RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
RPE-202ENST00000359429 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
RPE-202ENST00000359429 HSCBQ8IWL3 235 aa13.72□□□□□ -0.21
RPE-202ENST00000359429 ZBTB40Q9NUA8 1239 aa13.72□□□□□ -0.21
RPE-202ENST00000359429 QRICH2Q9H0J4 1663 aa13.72□□□□□ -0.21
RPE-202ENST00000359429 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
RPE-202ENST00000359429 CLCN1P35523 988 aa13.71□□□□□ -0.21
RPE-202ENST00000359429 LNPKQ9C0E8 428 aa13.71□□□□□ -0.22
RPE-202ENST00000359429 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.22
RPE-202ENST00000359429 ADGRL1O94910 1474 aa13.7□□□□□ -0.22
RPE-202ENST00000359429 ZC3H13Q5T200 1668 aaKnown RBP13.7□□□□□ -0.22
RPE-202ENST00000359429 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
RPE-202ENST00000359429 MRE11P49959 708 aa13.7□□□□□ -0.22
RPE-202ENST00000359429 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
RPE-202ENST00000359429 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
RPE-202ENST00000359429 USP32Q8NFA0 1604 aa13.7□□□□□ -0.22
RPE-202ENST00000359429 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
RPE-202ENST00000359429 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
RPE-202ENST00000359429 NUCB1Q02818 461 aa13.69□□□□□ -0.22
RPE-202ENST00000359429 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
RPE-202ENST00000359429 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
RPE-202ENST00000359429 GAS2L3Q86XJ1 694 aa13.69□□□□□ -0.22
RPE-202ENST00000359429 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
RPE-202ENST00000359429 NAP1L5Q96NT1 182 aaPredicted RBP13.68□□□□□ -0.22
RPE-202ENST00000359429 KIF2CQ99661 725 aa13.68□□□□□ -0.22
RPE-202ENST00000359429 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
RPE-202ENST00000359429 NPATQ14207 1427 aa13.68□□□□□ -0.22
RPE-202ENST00000359429 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
RPE-202ENST00000359429 EVC2Q86UK5 1308 aa13.68□□□□□ -0.22
RPE-202ENST00000359429 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
RPE-202ENST00000359429 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
RPE-202ENST00000359429 RIPK4P57078 832 aa13.67□□□□□ -0.22
RPE-202ENST00000359429 SNX21Q969T3 373 aa13.67□□□□□ -0.22
RPE-202ENST00000359429 NSD2O96028 1365 aa13.67□□□□□ -0.22
RPE-202ENST00000359429 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
RPE-202ENST00000359429 GGT6Q6P531 493 aa13.66□□□□□ -0.22
RPE-202ENST00000359429 CHD1LQ86WJ1 897 aa13.66□□□□□ -0.22
RPE-202ENST00000359429 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
RPE-202ENST00000359429 LMTK2Q8IWU2 1503 aa13.66□□□□□ -0.22
RPE-202ENST00000359429 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
RPE-202ENST00000359429 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
RPE-202ENST00000359429 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
RPE-202ENST00000359429 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
RPE-202ENST00000359429 PPLO60437 1756 aa13.64□□□□□ -0.23
RPE-202ENST00000359429 FYB1O15117 783 aa13.64□□□□□ -0.23
RPE-202ENST00000359429 HSP90AB1P08238 724 aaKnown RBP13.64□□□□□ -0.23
RPE-202ENST00000359429 IL16Q14005 1332 aa13.64□□□□□ -0.23
RPE-202ENST00000359429 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
RPE-202ENST00000359429 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
RPE-202ENST00000359429 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
RPE-202ENST00000359429 ESPNB1AK53 854 aa13.63□□□□□ -0.23
RPE-202ENST00000359429 GLI2P10070 1586 aa13.63□□□□□ -0.23
RPE-202ENST00000359429 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
RPE-202ENST00000359429 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
RPE-202ENST00000359429 BMP2KLQ5H9B9 411 aa13.62□□□□□ -0.23
RPE-202ENST00000359429 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
RPE-202ENST00000359429 STK26Q9P289 416 aa13.62□□□□□ -0.23
RPE-202ENST00000359429 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
RPE-202ENST00000359429 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
RPE-202ENST00000359429 SRPK2P78362 688 aaKnown RBP13.62□□□□□ -0.23
RPE-202ENST00000359429 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
RPE-202ENST00000359429 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
RPE-202ENST00000359429 FBLN1P23142 703 aa13.61□□□□□ -0.23
RPE-202ENST00000359429 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
RPE-202ENST00000359429 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
RPE-202ENST00000359429 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
RPE-202ENST00000359429 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
RPE-202ENST00000359429 ALDH1L2Q3SY69 923 aa13.6□□□□□ -0.23
RPE-202ENST00000359429 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
RPE-202ENST00000359429 SSFA2P28290 1259 aa13.59□□□□□ -0.23
RPE-202ENST00000359429 GAS2L2Q8NHY3 880 aa13.59□□□□□ -0.23
RPE-202ENST00000359429 GBP4Q96PP9 640 aa13.59□□□□□ -0.23
RPE-202ENST00000359429 ISY1Q9ULR0 285 aaKnown RBP13.59□□□□□ -0.23
RPE-202ENST00000359429 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
RPE-202ENST00000359429 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
RPE-202ENST00000359429 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
RPE-202ENST00000359429 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
RPE-202ENST00000359429 HSP90AA1P07900 732 aaKnown RBP13.58□□□□□ -0.24
RPE-202ENST00000359429 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 FRMPD1Q5SYB0 1578 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 CD163L1Q9NR16 1453 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
RPE-202ENST00000359429 MED14O60244 1454 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 ELL2O00472 640 aaPredicted RBP13.57□□□□□ -0.24
RPE-202ENST00000359429 VAMP4O75379 141 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
RPE-202ENST00000359429 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
RPE-202ENST00000359429 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
RPE-202ENST00000359429 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
RPE-202ENST00000359429 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
RPE-202ENST00000359429 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
RPE-202ENST00000359429 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
RPE-202ENST00000359429 SKOR2Q2VWA4 1001 aaPredicted RBP13.55□□□□□ -0.24
RPE-202ENST00000359429 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
RPE-202ENST00000359429 ASXL2Q76L83 1435 aa13.55□□□□□ -0.24
RPE-202ENST00000359429 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
RPE-202ENST00000359429 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
RPE-202ENST00000359429 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms