RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
TRAV27-201ENST00000390457 ALS2Q96Q42 1657 aa10.42□□□□□ -0.74
TRAV27-201ENST00000390457 HAP1P54257 671 aaPredicted RBP10.41□□□□□ -0.74
TRAV27-201ENST00000390457 LMOD2Q6P5Q4 547 aa10.4□□□□□ -0.74
TRAV27-201ENST00000390457 POGKQ9P215 609 aa10.4□□□□□ -0.74
TRAV27-201ENST00000390457 TULP4Q9NRJ4 1543 aa10.39□□□□□ -0.75
TRAV27-201ENST00000390457 CRYBG1Q9Y4K1 1723 aa10.39□□□□□ -0.75
TRAV27-201ENST00000390457 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
TRAV27-201ENST00000390457 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
TRAV27-201ENST00000390457 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
TRAV27-201ENST00000390457 BTG4Q9NY30 223 aa10.39□□□□□ -0.75
TRAV27-201ENST00000390457 TRAK1Q9UPV9 953 aa10.39□□□□□ -0.75
TRAV27-201ENST00000390457 CCDC9Q9Y3X0 531 aaKnown RBP10.39□□□□□ -0.75
TRAV27-201ENST00000390457 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
TRAV27-201ENST00000390457 SPATA31A5Q5VU36 1347 aa10.38□□□□□ -0.75
TRAV27-201ENST00000390457 SPATA31A7Q8IWB4 1347 aa10.38□□□□□ -0.75
TRAV27-201ENST00000390457 LRP5O75197 1615 aa10.38□□□□□ -0.75
TRAV27-201ENST00000390457 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
TRAV27-201ENST00000390457 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
TRAV27-201ENST00000390457 COL14A1Q05707 1796 aaKnown RBP10.38□□□□□ -0.75
TRAV27-201ENST00000390457 GPRASP1Q5JY77 1395 aa10.38□□□□□ -0.75
TRAV27-201ENST00000390457 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
TRAV27-201ENST00000390457 DISP2A7MBM2 1401 aa10.37□□□□□ -0.75
TRAV27-201ENST00000390457 STAC3Q96MF2 364 aa10.37□□□□□ -0.75
TRAV27-201ENST00000390457 THSD7AQ9UPZ6 1657 aa10.37□□□□□ -0.75
TRAV27-201ENST00000390457 EIF3AQ14152 1382 aaKnown RBP10.37□□□□□ -0.75
TRAV27-201ENST00000390457 HRCP23327 699 aa10.36□□□□□ -0.75
TRAV27-201ENST00000390457 BAG6P46379 1132 aa10.36□□□□□ -0.75
TRAV27-201ENST00000390457 ATP7BP35670 1465 aa10.36□□□□□ -0.75
TRAV27-201ENST00000390457 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
TRAV27-201ENST00000390457 DCAF11Q8TEB1 546 aa10.35□□□□□ -0.75
TRAV27-201ENST00000390457 SPATA31A1Q5TZJ5 1347 aa10.34□□□□□ -0.75
TRAV27-201ENST00000390457 PSDA5PKW4 1024 aaPredicted RBP10.34□□□□□ -0.75
TRAV27-201ENST00000390457 FAM182BQ5T319 152 aa10.34□□□□□ -0.75
TRAV27-201ENST00000390457 NGDNQ8NEJ9 315 aaKnown RBP10.34□□□□□ -0.75
TRAV27-201ENST00000390457 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
TRAV27-201ENST00000390457 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
TRAV27-201ENST00000390457 KDM2AQ9Y2K7 1162 aa10.34□□□□□ -0.75
TRAV27-201ENST00000390457 PRDM11Q9NQV5 511 aa10.33□□□□□ -0.76
TRAV27-201ENST00000390457 POLR3AO14802 1390 aaPredicted RBP10.33□□□□□ -0.76
TRAV27-201ENST00000390457 KIAA0232Q92628 1395 aa10.33□□□□□ -0.76
TRAV27-201ENST00000390457 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
TRAV27-201ENST00000390457 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
TRAV27-201ENST00000390457 TNS1Q9HBL0 1735 aaKnown RBP10.33□□□□□ -0.76
TRAV27-201ENST00000390457 A0A0G2JS52 829 aa10.32□□□□□ -0.76
TRAV27-201ENST00000390457 PLEKHG3A1L390 1219 aa10.32□□□□□ -0.76
TRAV27-201ENST00000390457 MYT1Q01538 1121 aa10.32□□□□□ -0.76
TRAV27-201ENST00000390457 CAMKK2Q96RR4 588 aa10.32□□□□□ -0.76
TRAV27-201ENST00000390457 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
TRAV27-201ENST00000390457 CHRNA2Q15822 529 aa10.31□□□□□ -0.76
TRAV27-201ENST00000390457 NBPF8Q3BBV2 869 aa10.31□□□□□ -0.76
TRAV27-201ENST00000390457 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
TRAV27-201ENST00000390457 CDK19Q9BWU1 502 aa10.31□□□□□ -0.76
TRAV27-201ENST00000390457 ITSN1Q15811 1721 aa10.3□□□□□ -0.76
TRAV27-201ENST00000390457 PHRF1Q9P1Y6 1649 aaKnown RBP10.3□□□□□ -0.76
TRAV27-201ENST00000390457 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
TRAV27-201ENST00000390457 EZH2Q15910 746 aaKnown RBP10.3□□□□□ -0.76
TRAV27-201ENST00000390457 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
TRAV27-201ENST00000390457 CCDC61Q9Y6R9 512 aa10.3□□□□□ -0.76
TRAV27-201ENST00000390457 TOPAZ1Q8N9V7 1692 aa10.3□□□□□ -0.76
TRAV27-201ENST00000390457 USP19O94966 1318 aa10.3□□□□□ -0.76
TRAV27-201ENST00000390457 ACEP12821 1306 aa10.3□□□□□ -0.76
TRAV27-201ENST00000390457 CPDO75976 1380 aa10.29□□□□□ -0.76
TRAV27-201ENST00000390457 CAMTA1Q9Y6Y1 1673 aa10.29□□□□□ -0.76
TRAV27-201ENST00000390457 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
TRAV27-201ENST00000390457 FAM196AQ6ZSG2 479 aa10.29□□□□□ -0.76
TRAV27-201ENST00000390457 SSH2Q76I76 1423 aa10.28□□□□□ -0.76
TRAV27-201ENST00000390457 ABCB7O75027 752 aa10.28□□□□□ -0.76
TRAV27-201ENST00000390457 TRIM37O94972 964 aa10.28□□□□□ -0.76
TRAV27-201ENST00000390457 NUTM2GQ5VZR2 741 aa10.28□□□□□ -0.76
TRAV27-201ENST00000390457 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
TRAV27-201ENST00000390457 PARD3Q8TEW0 1356 aa10.27□□□□□ -0.76
TRAV27-201ENST00000390457 NRKQ7Z2Y5 1582 aa10.27□□□□□ -0.76
TRAV27-201ENST00000390457 NBPF1Q3BBV0 1214 aa10.27□□□□□ -0.77
TRAV27-201ENST00000390457 STRN4Q9NRL3 753 aa10.27□□□□□ -0.77
TRAV27-201ENST00000390457 KIAA1210Q9ULL0 1709 aa10.27□□□□□ -0.77
TRAV27-201ENST00000390457 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
TRAV27-201ENST00000390457 UTRNP46939 3433 aa10.26□□□□□ -0.77
TRAV27-201ENST00000390457 RREB1Q92766 1687 aa10.25□□□□□ -0.77
TRAV27-201ENST00000390457 APBA3O96018 575 aa10.25□□□□□ -0.77
TRAV27-201ENST00000390457 GCP02774 474 aa10.25□□□□□ -0.77
TRAV27-201ENST00000390457 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
TRAV27-201ENST00000390457 TCP11L2Q8N4U5 519 aa10.25□□□□□ -0.77
TRAV27-201ENST00000390457 ABTB2Q8N961 1025 aa10.25□□□□□ -0.77
TRAV27-201ENST00000390457 USP35Q9P2H5 1018 aa10.24□□□□□ -0.77
TRAV27-201ENST00000390457 THRAP3Q9Y2W1 955 aaKnown RBP10.24□□□□□ -0.77
TRAV27-201ENST00000390457 BRD4O60885 1362 aaPredicted RBP10.24□□□□□ -0.77
TRAV27-201ENST00000390457 EVA1CP58658 441 aa10.23□□□□□ -0.77
TRAV27-201ENST00000390457 PDE3BQ13370 1112 aa10.23□□□□□ -0.77
TRAV27-201ENST00000390457 NLRP13Q86W25 1043 aa10.23□□□□□ -0.77
TRAV27-201ENST00000390457 NUP188Q5SRE5 1749 aa10.23□□□□□ -0.77
TRAV27-201ENST00000390457 COL5A2P05997 1499 aaPredicted RBP10.23□□□□□ -0.77
TRAV27-201ENST00000390457 PEAK1Q9H792 1746 aa10.22□□□□□ -0.77
TRAV27-201ENST00000390457 PARP4Q9UKK3 1724 aaKnown RBP10.22□□□□□ -0.77
TRAV27-201ENST00000390457 PPIP5K1Q6PFW1 1433 aa10.22□□□□□ -0.77
TRAV27-201ENST00000390457 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
TRAV27-201ENST00000390457 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.78
TRAV27-201ENST00000390457 AATKQ6ZMQ8 1374 aa10.21□□□□□ -0.78
TRAV27-201ENST00000390457 USP6P35125 1406 aa10.21□□□□□ -0.78
TRAV27-201ENST00000390457 SLIT3O75094 1523 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms