RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.91■■■■□ 3.5
SSBP4-202ENST00000348495 CNGB1Q14028 1251 aaPredicted RBP36.89■■■■□ 3.5
SSBP4-202ENST00000348495 RALBP1Q15311 655 aa36.89■■■■□ 3.5
SSBP4-202ENST00000348495 PSME1Q06323 249 aa36.88■■■■□ 3.49
SSBP4-202ENST00000348495 TTC21AQ8NDW8 1320 aa36.88■■■■□ 3.49
SSBP4-202ENST00000348495 ANKRD26Q9UPS8 1709 aa36.87■■■■□ 3.49
SSBP4-202ENST00000348495 CERKQ8TCT0 537 aa36.85■■■■□ 3.49
SSBP4-202ENST00000348495 NPHP3Q7Z494 1330 aa36.85■■■■□ 3.49
SSBP4-202ENST00000348495 NME9Q86XW9 330 aa36.85■■■■□ 3.49
SSBP4-202ENST00000348495 TRPM3Q9HCF6 1732 aaPredicted RBP36.84■■■■□ 3.49
SSBP4-202ENST00000348495 GGNBP2Q9H3C7 697 aa36.84■■■■□ 3.49
SSBP4-202ENST00000348495 PXDNQ92626 1479 aa36.82■■■■□ 3.48
SSBP4-202ENST00000348495 KRT28Q7Z3Y7 464 aa36.82■■■■□ 3.48
SSBP4-202ENST00000348495 PIK3C2AO00443 1686 aa36.81■■■■□ 3.48
SSBP4-202ENST00000348495 DDX17Q92841 729 aaKnown RBP36.8■■■■□ 3.48
SSBP4-202ENST00000348495 ROBO1Q9Y6N7 1651 aa36.8■■■■□ 3.48
SSBP4-202ENST00000348495 XPCQ01831 940 aaPredicted RBP36.79■■■■□ 3.48
SSBP4-202ENST00000348495 NHSL1Q5SYE7 1610 aa36.79■■■■□ 3.48
SSBP4-202ENST00000348495 TOM1O60784 492 aa36.79■■■■□ 3.48
SSBP4-202ENST00000348495 MORC1Q86VD1 984 aa36.78■■■■□ 3.48
SSBP4-202ENST00000348495 ZRANB1Q9UGI0 708 aa36.77■■■■□ 3.48
SSBP4-202ENST00000348495 USP31Q70CQ4 1352 aa36.77■■■■□ 3.48
SSBP4-202ENST00000348495 OVOS2A0A0J9YW53 1432 aa36.77■■■■□ 3.48
SSBP4-202ENST00000348495 OVOS2Q6IE36 1432 aa36.77■■■■□ 3.48
SSBP4-202ENST00000348495 USP54Q70EL1 1684 aa36.76■■■■□ 3.48
SSBP4-202ENST00000348495 SBNO1A3KN83 1393 aa36.75■■■■□ 3.47
SSBP4-202ENST00000348495 MYBBP1AQ9BQG0 1328 aaKnown RBP36.75■■■■□ 3.47
SSBP4-202ENST00000348495 SOS2Q07890 1332 aaPredicted RBP36.74■■■■□ 3.47
SSBP4-202ENST00000348495 PAK3O75914 559 aaPredicted RBP36.74■■■■□ 3.47
SSBP4-202ENST00000348495 ALS2Q96Q42 1657 aa36.72■■■■□ 3.47
SSBP4-202ENST00000348495 CCER2I3L3R5 266 aa36.71■■■■□ 3.47
SSBP4-202ENST00000348495 COG3Q96JB2 828 aa36.71■■■■□ 3.47
SSBP4-202ENST00000348495 MARF1Q9Y4F3 1742 aaKnown RBP36.71■■■■□ 3.47
SSBP4-202ENST00000348495 UBAP1LF5GYI3 381 aa36.71■■■■□ 3.47
SSBP4-202ENST00000348495 ABTB2Q8N961 1025 aa36.71■■■■□ 3.47
SSBP4-202ENST00000348495 AHDC1Q5TGY3 1603 aaPredicted RBP36.7■■■■□ 3.47
SSBP4-202ENST00000348495 PPP2R1AP30153 589 aa36.7■■■■□ 3.47
SSBP4-202ENST00000348495 SCAF1Q9H7N4 1312 aaKnown RBP36.69■■■■□ 3.46
SSBP4-202ENST00000348495 TNS3Q68CZ2 1445 aa36.67■■■■□ 3.46
SSBP4-202ENST00000348495 NLRP6P59044 892 aa36.65■■■■□ 3.46
SSBP4-202ENST00000348495 SPATA31A3Q5VYP0 1347 aa36.65■■■■□ 3.46
SSBP4-202ENST00000348495 NLRP13Q86W25 1043 aa36.65■■■■□ 3.46
SSBP4-202ENST00000348495 TNNT2P45379 298 aaPredicted RBP36.64■■■■□ 3.46
SSBP4-202ENST00000348495 NUTM2GQ5VZR2 741 aa36.62■■■■□ 3.45
SSBP4-202ENST00000348495 AATKQ6ZMQ8 1374 aa36.61■■■■□ 3.45
SSBP4-202ENST00000348495 CCDC184Q52MB2 194 aa36.61■■■■□ 3.45
SSBP4-202ENST00000348495 PIP4K2BP78356 416 aa36.6■■■■□ 3.45
SSBP4-202ENST00000348495 ARHGEF10O15013 1369 aa36.58■■■■□ 3.45
SSBP4-202ENST00000348495 USP19O94966 1318 aa36.56■■■■□ 3.44
SSBP4-202ENST00000348495 LMOD2Q6P5Q4 547 aa36.56■■■■□ 3.44
SSBP4-202ENST00000348495 SLIT3O75094 1523 aa36.55■■■■□ 3.44
SSBP4-202ENST00000348495 FBLN1P23142 703 aa36.54■■■■□ 3.44
SSBP4-202ENST00000348495 MED1Q15648 1581 aaPredicted RBP36.53■■■■□ 3.44
SSBP4-202ENST00000348495 SMG6Q86US8 1419 aaKnown RBP36.53■■■■□ 3.44
SSBP4-202ENST00000348495 MRS2Q9HD23 443 aa36.52■■■■□ 3.44
SSBP4-202ENST00000348495 COL16A1Q07092 1604 aaPredicted RBP36.52■■■■□ 3.44
SSBP4-202ENST00000348495 MAP2P11137 1827 aaKnown RBP36.52■■■■□ 3.44
SSBP4-202ENST00000348495 PHLPP1O60346 1717 aa36.52■■■■□ 3.44
SSBP4-202ENST00000348495 MTHFSP49914 203 aa36.51■■■■□ 3.44
SSBP4-202ENST00000348495 POLKQ9UBT6 870 aa36.51■■■■□ 3.44
SSBP4-202ENST00000348495 NFAT5O94916 1531 aa36.51■■■■□ 3.44
SSBP4-202ENST00000348495 CRYBG1Q9Y4K1 1723 aa36.5■■■■□ 3.43
SSBP4-202ENST00000348495 LRRC59Q96AG4 307 aaKnown RBP36.48■■■■□ 3.43
SSBP4-202ENST00000348495 KCNH5Q8NCM2 988 aa36.47■■■■□ 3.43
SSBP4-202ENST00000348495 PHRF1Q9P1Y6 1649 aaKnown RBP36.45■■■■□ 3.43
SSBP4-202ENST00000348495 RRS1Q15050 365 aaKnown RBP36.45■■■■□ 3.43
SSBP4-202ENST00000348495 SOX12O15370 315 aa36.45■■■■□ 3.43
SSBP4-202ENST00000348495 GCP02774 474 aa36.45■■■■□ 3.43
SSBP4-202ENST00000348495 EMILIN1Q9Y6C2 1016 aa36.45■■■■□ 3.43
SSBP4-202ENST00000348495 PNPLA6Q8IY17 1366 aa36.43■■■■□ 3.42
SSBP4-202ENST00000348495 INSRP06213 1382 aa36.42■■■■□ 3.42
SSBP4-202ENST00000348495 CDK12Q9NYV4 1490 aaPredicted RBP36.42■■■■□ 3.42
SSBP4-202ENST00000348495 MAP3K19Q56UN5 1328 aa36.42■■■■□ 3.42
SSBP4-202ENST00000348495 PEAK1Q9H792 1746 aa36.4■■■■□ 3.42
SSBP4-202ENST00000348495 COL3A1P02461 1466 aaPredicted RBP36.4■■■■□ 3.42
SSBP4-202ENST00000348495 COL22A1Q8NFW1 1626 aaPredicted RBP36.39■■■■□ 3.42
SSBP4-202ENST00000348495 PNISRQ8TF01 805 aaKnown RBP36.39■■■■□ 3.42
SSBP4-202ENST00000348495 CABLES1Q8TDN4 633 aa36.38■■■■□ 3.41
SSBP4-202ENST00000348495 ABCA3Q99758 1704 aa36.38■■■■□ 3.41
SSBP4-202ENST00000348495 KIF24Q5T7B8 1368 aa36.37■■■■□ 3.41
SSBP4-202ENST00000348495 CFAP53Q96M91 514 aa36.37■■■■□ 3.41
SSBP4-202ENST00000348495 LTN1O94822 1766 aa36.36■■■■□ 3.41
SSBP4-202ENST00000348495 PPM1GO15355 546 aaPredicted RBP36.35■■■■□ 3.41
SSBP4-202ENST00000348495 PLEKHG5O94827 1062 aa36.35■■■■□ 3.41
SSBP4-202ENST00000348495 ARHGEF25Q86VW2 580 aa36.34■■■■□ 3.41
SSBP4-202ENST00000348495 FLT4P35916 1363 aa36.32■■■■□ 3.41
SSBP4-202ENST00000348495 ILDR1Q86SU0 546 aaPredicted RBP36.32■■■■□ 3.4
SSBP4-202ENST00000348495 SHPRHQ149N8 1683 aa36.32■■■■□ 3.4
SSBP4-202ENST00000348495 RTL1A6NKG5 1358 aa36.31■■■■□ 3.4
SSBP4-202ENST00000348495 CPDO75976 1380 aa36.29■■■■□ 3.4
SSBP4-202ENST00000348495 AMPHP49418 695 aa36.28■■■■□ 3.4
SSBP4-202ENST00000348495 HOXC9P31274 260 aa36.27■■■■□ 3.4
SSBP4-202ENST00000348495 HSP90AB2PQ58FF8 381 aa36.26■■■■□ 3.4
SSBP4-202ENST00000348495 ZC3H6P61129 1189 aaKnown RBP36.25■■■■□ 3.39
SSBP4-202ENST00000348495 IP6K1Q92551 441 aa36.25■■■■□ 3.39
SSBP4-202ENST00000348495 DIAPH1O60610 1272 aaKnown RBP36.24■■■■□ 3.39
SSBP4-202ENST00000348495 FAM9BQ8IZU0 186 aa36.23■■■■□ 3.39
SSBP4-202ENST00000348495 KIAA0232Q92628 1395 aa36.22■■■■□ 3.39
SSBP4-202ENST00000348495 ABCC6O95255 1503 aa36.22■■■■□ 3.39
SSBP4-202ENST00000348495 HSPA1LP34931 641 aa36.22■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms