RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
MBD1-205ENST00000353909 TECPR2O15040 1411 aa20.26■□□□□ 0.83
MBD1-205ENST00000353909 CPSF1Q10570 1443 aaKnown RBP20.26■□□□□ 0.83
MBD1-205ENST00000353909 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
MBD1-205ENST00000353909 WDR63Q8IWG1 891 aa20.25■□□□□ 0.83
MBD1-205ENST00000353909 FAM135BQ49AJ0 1406 aa20.24■□□□□ 0.83
MBD1-205ENST00000353909 DIAPH1O60610 1272 aaKnown RBP20.24■□□□□ 0.83
MBD1-205ENST00000353909 CCDC61Q9Y6R9 512 aa20.24■□□□□ 0.83
MBD1-205ENST00000353909 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
MBD1-205ENST00000353909 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
MBD1-205ENST00000353909 ADGRB2O60241 1585 aa20.23■□□□□ 0.83
MBD1-205ENST00000353909 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
MBD1-205ENST00000353909 KNDC1Q76NI1 1749 aa20.23■□□□□ 0.83
MBD1-205ENST00000353909 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
MBD1-205ENST00000353909 CPS1P31327 1500 aa20.22■□□□□ 0.83
MBD1-205ENST00000353909 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
MBD1-205ENST00000353909 C3P01024 1663 aa20.22■□□□□ 0.83
MBD1-205ENST00000353909 TSR2Q969E8 191 aaKnown RBP20.22■□□□□ 0.83
MBD1-205ENST00000353909 TRIM35Q9UPQ4 493 aa20.22■□□□□ 0.83
MBD1-205ENST00000353909 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
MBD1-205ENST00000353909 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
MBD1-205ENST00000353909 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
MBD1-205ENST00000353909 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
MBD1-205ENST00000353909 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
MBD1-205ENST00000353909 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
MBD1-205ENST00000353909 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
MBD1-205ENST00000353909 EDC4Q6P2E9 1401 aaKnown RBP20.2■□□□□ 0.82
MBD1-205ENST00000353909 PTPRUQ92729 1446 aa20.2■□□□□ 0.82
MBD1-205ENST00000353909 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.19■□□□□ 0.82
MBD1-205ENST00000353909 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
MBD1-205ENST00000353909 COG6Q9Y2V7 657 aa20.18■□□□□ 0.82
MBD1-205ENST00000353909 TCERG1O14776 1098 aaKnown RBP20.17■□□□□ 0.82
MBD1-205ENST00000353909 RRS1Q15050 365 aaKnown RBP20.17■□□□□ 0.82
MBD1-205ENST00000353909 HMOX1P09601 288 aa20.17■□□□□ 0.82
MBD1-205ENST00000353909 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
MBD1-205ENST00000353909 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
MBD1-205ENST00000353909 RIPK4P57078 832 aa20.17■□□□□ 0.82
MBD1-205ENST00000353909 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
MBD1-205ENST00000353909 FER1L4A9Z1Z3 1794 aa20.16■□□□□ 0.82
MBD1-205ENST00000353909 PRKAR2BP31323 418 aa20.15■□□□□ 0.82
MBD1-205ENST00000353909 ANP32EQ9BTT0 268 aa20.15■□□□□ 0.82
MBD1-205ENST00000353909 RLBP1P12271 317 aa20.15■□□□□ 0.82
MBD1-205ENST00000353909 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
MBD1-205ENST00000353909 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
MBD1-205ENST00000353909 PHACTR3Q96KR7 559 aa20.14■□□□□ 0.82
MBD1-205ENST00000353909 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
MBD1-205ENST00000353909 MON2Q7Z3U7 1717 aa20.14■□□□□ 0.81
MBD1-205ENST00000353909 LRRC7Q96NW7 1537 aa20.13■□□□□ 0.81
MBD1-205ENST00000353909 PDE4AP27815 886 aa20.13■□□□□ 0.81
MBD1-205ENST00000353909 PDE3AQ14432 1141 aa20.13■□□□□ 0.81
MBD1-205ENST00000353909 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
MBD1-205ENST00000353909 COG3Q96JB2 828 aa20.13■□□□□ 0.81
MBD1-205ENST00000353909 CENPQQ7L2Z9 268 aaPredicted RBP20.13■□□□□ 0.81
MBD1-205ENST00000353909 ACEP12821 1306 aa20.13■□□□□ 0.81
MBD1-205ENST00000353909 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
MBD1-205ENST00000353909 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
MBD1-205ENST00000353909 FCHSD2O94868 740 aa20.12■□□□□ 0.81
MBD1-205ENST00000353909 ARHGAP23Q9P227 1491 aa20.11■□□□□ 0.81
MBD1-205ENST00000353909 AKAP12Q02952 1782 aa20.11■□□□□ 0.81
MBD1-205ENST00000353909 IGHDP01880 384 aa20.11■□□□□ 0.81
MBD1-205ENST00000353909 IL13P35225 146 aa20.11■□□□□ 0.81
MBD1-205ENST00000353909 SLIT1O75093 1534 aa20.1■□□□□ 0.81
MBD1-205ENST00000353909 ZNF692Q9BU19 519 aaPredicted RBP20.1■□□□□ 0.81
MBD1-205ENST00000353909 BACH2Q9BYV9 841 aa20.1■□□□□ 0.81
MBD1-205ENST00000353909 ITSN1Q15811 1721 aa20.1■□□□□ 0.81
MBD1-205ENST00000353909 THEMISQ8N1K5 641 aaPredicted RBP20.09■□□□□ 0.81
MBD1-205ENST00000353909 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
MBD1-205ENST00000353909 PMFBP1Q8TBY8 1022 aa20.08■□□□□ 0.81
MBD1-205ENST00000353909 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.81
MBD1-205ENST00000353909 MS4A1P11836 297 aa20.08■□□□□ 0.8
MBD1-205ENST00000353909 TBX22Q9Y458 520 aa20.08■□□□□ 0.8
MBD1-205ENST00000353909 AATKQ6ZMQ8 1374 aa20.07■□□□□ 0.8
MBD1-205ENST00000353909 SOX12O15370 315 aa20.06■□□□□ 0.8
MBD1-205ENST00000353909 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
MBD1-205ENST00000353909 PLEKHG3A1L390 1219 aa20.06■□□□□ 0.8
MBD1-205ENST00000353909 CDK12Q9NYV4 1490 aaPredicted RBP20.06■□□□□ 0.8
MBD1-205ENST00000353909 RGS3P49796 1198 aa20.05■□□□□ 0.8
MBD1-205ENST00000353909 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
MBD1-205ENST00000353909 PNNQ9H307 717 aaKnown RBP20.05■□□□□ 0.8
MBD1-205ENST00000353909 TOPAZ1Q8N9V7 1692 aa20.04■□□□□ 0.8
MBD1-205ENST00000353909 LAS1LQ9Y4W2 734 aaKnown RBP20.04■□□□□ 0.8
MBD1-205ENST00000353909 PAK3O75914 559 aaPredicted RBP20.03■□□□□ 0.8
MBD1-205ENST00000353909 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
MBD1-205ENST00000353909 USP6P35125 1406 aa20.03■□□□□ 0.8
MBD1-205ENST00000353909 KCNA6P17658 529 aa20.03■□□□□ 0.8
MBD1-205ENST00000353909 IL16Q14005 1332 aa20.02■□□□□ 0.8
MBD1-205ENST00000353909 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
MBD1-205ENST00000353909 PCDHB15Q9Y5E8 787 aa20.02■□□□□ 0.8
MBD1-205ENST00000353909 RGPD8O14715 1765 aaPredicted RBP20.02■□□□□ 0.8
MBD1-205ENST00000353909 ANP32AP39687 249 aaKnown RBP20.02■□□□□ 0.79
MBD1-205ENST00000353909 NRKQ7Z2Y5 1582 aa20.01■□□□□ 0.79
MBD1-205ENST00000353909 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
MBD1-205ENST00000353909 NEFMP07197 916 aa20.01■□□□□ 0.79
MBD1-205ENST00000353909 OVOS2A0A0J9YW53 1432 aa20■□□□□ 0.79
MBD1-205ENST00000353909 OVOS2Q6IE36 1432 aa20■□□□□ 0.79
MBD1-205ENST00000353909 FAM83GA6ND36 823 aa19.99■□□□□ 0.79
MBD1-205ENST00000353909 HSP90AB2PQ58FF8 381 aa19.99■□□□□ 0.79
MBD1-205ENST00000353909 ZKSCAN2Q63HK3 967 aa19.99■□□□□ 0.79
MBD1-205ENST00000353909 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
MBD1-205ENST00000353909 TRIM27P14373 513 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms