RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PREX2Q70Z35 1606 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 ARHGEF5Q12774 1597 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 UHRF1BP1LA0JNW5 1464 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
HERC4-202ENST00000373700 EVA1CP58658 441 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 AIMP1Q12904 312 aaKnown RBP9.73□□□□□ -0.85
HERC4-202ENST00000373700 DMRT2Q9Y5R5 561 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 ABCC1P33527 1531 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 ADGBQ8N7X0 1667 aa9.73□□□□□ -0.85
HERC4-202ENST00000373700 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 TNNQ9UQP3 1299 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 GNAI1P63096 354 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 GSE1Q14687 1217 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 TWISTNBQ3B726 338 aaPredicted RBP9.72□□□□□ -0.85
HERC4-202ENST00000373700 FOXD4L6Q3SYB3 417 aaPredicted RBP9.72□□□□□ -0.85
HERC4-202ENST00000373700 FOXD4L3Q6VB84 417 aaPredicted RBP9.72□□□□□ -0.85
HERC4-202ENST00000373700 AEBP1Q8IUX7 1158 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 STRN4Q9NRL3 753 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 KCNA6P17658 529 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 LTKP29376 864 aa9.72□□□□□ -0.85
HERC4-202ENST00000373700 IGHDP01880 384 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
HERC4-202ENST00000373700 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 RILPL2Q969X0 211 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 PLEKHH1Q9ULM0 1364 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 SSH1Q8WYL5 1049 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 C22orf23Q9BZE7 217 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 A0A1W2PP64 1363 aa9.7□□□□□ -0.86
HERC4-202ENST00000373700 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
HERC4-202ENST00000373700 COL17A1Q9UMD9 1497 aaPredicted RBP9.69□□□□□ -0.86
HERC4-202ENST00000373700 NAP1L2Q9ULW6 460 aaPredicted RBP9.69□□□□□ -0.86
HERC4-202ENST00000373700 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
HERC4-202ENST00000373700 NPHP1O15259 732 aa9.69□□□□□ -0.86
HERC4-202ENST00000373700 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
HERC4-202ENST00000373700 NAP1L5Q96NT1 182 aaPredicted RBP9.69□□□□□ -0.86
HERC4-202ENST00000373700 POLKQ9UBT6 870 aa9.69□□□□□ -0.86
HERC4-202ENST00000373700 KIF16BQ96L93 1317 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 FCHSD2O94868 740 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 ATF7IPQ6VMQ6 1270 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 WDR63Q8IWG1 891 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 PTMAP06454 111 aaKnown RBP9.68□□□□□ -0.86
HERC4-202ENST00000373700 TMEM57Q8N5G2 664 aa9.68□□□□□ -0.86
HERC4-202ENST00000373700 HMMRO75330 724 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
HERC4-202ENST00000373700 NFE2L2Q16236 605 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 YTHDC2Q9H6S0 1430 aaKnown RBP9.67□□□□□ -0.86
HERC4-202ENST00000373700 FGD1P98174 961 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 CHRNA2Q15822 529 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 KRT24Q2M2I5 525 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 CABLES1Q8TDN4 633 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 ZNF530Q6P9A1 599 aaPredicted RBP9.67□□□□□ -0.86
HERC4-202ENST00000373700 ASXL1Q8IXJ9 1541 aa9.67□□□□□ -0.86
HERC4-202ENST00000373700 PPIP5K1Q6PFW1 1433 aa9.66□□□□□ -0.86
HERC4-202ENST00000373700 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
HERC4-202ENST00000373700 PPP6R1Q9UPN7 881 aa9.66□□□□□ -0.86
HERC4-202ENST00000373700 PRDM15P57071 1507 aaPredicted RBP9.66□□□□□ -0.86
HERC4-202ENST00000373700 ANKRD36BQ8N2N9 1353 aa9.66□□□□□ -0.86
HERC4-202ENST00000373700 GBP4Q96PP9 640 aa9.66□□□□□ -0.86
HERC4-202ENST00000373700 API5Q9BZZ5 524 aaKnown RBP9.66□□□□□ -0.86
HERC4-202ENST00000373700 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
HERC4-202ENST00000373700 DDX17Q92841 729 aaKnown RBP9.66□□□□□ -0.86
HERC4-202ENST00000373700 MAGI2Q86UL8 1455 aa9.66□□□□□ -0.86
HERC4-202ENST00000373700 ZFYVE16Q7Z3T8 1539 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 BRPF3Q9ULD4 1205 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 TTC21BQ7Z4L5 1316 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 GOLGA6L3A6NEY3 463 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 KAT6BQ8WYB5 2073 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
HERC4-202ENST00000373700 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
HERC4-202ENST00000373700 F6X3S4 739 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
HERC4-202ENST00000373700 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
HERC4-202ENST00000373700 CLASP1Q7Z460 1538 aa9.65□□□□□ -0.87
HERC4-202ENST00000373700 MCCP23508 829 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 MPRIPQ6WCQ1 1025 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 TTC5Q8N0Z6 440 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 C9orf78Q9NZ63 289 aaPredicted RBP9.64□□□□□ -0.87
HERC4-202ENST00000373700 PCDHB15Q9Y5E8 787 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 NEO1Q92859 1461 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 L1TD1Q5T7N2 865 aaKnown RBP9.64□□□□□ -0.87
HERC4-202ENST00000373700 ANXA1P04083 346 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 RLBP1P12271 317 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 PRDM11Q9NQV5 511 aa9.64□□□□□ -0.87
HERC4-202ENST00000373700 NKTRP30414 1462 aaKnown RBP9.64□□□□□ -0.87
HERC4-202ENST00000373700 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 ORAI2Q96SN7 254 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 METP08581 1390 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 TRIM27P14373 513 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 GAS2L2Q8NHY3 880 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 LRRC59Q96AG4 307 aaKnown RBP9.63□□□□□ -0.87
HERC4-202ENST00000373700 TOM1L2Q6ZVM7 507 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 MYL6BP14649 208 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 TSPYL6Q8N831 410 aa9.63□□□□□ -0.87
HERC4-202ENST00000373700 LRPPRCP42704 1394 aaKnown RBP9.62□□□□□ -0.87
HERC4-202ENST00000373700 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms