RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
CXCL12-203ENST00000374429 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-203ENST00000374429 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
CXCL12-203ENST00000374429 VSIG10Q8N0Z9 540 aa13.72□□□□□ -0.21
CXCL12-203ENST00000374429 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
CXCL12-203ENST00000374429 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
CXCL12-203ENST00000374429 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
CXCL12-203ENST00000374429 PPRC1Q5VV67 1664 aaKnown RBP13.71□□□□□ -0.21
CXCL12-203ENST00000374429 A0A0G2JS52 829 aa13.71□□□□□ -0.21
CXCL12-203ENST00000374429 NKTRP30414 1462 aaKnown RBP13.71□□□□□ -0.22
CXCL12-203ENST00000374429 ACEP12821 1306 aa13.71□□□□□ -0.22
CXCL12-203ENST00000374429 PIK3C2GO75747 1445 aa13.71□□□□□ -0.22
CXCL12-203ENST00000374429 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
CXCL12-203ENST00000374429 ANKRD36BQ8N2N9 1353 aa13.7□□□□□ -0.22
CXCL12-203ENST00000374429 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
CXCL12-203ENST00000374429 SPHKAPQ2M3C7 1700 aa13.7□□□□□ -0.22
CXCL12-203ENST00000374429 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-203ENST00000374429 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
CXCL12-203ENST00000374429 UPF2Q9HAU5 1272 aaKnown RBP13.69□□□□□ -0.22
CXCL12-203ENST00000374429 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
CXCL12-203ENST00000374429 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
CXCL12-203ENST00000374429 RIMS2Q9UQ26 1411 aa13.69□□□□□ -0.22
CXCL12-203ENST00000374429 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-203ENST00000374429 ESCO1Q5FWF5 840 aa13.69□□□□□ -0.22
CXCL12-203ENST00000374429 RTF1Q92541 710 aaKnown RBP13.69□□□□□ -0.22
CXCL12-203ENST00000374429 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
CXCL12-203ENST00000374429 ABCC3O15438 1527 aa13.68□□□□□ -0.22
CXCL12-203ENST00000374429 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
CXCL12-203ENST00000374429 ABCA6Q8N139 1617 aa13.68□□□□□ -0.22
CXCL12-203ENST00000374429 F6X3S4 739 aa13.67□□□□□ -0.22
CXCL12-203ENST00000374429 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
CXCL12-203ENST00000374429 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-203ENST00000374429 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
CXCL12-203ENST00000374429 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-203ENST00000374429 TET3O43151 1660 aa13.66□□□□□ -0.22
CXCL12-203ENST00000374429 ATF7IPQ6VMQ6 1270 aa13.66□□□□□ -0.22
CXCL12-203ENST00000374429 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
CXCL12-203ENST00000374429 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
CXCL12-203ENST00000374429 KCNA6P17658 529 aa13.65□□□□□ -0.22
CXCL12-203ENST00000374429 MVPQ14764 893 aaKnown RBP13.65□□□□□ -0.22
CXCL12-203ENST00000374429 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
CXCL12-203ENST00000374429 MBIPQ9NS73 344 aa13.65□□□□□ -0.22
CXCL12-203ENST00000374429 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-203ENST00000374429 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
CXCL12-203ENST00000374429 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
CXCL12-203ENST00000374429 MAP3K4Q9Y6R4 1608 aa13.65□□□□□ -0.23
CXCL12-203ENST00000374429 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
CXCL12-203ENST00000374429 PSME1Q06323 249 aa13.64□□□□□ -0.23
CXCL12-203ENST00000374429 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
CXCL12-203ENST00000374429 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
CXCL12-203ENST00000374429 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-203ENST00000374429 KIF1BO60333 1816 aa13.64□□□□□ -0.23
CXCL12-203ENST00000374429 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
CXCL12-203ENST00000374429 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
CXCL12-203ENST00000374429 ANXA1P04083 346 aa13.63□□□□□ -0.23
CXCL12-203ENST00000374429 IPO8O15397 1037 aaKnown RBP13.63□□□□□ -0.23
CXCL12-203ENST00000374429 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
CXCL12-203ENST00000374429 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
CXCL12-203ENST00000374429 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
CXCL12-203ENST00000374429 NFE2L2Q16236 605 aa13.63□□□□□ -0.23
CXCL12-203ENST00000374429 FRMPD1Q5SYB0 1578 aa13.62□□□□□ -0.23
CXCL12-203ENST00000374429 FCHSD2O94868 740 aa13.62□□□□□ -0.23
CXCL12-203ENST00000374429 TSPYL4Q9UJ04 414 aa13.62□□□□□ -0.23
CXCL12-203ENST00000374429 SMARCA5O60264 1052 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-203ENST00000374429 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
CXCL12-203ENST00000374429 ZC3H6P61129 1189 aaKnown RBP13.62□□□□□ -0.23
CXCL12-203ENST00000374429 TSHZ3Q63HK5 1081 aa13.62□□□□□ -0.23
CXCL12-203ENST00000374429 NOL8Q76FK4 1167 aaKnown RBP13.62□□□□□ -0.23
CXCL12-203ENST00000374429 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
CXCL12-203ENST00000374429 TNRQ92752 1358 aa13.62□□□□□ -0.23
CXCL12-203ENST00000374429 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-203ENST00000374429 MS4A1P11836 297 aa13.61□□□□□ -0.23
CXCL12-203ENST00000374429 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
CXCL12-203ENST00000374429 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
CXCL12-203ENST00000374429 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
CXCL12-203ENST00000374429 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
CXCL12-203ENST00000374429 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
CXCL12-203ENST00000374429 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
CXCL12-203ENST00000374429 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
CXCL12-203ENST00000374429 C16orf71Q8IYS4 520 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-203ENST00000374429 DDX19BQ9UMR2 479 aa13.59□□□□□ -0.23
CXCL12-203ENST00000374429 CCDC9Q9Y3X0 531 aaKnown RBP13.59□□□□□ -0.23
CXCL12-203ENST00000374429 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
CXCL12-203ENST00000374429 NEO1Q92859 1461 aa13.59□□□□□ -0.23
CXCL12-203ENST00000374429 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
CXCL12-203ENST00000374429 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
CXCL12-203ENST00000374429 POLR1AO95602 1720 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-203ENST00000374429 GNAI1P63096 354 aa13.58□□□□□ -0.24
CXCL12-203ENST00000374429 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-203ENST00000374429 MYOM2P54296 1465 aa13.58□□□□□ -0.24
CXCL12-203ENST00000374429 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-203ENST00000374429 FOXD4L5Q5VV16 416 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-203ENST00000374429 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-203ENST00000374429 FOXD4L4Q8WXT5 416 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-203ENST00000374429 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
CXCL12-203ENST00000374429 IL13P35225 146 aa13.57□□□□□ -0.24
CXCL12-203ENST00000374429 SYNMO15061 1565 aa13.57□□□□□ -0.24
CXCL12-203ENST00000374429 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
CXCL12-203ENST00000374429 HSPA2P54652 639 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 ABCC11Q96J66 1382 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms