RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 NME8Q8N427 588 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 MSL3Q8N5Y2 521 aaKnown RBP4.39□□□□□ -1.71
PRKD3-202ENST00000379066 WDR70Q9NW82 654 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 TESPA1A2RU30 521 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-202ENST00000379066 TSPAN18Q96SJ8 248 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 MTERF4Q7Z6M4 381 aaKnown RBP4.39□□□□□ -1.71
PRKD3-202ENST00000379066 ANKRD13AQ8IZ07 590 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 CXorf38Q8TB03 319 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 KDM4CQ9H3R0 1056 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 RPS6KL1Q9Y6S9 549 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 CD109Q6YHK3 1445 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 GOLGA6L3A6NEY3 463 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 H0YHG0 523 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 SARNPP82979 210 aaKnown RBP4.39□□□□□ -1.71
PRKD3-202ENST00000379066 NBPF8Q3BBV2 869 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 NBPF14Q5TI25 921 aa4.39□□□□□ -1.71
PRKD3-202ENST00000379066 ARHGEF1Q92888 912 aaKnown RBP4.39□□□□□ -1.71
PRKD3-202ENST00000379066 TERF1P54274 439 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 DNAJC21Q5F1R6 531 aaKnown RBP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 ARL10Q8N8L6 244 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 AKNAQ7Z591 1439 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 U2AF1L5P0DN76 240 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 U2AF1Q01081 240 aaKnown RBP eCLIP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 NFKBIBQ15653 356 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 SPRYD3Q8NCJ5 442 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 RAB11FIP3O75154 756 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 HDGFL2Q7Z4V5 671 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 TTC30BQ8N4P2 665 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 GABBR1Q9UBS5 961 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 RPAINQ86UA6 219 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 KLHL42Q9P2K6 505 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 FHAD1B1AJZ9 1412 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 CCDC66A2RUB6 948 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 ZSCAN20P17040 1043 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 LONRF3Q496Y0 759 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 NOL10Q9BSC4 688 aaKnown RBP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 IRAK4Q9NWZ3 460 aa4.38□□□□□ -1.71
PRKD3-202ENST00000379066 R3HCC1Q9Y3T6 440 aaKnown RBP4.38□□□□□ -1.71
PRKD3-202ENST00000379066 SYNJ2O15056 1496 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 HMGXB3Q12766 1538 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 MTA1Q13330 715 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 TIGD1Q96MW7 591 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 RMI1Q9H9A7 625 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 WDHD1O75717 1129 aaPredicted RBP4.37□□□□□ -1.71
PRKD3-202ENST00000379066 SUGT1Q9Y2Z0 365 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 BICRAQ9NZM4 1560 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 NEXNQ0ZGT2 675 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 SKAP1Q86WV1 359 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 MICALL1Q8N3F8 863 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 SLC24A3Q9HC58 644 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 GOPCQ9HD26 462 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 PPP2R5AQ15172 486 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 GAS2L2Q8NHY3 880 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 AMPHP49418 695 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 TSPYL1Q9H0U9 437 aa4.37□□□□□ -1.71
PRKD3-202ENST00000379066 DNMBPQ6XZF7 1577 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 TOPBP1Q92547 1522 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 MS4A1P11836 297 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 NAT1P18440 290 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 RAPGEF2Q9Y4G8 1499 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 XPCQ01831 940 aaPredicted RBP4.36□□□□□ -1.71
PRKD3-202ENST00000379066 E2F5Q15329 346 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 INF2Q27J81 1249 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 WWC3Q9ULE0 1092 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 FANCAO15360 1455 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 UQCRHLA0A096LP55 91 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 CAND2O75155 1236 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 UQCRHP07919 91 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 TTC30AQ86WT1 665 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 ANAPC4Q9UJX5 808 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 UHRF1BP1Q6BDS2 1440 aa4.36□□□□□ -1.71
PRKD3-202ENST00000379066 GOLGA6L6A8MZA4 724 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 ESPNB1AK53 854 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 PAX7P23759 505 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 ANKRD23Q86SG2 305 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 BORCS6Q96GS4 357 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 SPOCK3Q9BQ16 436 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 CIZ1Q9ULV3 898 aaPredicted RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 IQSEC3Q9UPP2 1182 aaPredicted RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 SMC3Q9UQE7 1217 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 CCDC18Q5T9S5 1454 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 IPO7O95373 1038 aaKnown RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 FHOD3Q2V2M9 1422 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 HDGFL1Q5TGJ6 251 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 RBM33Q96EV2 1170 aaKnown RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 NUCKS1Q9H1E3 243 aaKnown RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 PPFIA4O75335 1185 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 CAPN2P17655 700 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 ABL2P42684 1182 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 CSPP1Q1MSJ5 1256 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 UPF2Q9HAU5 1272 aaKnown RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 SUFUQ9UMX1 484 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 MSH6P52701 1360 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 TONSLQ96HA7 1378 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 GPR162Q16538 588 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 ITFG2Q969R8 447 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 PUF60Q9UHX1 559 aaKnown RBP4.35□□□□□ -1.71
PRKD3-202ENST00000379066 CLEC11AQ9Y240 323 aa4.35□□□□□ -1.71
PRKD3-202ENST00000379066 LIG1P18858 919 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms