RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 POLR1AO95602 1720 aaPredicted RBP10.19□□□□□ -0.78
C11orf54-202ENST00000354421 DEKP35659 375 aaKnown RBP10.19□□□□□ -0.78
C11orf54-202ENST00000354421 NWD1Q149M9 1564 aa10.18□□□□□ -0.78
C11orf54-202ENST00000354421 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
C11orf54-202ENST00000354421 ZMYM3Q14202 1370 aa10.18□□□□□ -0.78
C11orf54-202ENST00000354421 SMG6Q86US8 1419 aaKnown RBP10.18□□□□□ -0.78
C11orf54-202ENST00000354421 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
C11orf54-202ENST00000354421 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
C11orf54-202ENST00000354421 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
C11orf54-202ENST00000354421 ANKLE2Q86XL3 938 aa10.17□□□□□ -0.78
C11orf54-202ENST00000354421 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
C11orf54-202ENST00000354421 NOP58Q9Y2X3 529 aaKnown RBP10.17□□□□□ -0.78
C11orf54-202ENST00000354421 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
C11orf54-202ENST00000354421 B4GALNT3Q6L9W6 998 aa10.16□□□□□ -0.78
C11orf54-202ENST00000354421 SPATA31E1Q6ZUB1 1445 aa10.16□□□□□ -0.78
C11orf54-202ENST00000354421 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
C11orf54-202ENST00000354421 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
C11orf54-202ENST00000354421 MRS2Q9HD23 443 aa10.16□□□□□ -0.78
C11orf54-202ENST00000354421 MIA2Q96PC5 1412 aa10.15□□□□□ -0.78
C11orf54-202ENST00000354421 PHLPP1O60346 1717 aa10.15□□□□□ -0.79
C11orf54-202ENST00000354421 NPHP4O75161 1426 aaPredicted RBP10.14□□□□□ -0.79
C11orf54-202ENST00000354421 DEFB132Q7Z7B7 95 aa10.14□□□□□ -0.79
C11orf54-202ENST00000354421 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
C11orf54-202ENST00000354421 MPHOSPH9Q99550 1183 aa10.14□□□□□ -0.79
C11orf54-202ENST00000354421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.14□□□□□ -0.79
C11orf54-202ENST00000354421 A2ML1A8K2U0 1454 aa10.14□□□□□ -0.79
C11orf54-202ENST00000354421 RPRD2Q5VT52 1461 aaKnown RBP10.14□□□□□ -0.79
C11orf54-202ENST00000354421 PTPREP23469 700 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 FAM9BQ8IZU0 186 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 MED14O60244 1454 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 BLMP54132 1417 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-202ENST00000354421 ATP10BO94823 1461 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 PTPN5P54829 565 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
C11orf54-202ENST00000354421 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
C11orf54-202ENST00000354421 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
C11orf54-202ENST00000354421 SCAPERQ9BY12 1400 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 KDM5CP41229 1560 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 ANKRD30BQ9BXX2 1392 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 EP400Q96L91 3159 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 REREQ9P2R6 1566 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 ROCK1Q13464 1354 aa10.12□□□□□ -0.79
C11orf54-202ENST00000354421 KIF7Q2M1P5 1343 aa10.11□□□□□ -0.79
C11orf54-202ENST00000354421 FOSBP53539 338 aa10.11□□□□□ -0.79
C11orf54-202ENST00000354421 ARID3CA6NKF2 412 aa10.1□□□□□ -0.79
C11orf54-202ENST00000354421 NBPF8Q3BBV2 869 aa10.1□□□□□ -0.79
C11orf54-202ENST00000354421 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
C11orf54-202ENST00000354421 THSD4Q6ZMP0 1018 aa10.1□□□□□ -0.79
C11orf54-202ENST00000354421 NUDCQ9Y266 331 aa10.1□□□□□ -0.79
C11orf54-202ENST00000354421 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
C11orf54-202ENST00000354421 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
C11orf54-202ENST00000354421 DHX29Q7Z478 1369 aaKnown RBP10.1□□□□□ -0.79
C11orf54-202ENST00000354421 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
C11orf54-202ENST00000354421 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
C11orf54-202ENST00000354421 COL16A1Q07092 1604 aaPredicted RBP10.08□□□□□ -0.8
C11orf54-202ENST00000354421 KDM5DQ9BY66 1539 aa10.08□□□□□ -0.8
C11orf54-202ENST00000354421 PDE4AP27815 886 aa10.07□□□□□ -0.8
C11orf54-202ENST00000354421 ANP32AP39687 249 aaKnown RBP10.07□□□□□ -0.8
C11orf54-202ENST00000354421 LAPTM4AQ15012 233 aa10.07□□□□□ -0.8
C11orf54-202ENST00000354421 ZBED2Q9BTP6 218 aa10.07□□□□□ -0.8
C11orf54-202ENST00000354421 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
C11orf54-202ENST00000354421 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-202ENST00000354421 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
C11orf54-202ENST00000354421 SF3B2Q13435 895 aaKnown RBP10.07□□□□□ -0.8
C11orf54-202ENST00000354421 WNT2BQ93097 391 aa10.07□□□□□ -0.8
C11orf54-202ENST00000354421 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
C11orf54-202ENST00000354421 XIRP1Q702N8 1843 aaKnown RBP10.06□□□□□ -0.8
C11orf54-202ENST00000354421 RTEL1-TNFRSF6BF6WH68 1400 aa10.05□□□□□ -0.8
C11orf54-202ENST00000354421 DAPK1P53355 1430 aa10.05□□□□□ -0.8
C11orf54-202ENST00000354421 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
C11orf54-202ENST00000354421 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
C11orf54-202ENST00000354421 DEPDC5O75140 1603 aa10.04□□□□□ -0.8
C11orf54-202ENST00000354421 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
C11orf54-202ENST00000354421 SHPRHQ149N8 1683 aa10.04□□□□□ -0.8
C11orf54-202ENST00000354421 NINLQ9Y2I6 1382 aa10.04□□□□□ -0.8
C11orf54-202ENST00000354421 R3HDM1Q15032 1099 aaKnown RBP10.04□□□□□ -0.8
C11orf54-202ENST00000354421 ABCC5O15440 1437 aa10.03□□□□□ -0.8
C11orf54-202ENST00000354421 NBR1Q14596 966 aa10.03□□□□□ -0.8
C11orf54-202ENST00000354421 DIP2CQ9Y2E4 1556 aa10.03□□□□□ -0.8
C11orf54-202ENST00000354421 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
C11orf54-202ENST00000354421 EVI5O60447 810 aa10.02□□□□□ -0.8
C11orf54-202ENST00000354421 HSPA6P17066 643 aa10.02□□□□□ -0.8
C11orf54-202ENST00000354421 C8orf37Q96NL8 207 aa10.02□□□□□ -0.8
C11orf54-202ENST00000354421 SLAIN2Q9P270 581 aa10.02□□□□□ -0.8
C11orf54-202ENST00000354421 ROCK2O75116 1388 aaKnown RBP10.02□□□□□ -0.81
C11orf54-202ENST00000354421 PZPP20742 1482 aa10.02□□□□□ -0.81
C11orf54-202ENST00000354421 KIF14Q15058 1648 aa10.02□□□□□ -0.81
C11orf54-202ENST00000354421 NKX1-1Q15270 411 aaPredicted RBP10.02□□□□□ -0.81
C11orf54-202ENST00000354421 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
C11orf54-202ENST00000354421 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
C11orf54-202ENST00000354421 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
C11orf54-202ENST00000354421 PNISRQ8TF01 805 aaKnown RBP10.02□□□□□ -0.81
C11orf54-202ENST00000354421 LRPPRCP42704 1394 aaKnown RBP10.01□□□□□ -0.81
C11orf54-202ENST00000354421 TCERG1O14776 1098 aaKnown RBP10□□□□□ -0.81
C11orf54-202ENST00000354421 KTN1Q86UP2 1357 aaKnown RBP10□□□□□ -0.81
C11orf54-202ENST00000354421 ABCC1P33527 1531 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms