RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 GCC2Q8IWJ2 1684 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 DYNC1I1O14576 645 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 CHMP4BP1P59074 171 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
RFC1-202ENST00000381897 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
RFC1-202ENST00000381897 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 TCOF1Q13428 1488 aaKnown RBP6.94□□□□□ -1.3
RFC1-202ENST00000381897 UQCRHLA0A096LP55 91 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 UQCRHP07919 91 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 ZMYM3Q14202 1370 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 POLA1P09884 1462 aaPredicted RBP6.93□□□□□ -1.3
RFC1-202ENST00000381897 HS1BP3Q53T59 392 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 FAM193AP78312 1265 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 ZMYM4Q5VZL5 1548 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 RALGAPBQ86X10 1494 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 CCDC144AA2RUR9 1427 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 SH3BGRP55822 239 aaPredicted RBP6.93□□□□□ -1.3
RFC1-202ENST00000381897 RGL3Q3MIN7 710 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 EFCAB2Q5VUJ9 269 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 DNAJC2Q99543 621 aaKnown RBP6.93□□□□□ -1.3
RFC1-202ENST00000381897 DAPK1P53355 1430 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 NAP1L1P55209 391 aaKnown RBP6.93□□□□□ -1.3
RFC1-202ENST00000381897 RNF187Q5TA31 235 aaPredicted RBP6.93□□□□□ -1.3
RFC1-202ENST00000381897 ATP6V1E2Q96A05 226 aa6.93□□□□□ -1.3
RFC1-202ENST00000381897 GRIN2BQ13224 1484 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 SASS6Q6UVJ0 657 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 TBC1D32Q96NH3 1257 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 COG6Q9Y2V7 657 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 PTPRKQ15262 1439 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 KIF14Q15058 1648 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 UGGT2Q9NYU1 1516 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 NKTRP30414 1462 aaKnown RBP6.92□□□□□ -1.3
RFC1-202ENST00000381897 OFD1O75665 1012 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 DNAJA1P31689 397 aaKnown RBP6.92□□□□□ -1.3
RFC1-202ENST00000381897 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
RFC1-202ENST00000381897 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 KIF16BQ96L93 1317 aa6.92□□□□□ -1.3
RFC1-202ENST00000381897 MPHOSPH6Q99547 160 aaKnown RBP6.92□□□□□ -1.3
RFC1-202ENST00000381897 PARD3Q8TEW0 1356 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 ZBBXA8MT70 800 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 NRDCO43847 1150 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 SLC4A10Q6U841 1118 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 VTI1AQ96AJ9 217 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 MARCH6O60337 910 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 TPM3P06753 285 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 KDM4CQ9H3R0 1056 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 DIAPH3Q9NSV4 1193 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.91□□□□□ -1.3
RFC1-202ENST00000381897 SPATA31E1Q6ZUB1 1445 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 ST18O60284 1047 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 USP5P45974 858 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 XPCQ01831 940 aaPredicted RBP6.91□□□□□ -1.3
RFC1-202ENST00000381897 ADAMTS8Q9UP79 889 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 IQSEC3Q9UPP2 1182 aaPredicted RBP6.91□□□□□ -1.3
RFC1-202ENST00000381897 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
RFC1-202ENST00000381897 CCDC66A2RUB6 948 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 MCCP23508 829 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 SLFN5Q08AF3 891 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 TEX14Q8IWB6 1497 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 ZNF771Q7L3S4 317 aaPredicted RBP6.9□□□□□ -1.3
RFC1-202ENST00000381897 DDX19BQ9UMR2 479 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 FSD2A1L4K1 749 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 CNPY4Q8N129 248 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 MORC4Q8TE76 937 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 PDZRN3Q9UPQ7 1066 aa6.9□□□□□ -1.3
RFC1-202ENST00000381897 GRM1Q13255 1194 aa6.9□□□□□ -1.31
RFC1-202ENST00000381897 ITPRIPQ8IWB1 547 aa6.9□□□□□ -1.31
RFC1-202ENST00000381897 DMRT2Q9Y5R5 561 aa6.9□□□□□ -1.31
RFC1-202ENST00000381897 BLMP54132 1417 aaPredicted RBP6.9□□□□□ -1.31
RFC1-202ENST00000381897 MBD3O95983 291 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 ZC3H15Q8WU90 426 aaKnown RBP6.89□□□□□ -1.31
RFC1-202ENST00000381897 GTPBP4Q9BZE4 634 aaKnown RBP6.89□□□□□ -1.31
RFC1-202ENST00000381897 SCAPERQ9BY12 1400 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 POLR1AO95602 1720 aaPredicted RBP6.89□□□□□ -1.31
RFC1-202ENST00000381897 SSR1P43307 286 aaKnown RBP6.89□□□□□ -1.31
RFC1-202ENST00000381897 C20orf194Q5TEA3 1177 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 CCDC146Q8IYE0 955 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 DNAJC5Q9H3Z4 198 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 PTPRGP23470 1445 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 GAPVD1Q14C86 1478 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 ARHGEF12Q9NZN5 1544 aa6.89□□□□□ -1.31
RFC1-202ENST00000381897 SEMA3EO15041 775 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 PANK2Q9BZ23 570 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 APAF1O14727 1248 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 ABCB7O75027 752 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 LETM1O95202 739 aaPredicted RBP6.88□□□□□ -1.31
RFC1-202ENST00000381897 PPP2R1AP30153 589 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 JPH4Q96JJ6 628 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 DNAI2Q9GZS0 605 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 ZNF219Q9P2Y4 722 aaPredicted RBP6.88□□□□□ -1.31
RFC1-202ENST00000381897 KIF21AQ7Z4S6 1674 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 ANKRD50Q9ULJ7 1429 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 CTTNBP2Q8WZ74 1663 aa6.88□□□□□ -1.31
RFC1-202ENST00000381897 SF3B2Q13435 895 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms