□□ 0.85
TRA2A-202ENST00000392502 CCDC146Q8IYE0 955 aa20.36■□□□□ 0.85
TRA2A-202ENST00000392502 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.36■□□□□ 0.85
TRA2A-202ENST00000392502 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
TRA2A-202ENST00000392502 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
TRA2A-202ENST00000392502 QRICH2Q9H0J4 1663 aa20.35■□□□□ 0.85
TRA2A-202ENST00000392502 SKAP1Q86WV1 359 aa20.34■□□□□ 0.85
TRA2A-202ENST00000392502 SLC12A5Q9H2X9 1139 aa20.33■□□□□ 0.85
TRA2A-202ENST00000392502 TBC1D2Q9BYX2 928 aa20.33■□□□□ 0.84
TRA2A-202ENST00000392502 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
TRA2A-202ENST00000392502 DNTTIP2Q5QJE6 756 aaKnown RBP20.31■□□□□ 0.84
TRA2A-202ENST00000392502 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
TRA2A-202ENST00000392502 IDI1Q13907 227 aa20.31■□□□□ 0.84
TRA2A-202ENST00000392502 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
TRA2A-202ENST00000392502 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
TRA2A-202ENST00000392502 ZFP91Q96JP5 570 aaPredicted RBP20.3■□□□□ 0.84
TRA2A-202ENST00000392502 TBC1D32Q96NH3 1257 aa20.3■□□□□ 0.84
TRA2A-202ENST00000392502 DNAJC2Q99543 621 aaKnown RBP20.3■□□□□ 0.84
TRA2A-202ENST00000392502 NSD3Q9BZ95 1437 aa20.29■□□□□ 0.84
TRA2A-202ENST00000392502 PREX1Q8TCU6 1659 aa20.28■□□□□ 0.84
TRA2A-202ENST00000392502 IRX3P78415 501 aaPredicted RBP20.28■□□□□ 0.84
TRA2A-202ENST00000392502 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
TRA2A-202ENST00000392502 ZFYVE9O95405 1425 aa20.28■□□□□ 0.84
TRA2A-202ENST00000392502 APAF1O14727 1248 aa20.27■□□□□ 0.84
TRA2A-202ENST00000392502 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
TRA2A-202ENST00000392502 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
TRA2A-202ENST00000392502 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
TRA2A-202ENST00000392502 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-202ENST00000392502 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-202ENST00000392502 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-202ENST00000392502 AGLP35573 1532 aa20.26■□□□□ 0.83
TRA2A-202ENST00000392502 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
TRA2A-202ENST00000392502 GOLGA2Q08379 1002 aa20.25■□□□□ 0.83
TRA2A-202ENST00000392502 HMGN5P82970 282 aaKnown RBP20.25■□□□□ 0.83
TRA2A-202ENST00000392502 SAFB2Q14151 953 aaKnown RBP eCLIP20.25■□□□□ 0.831e-8■■□□□ 12.9
TRA2A-202ENST00000392502 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
TRA2A-202ENST00000392502 GAS2L3Q86XJ1 694 aa20.24■□□□□ 0.83
TRA2A-202ENST00000392502 PRIMPOLQ96LW4 560 aa20.24■□□□□ 0.83
TRA2A-202ENST00000392502 MYRIPQ8NFW9 859 aa20.23■□□□□ 0.83
TRA2A-202ENST00000392502 NINLQ9Y2I6 1382 aa20.23■□□□□ 0.83
TRA2A-202ENST00000392502 SLFN5Q08AF3 891 aa20.23■□□□□ 0.83
TRA2A-202ENST00000392502 ZKSCAN5Q9Y2L8 839 aa20.23■□□□□ 0.83
TRA2A-202ENST00000392502 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
TRA2A-202ENST00000392502 TULP4Q9NRJ4 1543 aa20.23■□□□□ 0.83
TRA2A-202ENST00000392502 GTF2F1P35269 517 aaKnown RBP eCLIP20.22■□□□□ 0.837e-10■□□□□ 10.7
TRA2A-202ENST00000392502 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-202ENST00000392502 PLCD3Q8N3E9 789 aa20.22■□□□□ 0.83
TRA2A-202ENST00000392502 ARHGEF40Q8TER5 1519 aa20.22■□□□□ 0.83
TRA2A-202ENST00000392502 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
TRA2A-202ENST00000392502 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
TRA2A-202ENST00000392502 VGLL3A8MV65 326 aa20.21■□□□□ 0.83
TRA2A-202ENST00000392502 BCCIPQ9P287 314 aaKnown RBP eCLIP20.21■□□□□ 0.83
TRA2A-202ENST00000392502 STK26Q9P289 416 aa20.21■□□□□ 0.83
TRA2A-202ENST00000392502 PDLIM2Q96JY6 352 aa20.2■□□□□ 0.82
TRA2A-202ENST00000392502 TSPYL1Q9H0U9 437 aa20.2■□□□□ 0.82
TRA2A-202ENST00000392502 CABP2Q9NPB3 220 aa20.2■□□□□ 0.82
TRA2A-202ENST00000392502 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
TRA2A-202ENST00000392502 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
TRA2A-202ENST00000392502 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
TRA2A-202ENST00000392502 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
TRA2A-202ENST00000392502 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
TRA2A-202ENST00000392502 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
TRA2A-202ENST00000392502 SHPRHQ149N8 1683 aa20.18■□□□□ 0.82
TRA2A-202ENST00000392502 CCDC66A2RUB6 948 aa20.18■□□□□ 0.82
TRA2A-202ENST00000392502 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
TRA2A-202ENST00000392502 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
TRA2A-202ENST00000392502 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
TRA2A-202ENST00000392502 SECISBP2LQ93073 1101 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms