RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 PRAM1Q96QH2 718 aa26.22■■□□□ 1.79
TRIM3-202ENST00000359518 GLI2P10070 1586 aa26.21■■□□□ 1.79
TRIM3-202ENST00000359518 NSD2O96028 1365 aa26.19■■□□□ 1.78
TRIM3-202ENST00000359518 HDAC1Q13547 482 aaPredicted RBP26.19■■□□□ 1.78
TRIM3-202ENST00000359518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
TRIM3-202ENST00000359518 DIAPH1O60610 1272 aaKnown RBP26.19■■□□□ 1.78
TRIM3-202ENST00000359518 MCM4P33991 863 aa26.18■■□□□ 1.78
TRIM3-202ENST00000359518 THUMPD2Q9BTF0 503 aaKnown RBP26.18■■□□□ 1.78
TRIM3-202ENST00000359518 ELL2O00472 640 aaPredicted RBP26.18■■□□□ 1.78
TRIM3-202ENST00000359518 CT47B1P0C2W7 299 aaPredicted RBP26.17■■□□□ 1.78
TRIM3-202ENST00000359518 C1orf115Q9H7X2 142 aa26.17■■□□□ 1.78
TRIM3-202ENST00000359518 ZBTB40Q9NUA8 1239 aa26.17■■□□□ 1.78
TRIM3-202ENST00000359518 FRMPD1Q5SYB0 1578 aa26.17■■□□□ 1.78
TRIM3-202ENST00000359518 TERF2IPQ9NYB0 399 aa26.17■■□□□ 1.78
TRIM3-202ENST00000359518 ABCC11Q96J66 1382 aa26.16■■□□□ 1.78
TRIM3-202ENST00000359518 SMC5Q8IY18 1101 aa26.15■■□□□ 1.78
TRIM3-202ENST00000359518 CABP1Q9NZU7 370 aa26.15■■□□□ 1.78
TRIM3-202ENST00000359518 POGZQ7Z3K3 1410 aa26.15■■□□□ 1.78
TRIM3-202ENST00000359518 HMOX1P09601 288 aa26.14■■□□□ 1.78
TRIM3-202ENST00000359518 FAM43AQ8N2R8 423 aa26.14■■□□□ 1.78
TRIM3-202ENST00000359518 ABCC3O15438 1527 aa26.14■■□□□ 1.77
TRIM3-202ENST00000359518 PUS7Q96PZ0 661 aaKnown RBP26.14■■□□□ 1.77
TRIM3-202ENST00000359518 HSCBQ8IWL3 235 aa26.13■■□□□ 1.77
TRIM3-202ENST00000359518 USP32Q8NFA0 1604 aa26.13■■□□□ 1.77
TRIM3-202ENST00000359518 PRKAR2BP31323 418 aa26.13■■□□□ 1.77
TRIM3-202ENST00000359518 CHMP5Q9NZZ3 219 aa26.13■■□□□ 1.77
TRIM3-202ENST00000359518 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
TRIM3-202ENST00000359518 PANK2Q9BZ23 570 aa26.12■■□□□ 1.77
TRIM3-202ENST00000359518 IPO8O15397 1037 aaKnown RBP26.12■■□□□ 1.77
TRIM3-202ENST00000359518 L1TD1Q5T7N2 865 aaKnown RBP26.12■■□□□ 1.77
TRIM3-202ENST00000359518 ARHGEF28Q8N1W1 1705 aaKnown RBP26.11■■□□□ 1.77
TRIM3-202ENST00000359518 CAMSAP1Q5T5Y3 1602 aa26.11■■□□□ 1.77
TRIM3-202ENST00000359518 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
TRIM3-202ENST00000359518 XRCC6P12956 609 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRIM3-202ENST00000359518 FOXD4L1Q9NU39 408 aa26.1■■□□□ 1.77
TRIM3-202ENST00000359518 GOLGA6L3A6NEY3 463 aa26.1■■□□□ 1.77
TRIM3-202ENST00000359518 ANKRD45Q5TZF3 282 aa26.1■■□□□ 1.77
TRIM3-202ENST00000359518 CDK19Q9BWU1 502 aa26.1■■□□□ 1.77
TRIM3-202ENST00000359518 RRAGDQ9NQL2 400 aaPredicted RBP26.1■■□□□ 1.77
TRIM3-202ENST00000359518 TRAK2O60296 914 aa26.09■■□□□ 1.77
TRIM3-202ENST00000359518 NCBP3Q53F19 620 aaKnown RBP26.09■■□□□ 1.77
TRIM3-202ENST00000359518 HDGFL2Q7Z4V5 671 aaPredicted RBP26.09■■□□□ 1.77
TRIM3-202ENST00000359518 KIF16BQ96L93 1317 aa26.09■■□□□ 1.77
TRIM3-202ENST00000359518 SIGLEC1Q9BZZ2 1709 aa26.08■■□□□ 1.77
TRIM3-202ENST00000359518 PHACTR3Q96KR7 559 aa26.08■■□□□ 1.77
TRIM3-202ENST00000359518 NUCB1Q02818 461 aa26.08■■□□□ 1.77
TRIM3-202ENST00000359518 NEXMIFQ5QGS0 1516 aa26.07■■□□□ 1.76
TRIM3-202ENST00000359518 CHD1LQ86WJ1 897 aa26.07■■□□□ 1.76
TRIM3-202ENST00000359518 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
TRIM3-202ENST00000359518 TSPYL6Q8N831 410 aa26.07■■□□□ 1.76
TRIM3-202ENST00000359518 MLH3Q9UHC1 1453 aa26.06■■□□□ 1.76
TRIM3-202ENST00000359518 COL3A1P02461 1466 aaPredicted RBP26.06■■□□□ 1.76
TRIM3-202ENST00000359518 HECW2Q9P2P5 1572 aa26.05■■□□□ 1.76
TRIM3-202ENST00000359518 IL16Q14005 1332 aa26.05■■□□□ 1.76
TRIM3-202ENST00000359518 STAG3Q9UJ98 1225 aa26.04■■□□□ 1.76
TRIM3-202ENST00000359518 WAPLQ7Z5K2 1190 aa26.04■■□□□ 1.76
TRIM3-202ENST00000359518 ATAD2Q6PL18 1390 aa26.03■■□□□ 1.76
TRIM3-202ENST00000359518 FCHSD2O94868 740 aa26.01■■□□□ 1.75
TRIM3-202ENST00000359518 HSP90AB1P08238 724 aaKnown RBP26.01■■□□□ 1.75
TRIM3-202ENST00000359518 POLKQ9UBT6 870 aa26.01■■□□□ 1.75
TRIM3-202ENST00000359518 RSPH6AQ9H0K4 717 aa26.01■■□□□ 1.75
TRIM3-202ENST00000359518 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
TRIM3-202ENST00000359518 EMILIN1Q9Y6C2 1016 aa26■■□□□ 1.75
TRIM3-202ENST00000359518 CD163L1Q9NR16 1453 aa26■■□□□ 1.75
TRIM3-202ENST00000359518 HSP90AA1P07900 732 aaKnown RBP26■■□□□ 1.75
TRIM3-202ENST00000359518 RBM42Q9BTD8 480 aaKnown RBP26■■□□□ 1.75
TRIM3-202ENST00000359518 ZNF692Q9BU19 519 aaPredicted RBP26■■□□□ 1.75
TRIM3-202ENST00000359518 PNNQ9H307 717 aaKnown RBP26■■□□□ 1.75
TRIM3-202ENST00000359518 ZBTB7BO15156 539 aaPredicted RBP25.99■■□□□ 1.75
TRIM3-202ENST00000359518 ALDH1L2Q3SY69 923 aa25.99■■□□□ 1.75
TRIM3-202ENST00000359518 ZRANB1Q9UGI0 708 aa25.98■■□□□ 1.75
TRIM3-202ENST00000359518 VAMP4O75379 141 aa25.98■■□□□ 1.75
TRIM3-202ENST00000359518 CD2BP2O95400 341 aaKnown RBP25.98■■□□□ 1.75
TRIM3-202ENST00000359518 YTHDC2Q9H6S0 1430 aaKnown RBP25.98■■□□□ 1.75
TRIM3-202ENST00000359518 FSD2A1L4K1 749 aa25.97■■□□□ 1.75
TRIM3-202ENST00000359518 RBM25P49756 843 aaKnown RBP25.96■■□□□ 1.75
TRIM3-202ENST00000359518 PTPRMP28827 1452 aa25.96■■□□□ 1.75
TRIM3-202ENST00000359518 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
TRIM3-202ENST00000359518 TNPO1Q92973 898 aaKnown RBP25.96■■□□□ 1.75
TRIM3-202ENST00000359518 PPIP5K1Q6PFW1 1433 aa25.95■■□□□ 1.74
TRIM3-202ENST00000359518 MRPL50Q8N5N7 158 aaKnown RBP25.95■■□□□ 1.74
TRIM3-202ENST00000359518 FAM83GA6ND36 823 aa25.94■■□□□ 1.74
TRIM3-202ENST00000359518 DCTN1Q14203 1278 aa25.94■■□□□ 1.74
TRIM3-202ENST00000359518 NFE2L2Q16236 605 aa25.94■■□□□ 1.74
TRIM3-202ENST00000359518 SIRT2Q8IXJ6 389 aa25.94■■□□□ 1.74
TRIM3-202ENST00000359518 PIK3C2BO00750 1634 aa25.94■■□□□ 1.74
TRIM3-202ENST00000359518 PNPLA6Q8IY17 1366 aa25.94■■□□□ 1.74
TRIM3-202ENST00000359518 BMP2KLQ5H9B9 411 aa25.93■■□□□ 1.74
TRIM3-202ENST00000359518 TBC1D9Q6ZT07 1266 aa25.93■■□□□ 1.74
TRIM3-202ENST00000359518 MBIPQ9NS73 344 aa25.93■■□□□ 1.74
TRIM3-202ENST00000359518 LRRC7Q96NW7 1537 aa25.92■■□□□ 1.74
TRIM3-202ENST00000359518 MYO5BQ9ULV0 1848 aa25.92■■□□□ 1.74
TRIM3-202ENST00000359518 NME9Q86XW9 330 aa25.92■■□□□ 1.74
TRIM3-202ENST00000359518 YEATS2Q9ULM3 1422 aa25.92■■□□□ 1.74
TRIM3-202ENST00000359518 KIF2CQ99661 725 aa25.92■■□□□ 1.74
TRIM3-202ENST00000359518 C8orf58Q8NAV2 365 aa25.91■■□□□ 1.74
TRIM3-202ENST00000359518 DDX11L8A8MPP1 907 aa25.9■■□□□ 1.74
TRIM3-202ENST00000359518 RRS1Q15050 365 aaKnown RBP25.9■■□□□ 1.74
TRIM3-202ENST00000359518 NCKAP5LQ9HCH0 1330 aa25.9■■□□□ 1.74
TRIM3-202ENST00000359518 TWISTNBQ3B726 338 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms