RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
HDAC8-207ENST00000373573 SLKQ9H2G2 1235 aaPredicted RBP16.74■□□□□ 0.27
HDAC8-207ENST00000373573 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
HDAC8-207ENST00000373573 RIMS1Q86UR5 1692 aaKnown RBP16.73■□□□□ 0.27
HDAC8-207ENST00000373573 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
HDAC8-207ENST00000373573 POGKQ9P215 609 aa16.73■□□□□ 0.27
HDAC8-207ENST00000373573 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-207ENST00000373573 IDI1Q13907 227 aa16.72■□□□□ 0.27
HDAC8-207ENST00000373573 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
HDAC8-207ENST00000373573 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
HDAC8-207ENST00000373573 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
HDAC8-207ENST00000373573 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
HDAC8-207ENST00000373573 NEXMIFQ5QGS0 1516 aa16.71■□□□□ 0.27
HDAC8-207ENST00000373573 TULP4Q9NRJ4 1543 aa16.71■□□□□ 0.27
HDAC8-207ENST00000373573 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-207ENST00000373573 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
HDAC8-207ENST00000373573 ARHGEF28Q8N1W1 1705 aaKnown RBP16.7■□□□□ 0.26
HDAC8-207ENST00000373573 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
HDAC8-207ENST00000373573 TNRQ92752 1358 aa16.69■□□□□ 0.26
HDAC8-207ENST00000373573 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
HDAC8-207ENST00000373573 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
HDAC8-207ENST00000373573 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC8-207ENST00000373573 FTSJ3Q8IY81 847 aaKnown RBP16.67■□□□□ 0.26
HDAC8-207ENST00000373573 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-207ENST00000373573 L1TD1Q5T7N2 865 aaKnown RBP16.67■□□□□ 0.26
HDAC8-207ENST00000373573 UBR1Q8IWV7 1749 aa16.66■□□□□ 0.26
HDAC8-207ENST00000373573 A2ML1A8K2U0 1454 aa16.65■□□□□ 0.26
HDAC8-207ENST00000373573 HDAC1Q13547 482 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-207ENST00000373573 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-207ENST00000373573 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
HDAC8-207ENST00000373573 ZFYVE9O95405 1425 aa16.64■□□□□ 0.25
HDAC8-207ENST00000373573 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
HDAC8-207ENST00000373573 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
HDAC8-207ENST00000373573 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
HDAC8-207ENST00000373573 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
HDAC8-207ENST00000373573 ABCC11Q96J66 1382 aa16.63■□□□□ 0.25
HDAC8-207ENST00000373573 TRIM27P14373 513 aa16.63■□□□□ 0.25
HDAC8-207ENST00000373573 EXOSC9Q06265 439 aaKnown RBP16.63■□□□□ 0.25
HDAC8-207ENST00000373573 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
HDAC8-207ENST00000373573 IL16Q14005 1332 aa16.62■□□□□ 0.25
HDAC8-207ENST00000373573 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
HDAC8-207ENST00000373573 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
HDAC8-207ENST00000373573 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
HDAC8-207ENST00000373573 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
HDAC8-207ENST00000373573 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 MCM4P33991 863 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 ANKRD26Q9UPS8 1709 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
HDAC8-207ENST00000373573 MFAP1P55081 439 aaKnown RBP16.59■□□□□ 0.25
HDAC8-207ENST00000373573 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
HDAC8-207ENST00000373573 MED14O60244 1454 aa16.58■□□□□ 0.25
HDAC8-207ENST00000373573 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
HDAC8-207ENST00000373573 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
HDAC8-207ENST00000373573 RIMS2Q9UQ26 1411 aa16.57■□□□□ 0.24
HDAC8-207ENST00000373573 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
HDAC8-207ENST00000373573 NOB1Q9ULX3 412 aaKnown RBP16.57■□□□□ 0.24
HDAC8-207ENST00000373573 SPRYD3Q8NCJ5 442 aa16.57■□□□□ 0.24
HDAC8-207ENST00000373573 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
HDAC8-207ENST00000373573 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-207ENST00000373573 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-207ENST00000373573 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
HDAC8-207ENST00000373573 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
HDAC8-207ENST00000373573 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
HDAC8-207ENST00000373573 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
HDAC8-207ENST00000373573 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-207ENST00000373573 GGNBP2Q9H3C7 697 aa16.55■□□□□ 0.24
HDAC8-207ENST00000373573 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
HDAC8-207ENST00000373573 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
HDAC8-207ENST00000373573 PTPRMP28827 1452 aa16.54■□□□□ 0.24
HDAC8-207ENST00000373573 SETD1BQ9UPS6 1966 aaKnown RBP16.54■□□□□ 0.24
HDAC8-207ENST00000373573 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
HDAC8-207ENST00000373573 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
HDAC8-207ENST00000373573 NUCB1Q02818 461 aa16.53■□□□□ 0.24
HDAC8-207ENST00000373573 ARXQ96QS3 562 aa16.53■□□□□ 0.24
HDAC8-207ENST00000373573 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
HDAC8-207ENST00000373573 RBM25P49756 843 aaKnown RBP16.53■□□□□ 0.24
HDAC8-207ENST00000373573 RIPK4P57078 832 aa16.53■□□□□ 0.24
HDAC8-207ENST00000373573 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
HDAC8-207ENST00000373573 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-207ENST00000373573 RRAGDQ9NQL2 400 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-207ENST00000373573 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
HDAC8-207ENST00000373573 CD163L1Q9NR16 1453 aa16.52■□□□□ 0.24
HDAC8-207ENST00000373573 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.24
HDAC8-207ENST00000373573 FYB1O15117 783 aa16.52■□□□□ 0.24
HDAC8-207ENST00000373573 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
HDAC8-207ENST00000373573 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
HDAC8-207ENST00000373573 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.24
HDAC8-207ENST00000373573 CDC42BPGQ6DT37 1551 aa16.52■□□□□ 0.24
HDAC8-207ENST00000373573 PNPLA6Q8IY17 1366 aa16.52■□□□□ 0.23
HDAC8-207ENST00000373573 TRAK2O60296 914 aa16.52■□□□□ 0.23
HDAC8-207ENST00000373573 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.23
HDAC8-207ENST00000373573 TERF2IPQ9NYB0 399 aa16.52■□□□□ 0.23
HDAC8-207ENST00000373573 SLIT1O75093 1534 aa16.51■□□□□ 0.23
HDAC8-207ENST00000373573 DDIT3P35638 169 aa16.51■□□□□ 0.23
HDAC8-207ENST00000373573 SNX21Q969T3 373 aa16.51■□□□□ 0.23
HDAC8-207ENST00000373573 ALKQ9UM73 1620 aa16.51■□□□□ 0.23
HDAC8-207ENST00000373573 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms