RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SBNO2Q9Y2G9 1366 aa22.04■■□□□ 1.12
CHTOP-203ENST00000368690 RUNDC1Q96C34 613 aa22.04■■□□□ 1.12
CHTOP-203ENST00000368690 DDX11L8A8MPP1 907 aa22.04■■□□□ 1.12
CHTOP-203ENST00000368690 TRAK2O60296 914 aa22.04■■□□□ 1.12
CHTOP-203ENST00000368690 CARD14Q9BXL6 1004 aa22.02■■□□□ 1.12
CHTOP-203ENST00000368690 RRP9O43818 475 aaKnown RBP22.02■■□□□ 1.12
CHTOP-203ENST00000368690 A2ML1A8K2U0 1454 aa22.02■■□□□ 1.12
CHTOP-203ENST00000368690 C3P01024 1663 aa22.02■■□□□ 1.12
CHTOP-203ENST00000368690 RLBP1P12271 317 aa22.01■■□□□ 1.11
CHTOP-203ENST00000368690 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
CHTOP-203ENST00000368690 NCOA3Q9Y6Q9 1424 aa22.01■■□□□ 1.11
CHTOP-203ENST00000368690 C22orf23Q9BZE7 217 aa22.01■■□□□ 1.11
CHTOP-203ENST00000368690 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
CHTOP-203ENST00000368690 NAP1L5Q96NT1 182 aaPredicted RBP21.99■■□□□ 1.11
CHTOP-203ENST00000368690 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
CHTOP-203ENST00000368690 CT47B1P0C2W7 299 aaPredicted RBP21.98■■□□□ 1.11
CHTOP-203ENST00000368690 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
CHTOP-203ENST00000368690 USP32Q8NFA0 1604 aa21.98■■□□□ 1.11
CHTOP-203ENST00000368690 TRAK1Q9UPV9 953 aa21.98■■□□□ 1.11
CHTOP-203ENST00000368690 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
CHTOP-203ENST00000368690 HSP90AA1P07900 732 aaKnown RBP21.97■■□□□ 1.11
CHTOP-203ENST00000368690 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
CHTOP-203ENST00000368690 GRPEL1Q9HAV7 217 aa21.97■■□□□ 1.11
CHTOP-203ENST00000368690 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
CHTOP-203ENST00000368690 ZFYVE9O95405 1425 aa21.96■■□□□ 1.11
CHTOP-203ENST00000368690 DDIT3P35638 169 aa21.95■■□□□ 1.1
CHTOP-203ENST00000368690 HDAC1Q13547 482 aaPredicted RBP21.95■■□□□ 1.1
CHTOP-203ENST00000368690 TCP11L2Q8N4U5 519 aa21.95■■□□□ 1.1
CHTOP-203ENST00000368690 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
CHTOP-203ENST00000368690 SETBP1Q9Y6X0 1596 aa21.94■■□□□ 1.1
CHTOP-203ENST00000368690 PTMSP20962 102 aa21.94■■□□□ 1.1
CHTOP-203ENST00000368690 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
CHTOP-203ENST00000368690 CIZ1Q9ULV3 898 aaPredicted RBP21.94■■□□□ 1.1
CHTOP-203ENST00000368690 SNX21Q969T3 373 aa21.94■■□□□ 1.1
CHTOP-203ENST00000368690 GZF1Q9H116 711 aaPredicted RBP21.93■■□□□ 1.1
CHTOP-203ENST00000368690 HSP90AA2PQ14568 343 aaPredicted RBP21.92■■□□□ 1.1
CHTOP-203ENST00000368690 ZKSCAN2Q63HK3 967 aa21.92■■□□□ 1.1
CHTOP-203ENST00000368690 ESPNB1AK53 854 aa21.92■■□□□ 1.1
CHTOP-203ENST00000368690 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
CHTOP-203ENST00000368690 STK26Q9P289 416 aa21.91■■□□□ 1.1
CHTOP-203ENST00000368690 UBR1Q8IWV7 1749 aa21.91■■□□□ 1.1
CHTOP-203ENST00000368690 RBM25P49756 843 aaKnown RBP21.91■■□□□ 1.1
CHTOP-203ENST00000368690 TNNQ9UQP3 1299 aa21.91■■□□□ 1.1
CHTOP-203ENST00000368690 ADGRB2O60241 1585 aa21.91■■□□□ 1.1
CHTOP-203ENST00000368690 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
CHTOP-203ENST00000368690 DZIP1LQ8IYY4 767 aaKnown RBP21.9■■□□□ 1.1
CHTOP-203ENST00000368690 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHTOP-203ENST00000368690 SKOR2Q2VWA4 1001 aaPredicted RBP21.89■■□□□ 1.1
CHTOP-203ENST00000368690 MFAP1P55081 439 aaKnown RBP21.89■■□□□ 1.09
CHTOP-203ENST00000368690 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
CHTOP-203ENST00000368690 SMC5Q8IY18 1101 aa21.89■■□□□ 1.09
CHTOP-203ENST00000368690 NSD3Q9BZ95 1437 aa21.88■■□□□ 1.09
CHTOP-203ENST00000368690 SPRYD3Q8NCJ5 442 aa21.88■■□□□ 1.09
CHTOP-203ENST00000368690 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
CHTOP-203ENST00000368690 PKNOX2Q96KN3 472 aa21.87■■□□□ 1.09
CHTOP-203ENST00000368690 ARXQ96QS3 562 aa21.87■■□□□ 1.09
CHTOP-203ENST00000368690 FTSJ3Q8IY81 847 aaKnown RBP21.86■■□□□ 1.09
CHTOP-203ENST00000368690 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
CHTOP-203ENST00000368690 ADAMTSL3P82987 1691 aa21.86■■□□□ 1.09
CHTOP-203ENST00000368690 NEUROD2Q15784 382 aa21.85■■□□□ 1.09
CHTOP-203ENST00000368690 GBP4Q96PP9 640 aa21.85■■□□□ 1.09
CHTOP-203ENST00000368690 DDX19BQ9UMR2 479 aa21.85■■□□□ 1.09
CHTOP-203ENST00000368690 RRP7AQ9Y3A4 280 aaKnown RBP21.85■■□□□ 1.09
CHTOP-203ENST00000368690 ALKQ9UM73 1620 aa21.85■■□□□ 1.09
CHTOP-203ENST00000368690 SAFB2Q14151 953 aaKnown RBP eCLIP21.85■■□□□ 1.09
CHTOP-203ENST00000368690 TPM2P07951 284 aa21.84■■□□□ 1.09
CHTOP-203ENST00000368690 BCL2L13Q9BXK5 485 aa21.84■■□□□ 1.09
CHTOP-203ENST00000368690 TRIM44Q96DX7 344 aaPredicted RBP21.83■■□□□ 1.09
CHTOP-203ENST00000368690 RAB3GAP1Q15042 981 aa21.82■■□□□ 1.08
CHTOP-203ENST00000368690 TXNDC2Q86VQ3 553 aa21.82■■□□□ 1.08
CHTOP-203ENST00000368690 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
CHTOP-203ENST00000368690 NSD2O96028 1365 aa21.81■■□□□ 1.08
CHTOP-203ENST00000368690 ERBB4Q15303 1308 aa21.81■■□□□ 1.08
CHTOP-203ENST00000368690 TNPO1Q92973 898 aaKnown RBP21.81■■□□□ 1.08
CHTOP-203ENST00000368690 QRICH2Q9H0J4 1663 aa21.8■■□□□ 1.08
CHTOP-203ENST00000368690 LTKP29376 864 aa21.8■■□□□ 1.08
CHTOP-203ENST00000368690 THEMISQ8N1K5 641 aaPredicted RBP21.8■■□□□ 1.08
CHTOP-203ENST00000368690 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
CHTOP-203ENST00000368690 ARHGEF28Q8N1W1 1705 aaKnown RBP21.79■■□□□ 1.08
CHTOP-203ENST00000368690 IBTKQ9P2D0 1353 aaPredicted RBP21.79■■□□□ 1.08
CHTOP-203ENST00000368690 MTHFSP49914 203 aa21.78■■□□□ 1.08
CHTOP-203ENST00000368690 PUS7Q96PZ0 661 aaKnown RBP21.78■■□□□ 1.08
CHTOP-203ENST00000368690 TRIM27P14373 513 aa21.77■■□□□ 1.08
CHTOP-203ENST00000368690 CLEC17AQ6ZS10 378 aa21.77■■□□□ 1.08
CHTOP-203ENST00000368690 PTPRMP28827 1452 aa21.77■■□□□ 1.08
CHTOP-203ENST00000368690 CCDC173Q0VFZ6 552 aa21.77■■□□□ 1.07
CHTOP-203ENST00000368690 ATF7IPQ6VMQ6 1270 aa21.77■■□□□ 1.07
CHTOP-203ENST00000368690 PRAM1Q96QH2 718 aa21.77■■□□□ 1.07
CHTOP-203ENST00000368690 CEP170BQ9Y4F5 1589 aaPredicted RBP21.76■■□□□ 1.07
CHTOP-203ENST00000368690 IL16Q14005 1332 aa21.76■■□□□ 1.07
CHTOP-203ENST00000368690 KIF16BQ96L93 1317 aa21.76■■□□□ 1.07
CHTOP-203ENST00000368690 NUCB1Q02818 461 aa21.76■■□□□ 1.07
CHTOP-203ENST00000368690 VSIG10Q8N0Z9 540 aa21.76■■□□□ 1.07
CHTOP-203ENST00000368690 PPP1R9BQ96SB3 815 aa21.76■■□□□ 1.07
CHTOP-203ENST00000368690 NRXN3Q9Y4C0 1643 aa21.76■■□□□ 1.07
CHTOP-203ENST00000368690 SMC4Q9NTJ3 1288 aa21.75■■□□□ 1.07
CHTOP-203ENST00000368690 ABCC11Q96J66 1382 aa21.75■■□□□ 1.07
CHTOP-203ENST00000368690 GAS2L3Q86XJ1 694 aa21.75■■□□□ 1.07
CHTOP-203ENST00000368690 ZMYND15Q9H091 742 aa21.75■■□□□ 1.07
CHTOP-203ENST00000368690 ZBTB40Q9NUA8 1239 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms