RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
MSH5-202ENST00000375740 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
MSH5-202ENST00000375740 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
MSH5-202ENST00000375740 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
MSH5-202ENST00000375740 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
MSH5-202ENST00000375740 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.49
MSH5-202ENST00000375740 ATP7BP35670 1465 aa18.08■□□□□ 0.49
MSH5-202ENST00000375740 UBE2Q2Q8WVN8 375 aa18.08■□□□□ 0.48
MSH5-202ENST00000375740 UBR1Q8IWV7 1749 aa18.08■□□□□ 0.48
MSH5-202ENST00000375740 KDM2BQ8NHM5 1336 aa18.08■□□□□ 0.48
MSH5-202ENST00000375740 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
MSH5-202ENST00000375740 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
MSH5-202ENST00000375740 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
MSH5-202ENST00000375740 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
MSH5-202ENST00000375740 MS4A1P11836 297 aa18.06■□□□□ 0.48
MSH5-202ENST00000375740 FBLN1P23142 703 aa18.06■□□□□ 0.48
MSH5-202ENST00000375740 PDE4AP27815 886 aa18.06■□□□□ 0.48
MSH5-202ENST00000375740 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
MSH5-202ENST00000375740 PPIP5K1Q6PFW1 1433 aa18.05■□□□□ 0.48
MSH5-202ENST00000375740 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
MSH5-202ENST00000375740 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
MSH5-202ENST00000375740 PNPLA6Q8IY17 1366 aa18.05■□□□□ 0.48
MSH5-202ENST00000375740 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
MSH5-202ENST00000375740 RARSP54136 660 aaKnown RBP18.05■□□□□ 0.48
MSH5-202ENST00000375740 TMPOP42166 694 aaKnown RBP18.04■□□□□ 0.48
MSH5-202ENST00000375740 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
MSH5-202ENST00000375740 NCKAP5LQ9HCH0 1330 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 TECPR2O15040 1411 aa18.04■□□□□ 0.48
MSH5-202ENST00000375740 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
MSH5-202ENST00000375740 PPM1GO15355 546 aaPredicted RBP18.03■□□□□ 0.48
MSH5-202ENST00000375740 LTKP29376 864 aa18.03■□□□□ 0.48
MSH5-202ENST00000375740 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.48
MSH5-202ENST00000375740 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.48
MSH5-202ENST00000375740 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.48
MSH5-202ENST00000375740 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.47
MSH5-202ENST00000375740 EIF5BO60841 1220 aaKnown RBP18.01■□□□□ 0.47
MSH5-202ENST00000375740 NME9Q86XW9 330 aa18.01■□□□□ 0.47
MSH5-202ENST00000375740 PANK1Q8TE04 598 aa18.01■□□□□ 0.47
MSH5-202ENST00000375740 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
MSH5-202ENST00000375740 EDC4Q6P2E9 1401 aaKnown RBP18.01■□□□□ 0.47
MSH5-202ENST00000375740 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
MSH5-202ENST00000375740 CPS1P31327 1500 aa18.01■□□□□ 0.47
MSH5-202ENST00000375740 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
MSH5-202ENST00000375740 COG6Q9Y2V7 657 aa18■□□□□ 0.47
MSH5-202ENST00000375740 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
MSH5-202ENST00000375740 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
MSH5-202ENST00000375740 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
MSH5-202ENST00000375740 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
MSH5-202ENST00000375740 RIPK4P57078 832 aa17.98■□□□□ 0.47
MSH5-202ENST00000375740 TSR2Q969E8 191 aaKnown RBP17.98■□□□□ 0.47
MSH5-202ENST00000375740 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
MSH5-202ENST00000375740 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
MSH5-202ENST00000375740 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
MSH5-202ENST00000375740 FCHSD2O94868 740 aa17.97■□□□□ 0.47
MSH5-202ENST00000375740 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
MSH5-202ENST00000375740 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
MSH5-202ENST00000375740 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
MSH5-202ENST00000375740 GSE1Q14687 1217 aa17.96■□□□□ 0.47
MSH5-202ENST00000375740 SLC26A8Q96RN1 970 aa17.96■□□□□ 0.47
MSH5-202ENST00000375740 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
MSH5-202ENST00000375740 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
MSH5-202ENST00000375740 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
MSH5-202ENST00000375740 IGHDP01880 384 aa17.95■□□□□ 0.46
MSH5-202ENST00000375740 EXOSC9Q06265 439 aaKnown RBP17.95■□□□□ 0.46
MSH5-202ENST00000375740 COG3Q96JB2 828 aa17.95■□□□□ 0.46
MSH5-202ENST00000375740 RSPH6AQ9H0K4 717 aa17.95■□□□□ 0.46
MSH5-202ENST00000375740 MON2Q7Z3U7 1717 aa17.94■□□□□ 0.46
MSH5-202ENST00000375740 C3P01024 1663 aa17.94■□□□□ 0.46
MSH5-202ENST00000375740 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
MSH5-202ENST00000375740 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
MSH5-202ENST00000375740 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.94■□□□□ 0.46
MSH5-202ENST00000375740 RLBP1P12271 317 aa17.94■□□□□ 0.46
MSH5-202ENST00000375740 IL16Q14005 1332 aa17.93■□□□□ 0.46
MSH5-202ENST00000375740 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
MSH5-202ENST00000375740 HMOX1P09601 288 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
MSH5-202ENST00000375740 IL13P35225 146 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 NFKBIBQ15653 356 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 PTPRUQ92729 1446 aa17.92■□□□□ 0.46
MSH5-202ENST00000375740 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
MSH5-202ENST00000375740 PHACTR3Q96KR7 559 aa17.91■□□□□ 0.46
MSH5-202ENST00000375740 RGS3P49796 1198 aa17.89■□□□□ 0.45
MSH5-202ENST00000375740 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
MSH5-202ENST00000375740 ZKSCAN2Q63HK3 967 aa17.89■□□□□ 0.45
MSH5-202ENST00000375740 ACEP12821 1306 aa17.89■□□□□ 0.45
MSH5-202ENST00000375740 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
MSH5-202ENST00000375740 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
MSH5-202ENST00000375740 SLIT1O75093 1534 aa17.88■□□□□ 0.45
MSH5-202ENST00000375740 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
MSH5-202ENST00000375740 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
MSH5-202ENST00000375740 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms