RNA–Protein interactions for RNA: ENST00000368358.3

HCN3-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN3, Length 3,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-201ENST00000368358 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
HCN3-201ENST00000368358 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
HCN3-201ENST00000368358 ATF3P18847 181 aa17.32■□□□□ 0.36
HCN3-201ENST00000368358 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
HCN3-201ENST00000368358 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
HCN3-201ENST00000368358 HAP1P54257 671 aaPredicted RBP17.31■□□□□ 0.36
HCN3-201ENST00000368358 RIPK4P57078 832 aa17.31■□□□□ 0.36
HCN3-201ENST00000368358 KIAA1210Q9ULL0 1709 aa17.31■□□□□ 0.36
HCN3-201ENST00000368358 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
HCN3-201ENST00000368358 POLKQ9UBT6 870 aa17.3■□□□□ 0.36
HCN3-201ENST00000368358 FER1L4A9Z1Z3 1794 aa17.3■□□□□ 0.36
HCN3-201ENST00000368358 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
HCN3-201ENST00000368358 PHF8Q9UPP1 1060 aa17.3■□□□□ 0.36
HCN3-201ENST00000368358 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
HCN3-201ENST00000368358 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
HCN3-201ENST00000368358 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
HCN3-201ENST00000368358 BCAR3O75815 825 aa17.29■□□□□ 0.36
HCN3-201ENST00000368358 NEURL4Q96JN8 1562 aa17.29■□□□□ 0.36
HCN3-201ENST00000368358 ORAI2Q96SN7 254 aa17.29■□□□□ 0.36
HCN3-201ENST00000368358 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
HCN3-201ENST00000368358 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
HCN3-201ENST00000368358 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
HCN3-201ENST00000368358 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
HCN3-201ENST00000368358 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
HCN3-201ENST00000368358 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.36
HCN3-201ENST00000368358 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
HCN3-201ENST00000368358 DDX17Q92841 729 aaKnown RBP17.27■□□□□ 0.36
HCN3-201ENST00000368358 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.35
HCN3-201ENST00000368358 RGS3P49796 1198 aa17.26■□□□□ 0.35
HCN3-201ENST00000368358 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
HCN3-201ENST00000368358 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
HCN3-201ENST00000368358 PTPRUQ92729 1446 aa17.26■□□□□ 0.35
HCN3-201ENST00000368358 NPC1L1Q9UHC9 1359 aa17.25■□□□□ 0.35
HCN3-201ENST00000368358 E9PSI1 815 aa17.24■□□□□ 0.35
HCN3-201ENST00000368358 SLFN5Q08AF3 891 aa17.24■□□□□ 0.35
HCN3-201ENST00000368358 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
HCN3-201ENST00000368358 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
HCN3-201ENST00000368358 C3P01024 1663 aa17.23■□□□□ 0.35
HCN3-201ENST00000368358 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
HCN3-201ENST00000368358 NSD2O96028 1365 aa17.22■□□□□ 0.35
HCN3-201ENST00000368358 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
HCN3-201ENST00000368358 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
HCN3-201ENST00000368358 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
HCN3-201ENST00000368358 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
HCN3-201ENST00000368358 COG6Q9Y2V7 657 aa17.21■□□□□ 0.35
HCN3-201ENST00000368358 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.35
HCN3-201ENST00000368358 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
HCN3-201ENST00000368358 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
HCN3-201ENST00000368358 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
HCN3-201ENST00000368358 NPHP4O75161 1426 aaPredicted RBP17.19■□□□□ 0.34
HCN3-201ENST00000368358 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
HCN3-201ENST00000368358 MYH16Q9H6N6 1097 aa17.19■□□□□ 0.34
HCN3-201ENST00000368358 CSB-PGBD3P0DP91 1061 aa17.19■□□□□ 0.34
HCN3-201ENST00000368358 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
HCN3-201ENST00000368358 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
HCN3-201ENST00000368358 EDC4Q6P2E9 1401 aaKnown RBP17.18■□□□□ 0.34
HCN3-201ENST00000368358 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
HCN3-201ENST00000368358 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
HCN3-201ENST00000368358 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
HCN3-201ENST00000368358 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
HCN3-201ENST00000368358 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
HCN3-201ENST00000368358 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
HCN3-201ENST00000368358 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
HCN3-201ENST00000368358 SMC4Q9NTJ3 1288 aa17.17■□□□□ 0.34
HCN3-201ENST00000368358 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
HCN3-201ENST00000368358 MYOM1P52179 1685 aa17.16■□□□□ 0.34
HCN3-201ENST00000368358 EXOSC9Q06265 439 aaKnown RBP17.16■□□□□ 0.34
HCN3-201ENST00000368358 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
HCN3-201ENST00000368358 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
HCN3-201ENST00000368358 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
HCN3-201ENST00000368358 A0A0G2JS52 829 aa17.14■□□□□ 0.33
HCN3-201ENST00000368358 FCHSD2O94868 740 aa17.14■□□□□ 0.33
HCN3-201ENST00000368358 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
HCN3-201ENST00000368358 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
HCN3-201ENST00000368358 MCM10Q7L590 875 aa17.13■□□□□ 0.33
HCN3-201ENST00000368358 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
HCN3-201ENST00000368358 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
HCN3-201ENST00000368358 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
HCN3-201ENST00000368358 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
HCN3-201ENST00000368358 MYO3AQ8NEV4 1616 aa17.11■□□□□ 0.33
HCN3-201ENST00000368358 CD163L1Q9NR16 1453 aa17.1■□□□□ 0.33
HCN3-201ENST00000368358 ATP7BP35670 1465 aa17.1■□□□□ 0.33
HCN3-201ENST00000368358 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
HCN3-201ENST00000368358 NBR1Q14596 966 aa17.1■□□□□ 0.33
HCN3-201ENST00000368358 CHRNA2Q15822 529 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 NLRP2Q9NX02 1062 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
HCN3-201ENST00000368358 IL13P35225 146 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 USP6P35125 1406 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
HCN3-201ENST00000368358 CPS1P31327 1500 aa17.08■□□□□ 0.33
HCN3-201ENST00000368358 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.32
HCN3-201ENST00000368358 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
HCN3-201ENST00000368358 RSPH6AQ9H0K4 717 aa17.08■□□□□ 0.32
HCN3-201ENST00000368358 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
HCN3-201ENST00000368358 TECPR2O15040 1411 aa17.07■□□□□ 0.32
HCN3-201ENST00000368358 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms