RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PCGF6Q9BYE7 350 aa6.72□□□□□ -1.33
C9orf72-203ENST00000380003 USP32Q8NFA0 1604 aa6.72□□□□□ -1.33
C9orf72-203ENST00000380003 TNS3Q68CZ2 1445 aa6.71□□□□□ -1.33
C9orf72-203ENST00000380003 FMN2Q9NZ56 1722 aa6.71□□□□□ -1.33
C9orf72-203ENST00000380003 ZRANB1Q9UGI0 708 aa6.71□□□□□ -1.34
C9orf72-203ENST00000380003 GPRASP1Q5JY77 1395 aa6.71□□□□□ -1.34
C9orf72-203ENST00000380003 KIAA0232Q92628 1395 aa6.71□□□□□ -1.34
C9orf72-203ENST00000380003 PSDA5PKW4 1024 aaPredicted RBP6.71□□□□□ -1.34
C9orf72-203ENST00000380003 CCDC61Q9Y6R9 512 aa6.71□□□□□ -1.34
C9orf72-203ENST00000380003 RALGAPBQ86X10 1494 aa6.7□□□□□ -1.34
C9orf72-203ENST00000380003 FBLN1P23142 703 aa6.7□□□□□ -1.34
C9orf72-203ENST00000380003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.7□□□□□ -1.34
C9orf72-203ENST00000380003 SIRT1Q96EB6 747 aa6.7□□□□□ -1.34
C9orf72-203ENST00000380003 PRAG1Q86YV5 1406 aa6.7□□□□□ -1.34
C9orf72-203ENST00000380003 CENPJQ9HC77 1338 aaPredicted RBP6.7□□□□□ -1.34
C9orf72-203ENST00000380003 LARP1Q6PKG0 1096 aaKnown RBP6.69□□□□□ -1.34
C9orf72-203ENST00000380003 TMC1Q8TDI8 760 aa6.69□□□□□ -1.34
C9orf72-203ENST00000380003 ATRNO75882 1429 aa6.69□□□□□ -1.34
C9orf72-203ENST00000380003 ROCK2O75116 1388 aaKnown RBP6.69□□□□□ -1.34
C9orf72-203ENST00000380003 HRCP23327 699 aa6.69□□□□□ -1.34
C9orf72-203ENST00000380003 ATP7BP35670 1465 aa6.69□□□□□ -1.34
C9orf72-203ENST00000380003 EVA1CP58658 441 aa6.69□□□□□ -1.34
C9orf72-203ENST00000380003 NLRP6P59044 892 aa6.69□□□□□ -1.34
C9orf72-203ENST00000380003 EN1Q05925 392 aaPredicted RBP6.68□□□□□ -1.34
C9orf72-203ENST00000380003 KRT27Q7Z3Y8 459 aa6.68□□□□□ -1.34
C9orf72-203ENST00000380003 SLIT2O94813 1529 aa6.68□□□□□ -1.34
C9orf72-203ENST00000380003 KNDC1Q76NI1 1749 aa6.68□□□□□ -1.34
C9orf72-203ENST00000380003 GLI3P10071 1580 aa6.68□□□□□ -1.34
C9orf72-203ENST00000380003 PPIP5K1Q6PFW1 1433 aa6.68□□□□□ -1.34
C9orf72-203ENST00000380003 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
C9orf72-203ENST00000380003 TRIM37O94972 964 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 VPS72Q15906 364 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 PTF1AQ7RTS3 328 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 AXIN2Q9Y2T1 843 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 ARHGEF28Q8N1W1 1705 aaKnown RBP6.67□□□□□ -1.34
C9orf72-203ENST00000380003 GCP02774 474 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 SLC12A5Q9H2X9 1139 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 ATAD2Q6PL18 1390 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 TULP4Q9NRJ4 1543 aa6.67□□□□□ -1.34
C9orf72-203ENST00000380003 ARHGEF10O15013 1369 aa6.66□□□□□ -1.34
C9orf72-203ENST00000380003 LAMC1P11047 1609 aa6.66□□□□□ -1.34
C9orf72-203ENST00000380003 PPP4R3CPQ6ZMV5 832 aa6.66□□□□□ -1.34
C9orf72-203ENST00000380003 SBNO1A3KN83 1393 aa6.66□□□□□ -1.34
C9orf72-203ENST00000380003 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
C9orf72-203ENST00000380003 COL22A1Q8NFW1 1626 aaPredicted RBP6.66□□□□□ -1.34
C9orf72-203ENST00000380003 PCNTO95613 3336 aa6.66□□□□□ -1.34
C9orf72-203ENST00000380003 TRIM26Q12899 539 aaPredicted RBP6.65□□□□□ -1.34
C9orf72-203ENST00000380003 DLC1Q96QB1 1528 aa6.65□□□□□ -1.34
C9orf72-203ENST00000380003 POLR3GLQ9BT43 218 aa6.65□□□□□ -1.34
C9orf72-203ENST00000380003 BRWD3Q6RI45 1802 aa6.65□□□□□ -1.35
C9orf72-203ENST00000380003 ANKARQ7Z5J8 1434 aa6.65□□□□□ -1.35
C9orf72-203ENST00000380003 ST20-MTHFSA0A0A6YYL1 179 aa6.65□□□□□ -1.35
C9orf72-203ENST00000380003 NME9Q86XW9 330 aa6.65□□□□□ -1.35
C9orf72-203ENST00000380003 TONSLQ96HA7 1378 aa6.64□□□□□ -1.35
C9orf72-203ENST00000380003 SPATA31A5Q5VU36 1347 aa6.64□□□□□ -1.35
C9orf72-203ENST00000380003 SPATA31A7Q8IWB4 1347 aa6.64□□□□□ -1.35
C9orf72-203ENST00000380003 PLEKHG3A1L390 1219 aa6.64□□□□□ -1.35
C9orf72-203ENST00000380003 SF3B2Q13435 895 aaKnown RBP6.64□□□□□ -1.35
C9orf72-203ENST00000380003 EZH2Q15910 746 aaKnown RBP6.64□□□□□ -1.35
C9orf72-203ENST00000380003 KIF1AQ12756 1690 aa6.64□□□□□ -1.35
C9orf72-203ENST00000380003 LTV1Q96GA3 475 aaPredicted RBP6.64□□□□□ -1.35
C9orf72-203ENST00000380003 CDK12Q9NYV4 1490 aaPredicted RBP6.64□□□□□ -1.35
C9orf72-203ENST00000380003 SPATA31A1Q5TZJ5 1347 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 R3HDM1Q15032 1099 aaKnown RBP6.63□□□□□ -1.35
C9orf72-203ENST00000380003 TOM1L2Q6ZVM7 507 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 NLRP13Q86W25 1043 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 TRPM3Q9HCF6 1732 aaPredicted RBP6.63□□□□□ -1.35
C9orf72-203ENST00000380003 PLCH1Q4KWH8 1693 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 EVC2Q86UK5 1308 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 MARF1Q9Y4F3 1742 aaKnown RBP6.63□□□□□ -1.35
C9orf72-203ENST00000380003 CAMTA1Q9Y6Y1 1673 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 ONECUT3O60422 494 aaPredicted RBP6.63□□□□□ -1.35
C9orf72-203ENST00000380003 CSB-PGBD3P0DP91 1061 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 PDE3BQ13370 1112 aa6.63□□□□□ -1.35
C9orf72-203ENST00000380003 ADGRB2O60241 1585 aa6.62□□□□□ -1.35
C9orf72-203ENST00000380003 POLR3AO14802 1390 aaPredicted RBP6.62□□□□□ -1.35
C9orf72-203ENST00000380003 APBA3O96018 575 aa6.62□□□□□ -1.35
C9orf72-203ENST00000380003 STAC3Q96MF2 364 aa6.62□□□□□ -1.35
C9orf72-203ENST00000380003 ALS2Q96Q42 1657 aa6.62□□□□□ -1.35
C9orf72-203ENST00000380003 ABCA3Q99758 1704 aa6.62□□□□□ -1.35
C9orf72-203ENST00000380003 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
C9orf72-203ENST00000380003 PDGFDQ9GZP0 370 aaPredicted RBP6.62□□□□□ -1.35
C9orf72-203ENST00000380003 TTC21BQ7Z4L5 1316 aa6.61□□□□□ -1.35
C9orf72-203ENST00000380003 QRICH2Q9H0J4 1663 aa6.61□□□□□ -1.35
C9orf72-203ENST00000380003 USP6P35125 1406 aa6.61□□□□□ -1.35
C9orf72-203ENST00000380003 KTN1Q86UP2 1357 aaKnown RBP6.61□□□□□ -1.35
C9orf72-203ENST00000380003 EIF3AQ14152 1382 aaKnown RBP6.61□□□□□ -1.35
C9orf72-203ENST00000380003 BLMP54132 1417 aaPredicted RBP6.6□□□□□ -1.35
C9orf72-203ENST00000380003 KCNQ4P56696 695 aa6.6□□□□□ -1.35
C9orf72-203ENST00000380003 TCP11L2Q8N4U5 519 aa6.6□□□□□ -1.35
C9orf72-203ENST00000380003 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
C9orf72-203ENST00000380003 KAT6BQ8WYB5 2073 aa6.6□□□□□ -1.35
C9orf72-203ENST00000380003 KCNQ2O43526 872 aa6.6□□□□□ -1.35
C9orf72-203ENST00000380003 SSH2Q76I76 1423 aa6.6□□□□□ -1.35
C9orf72-203ENST00000380003 TRPM1Q7Z4N2 1603 aa6.59□□□□□ -1.35
C9orf72-203ENST00000380003 RRS1Q15050 365 aaKnown RBP6.59□□□□□ -1.35
C9orf72-203ENST00000380003 NLRP2Q9NX02 1062 aa6.59□□□□□ -1.35
C9orf72-203ENST00000380003 BAG6P46379 1132 aa6.59□□□□□ -1.35
C9orf72-203ENST00000380003 GGNBP2Q9H3C7 697 aa6.59□□□□□ -1.35
C9orf72-203ENST00000380003 TNNT2P45379 298 aaPredicted RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms