RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
SMARCC2-202ENST00000347471 ACEP12821 1306 aa22.31■■□□□ 1.16
SMARCC2-202ENST00000347471 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
SMARCC2-202ENST00000347471 POLKQ9UBT6 870 aa22.31■■□□□ 1.16
SMARCC2-202ENST00000347471 LMOD2Q6P5Q4 547 aa22.3■■□□□ 1.16
SMARCC2-202ENST00000347471 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
SMARCC2-202ENST00000347471 THUMPD2Q9BTF0 503 aaKnown RBP22.29■■□□□ 1.16
SMARCC2-202ENST00000347471 NSD2O96028 1365 aa22.29■■□□□ 1.16
SMARCC2-202ENST00000347471 ZNF521Q96K83 1311 aa22.28■■□□□ 1.16
SMARCC2-202ENST00000347471 PANK1Q8TE04 598 aa22.27■■□□□ 1.16
SMARCC2-202ENST00000347471 ELL2O00472 640 aaPredicted RBP22.26■■□□□ 1.15
SMARCC2-202ENST00000347471 ANKLE2Q86XL3 938 aa22.26■■□□□ 1.15
SMARCC2-202ENST00000347471 NPM2Q86SE8 214 aaKnown RBP22.26■■□□□ 1.15
SMARCC2-202ENST00000347471 COG6Q9Y2V7 657 aa22.26■■□□□ 1.15
SMARCC2-202ENST00000347471 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
SMARCC2-202ENST00000347471 LTV1Q96GA3 475 aaPredicted RBP22.24■■□□□ 1.15
SMARCC2-202ENST00000347471 TCERG1O14776 1098 aaKnown RBP22.24■■□□□ 1.15
SMARCC2-202ENST00000347471 BCL11AQ9H165 835 aa22.24■■□□□ 1.15
SMARCC2-202ENST00000347471 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
SMARCC2-202ENST00000347471 PLEKHG1Q9ULL1 1385 aa22.22■■□□□ 1.15
SMARCC2-202ENST00000347471 TBX22Q9Y458 520 aa22.22■■□□□ 1.15
SMARCC2-202ENST00000347471 CD163L1Q9NR16 1453 aa22.22■■□□□ 1.15
SMARCC2-202ENST00000347471 XPCQ01831 940 aaPredicted RBP22.22■■□□□ 1.15
SMARCC2-202ENST00000347471 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
SMARCC2-202ENST00000347471 ZNF692Q9BU19 519 aaPredicted RBP22.21■■□□□ 1.15
SMARCC2-202ENST00000347471 NLRP6P59044 892 aa22.21■■□□□ 1.15
SMARCC2-202ENST00000347471 TNNQ9UQP3 1299 aa22.21■■□□□ 1.15
SMARCC2-202ENST00000347471 RGS3P49796 1198 aa22.2■■□□□ 1.14
SMARCC2-202ENST00000347471 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
SMARCC2-202ENST00000347471 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
SMARCC2-202ENST00000347471 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
SMARCC2-202ENST00000347471 NLRP1Q9C000 1473 aa22.19■■□□□ 1.14
SMARCC2-202ENST00000347471 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
SMARCC2-202ENST00000347471 NKTRP30414 1462 aaKnown RBP22.18■■□□□ 1.14
SMARCC2-202ENST00000347471 INSRP06213 1382 aa22.18■■□□□ 1.14
SMARCC2-202ENST00000347471 AMPHP49418 695 aa22.18■■□□□ 1.14
SMARCC2-202ENST00000347471 SMC4Q9NTJ3 1288 aa22.18■■□□□ 1.14
SMARCC2-202ENST00000347471 HSP90AB2PQ58FF8 381 aa22.17■■□□□ 1.14
SMARCC2-202ENST00000347471 PTPRUQ92729 1446 aa22.17■■□□□ 1.14
SMARCC2-202ENST00000347471 SULT6B1Q6IMI4 303 aa22.17■■□□□ 1.14
SMARCC2-202ENST00000347471 AEBP1Q8IUX7 1158 aa22.17■■□□□ 1.14
SMARCC2-202ENST00000347471 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
SMARCC2-202ENST00000347471 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
SMARCC2-202ENST00000347471 PNNQ9H307 717 aaKnown RBP22.15■■□□□ 1.14
SMARCC2-202ENST00000347471 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
SMARCC2-202ENST00000347471 ABTB2Q8N961 1025 aa22.15■■□□□ 1.14
SMARCC2-202ENST00000347471 FAM83GA6ND36 823 aa22.14■■□□□ 1.14
SMARCC2-202ENST00000347471 WDR63Q8IWG1 891 aa22.14■■□□□ 1.14
SMARCC2-202ENST00000347471 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
SMARCC2-202ENST00000347471 ERICH6Q7L0X2 663 aa22.14■■□□□ 1.13
SMARCC2-202ENST00000347471 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.13
SMARCC2-202ENST00000347471 FCHSD2O94868 740 aa22.13■■□□□ 1.13
SMARCC2-202ENST00000347471 TRIM35Q9UPQ4 493 aa22.13■■□□□ 1.13
SMARCC2-202ENST00000347471 FANCIQ9NVI1 1328 aa22.13■■□□□ 1.13
SMARCC2-202ENST00000347471 FAM135BQ49AJ0 1406 aa22.12■■□□□ 1.13
SMARCC2-202ENST00000347471 RARSP54136 660 aaKnown RBP22.12■■□□□ 1.13
SMARCC2-202ENST00000347471 PLEKHF1Q96S99 279 aa22.12■■□□□ 1.13
SMARCC2-202ENST00000347471 TRMT2AQ8IZ69 625 aaKnown RBP22.12■■□□□ 1.13
SMARCC2-202ENST00000347471 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
SMARCC2-202ENST00000347471 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
SMARCC2-202ENST00000347471 NRXN3Q9Y4C0 1643 aa22.09■■□□□ 1.13
SMARCC2-202ENST00000347471 PSME1Q06323 249 aa22.09■■□□□ 1.13
SMARCC2-202ENST00000347471 DLC1Q96QB1 1528 aa22.09■■□□□ 1.13
SMARCC2-202ENST00000347471 HSPA2P54652 639 aa22.09■■□□□ 1.13
SMARCC2-202ENST00000347471 ATP7BP35670 1465 aa22.09■■□□□ 1.13
SMARCC2-202ENST00000347471 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
SMARCC2-202ENST00000347471 CPS1P31327 1500 aa22.08■■□□□ 1.13
SMARCC2-202ENST00000347471 IL13P35225 146 aa22.08■■□□□ 1.13
SMARCC2-202ENST00000347471 EIF4A2Q14240 407 aaKnown RBP22.08■■□□□ 1.12
SMARCC2-202ENST00000347471 FOXO3O43524 673 aa22.07■■□□□ 1.12
SMARCC2-202ENST00000347471 PROSER2Q86WR7 435 aaPredicted RBP22.07■■□□□ 1.12
SMARCC2-202ENST00000347471 CPSF1Q10570 1443 aaKnown RBP22.06■■□□□ 1.12
SMARCC2-202ENST00000347471 RLBP1P12271 317 aa22.06■■□□□ 1.12
SMARCC2-202ENST00000347471 PLEKHG3A1L390 1219 aa22.06■■□□□ 1.12
SMARCC2-202ENST00000347471 ITPRIPQ8IWB1 547 aa22.06■■□□□ 1.12
SMARCC2-202ENST00000347471 NFE2L2Q16236 605 aa22.05■■□□□ 1.12
SMARCC2-202ENST00000347471 FER1L4A9Z1Z3 1794 aa22.05■■□□□ 1.12
SMARCC2-202ENST00000347471 C3P01024 1663 aa22.05■■□□□ 1.12
SMARCC2-202ENST00000347471 SSH1Q8WYL5 1049 aa22.04■■□□□ 1.12
SMARCC2-202ENST00000347471 MCM10Q7L590 875 aa22.04■■□□□ 1.12
SMARCC2-202ENST00000347471 PHF8Q9UPP1 1060 aa22.04■■□□□ 1.12
SMARCC2-202ENST00000347471 MAP3K19Q56UN5 1328 aa22.03■■□□□ 1.12
SMARCC2-202ENST00000347471 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
SMARCC2-202ENST00000347471 TECPR2O15040 1411 aa22.03■■□□□ 1.12
SMARCC2-202ENST00000347471 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
SMARCC2-202ENST00000347471 MIS18AQ9NYP9 233 aa22.02■■□□□ 1.12
SMARCC2-202ENST00000347471 ORAI2Q96SN7 254 aa22.01■■□□□ 1.11
SMARCC2-202ENST00000347471 ZKSCAN2Q63HK3 967 aa22.01■■□□□ 1.11
SMARCC2-202ENST00000347471 NOB1Q9ULX3 412 aaKnown RBP22■■□□□ 1.11
SMARCC2-202ENST00000347471 RIMS1Q86UR5 1692 aaKnown RBP22■■□□□ 1.11
SMARCC2-202ENST00000347471 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
SMARCC2-202ENST00000347471 USP6P35125 1406 aa21.99■■□□□ 1.11
SMARCC2-202ENST00000347471 TSPYL6Q8N831 410 aa21.98■■□□□ 1.11
SMARCC2-202ENST00000347471 DZIP1LQ8IYY4 767 aaKnown RBP21.98■■□□□ 1.11
SMARCC2-202ENST00000347471 ANP32AP39687 249 aaKnown RBP21.97■■□□□ 1.11
SMARCC2-202ENST00000347471 KRT24Q2M2I5 525 aa21.97■■□□□ 1.11
SMARCC2-202ENST00000347471 PNPLA6Q8IY17 1366 aa21.97■■□□□ 1.11
SMARCC2-202ENST00000347471 IGHDP01880 384 aa21.97■■□□□ 1.11
SMARCC2-202ENST00000347471 CENPQQ7L2Z9 268 aaPredicted RBP21.97■■□□□ 1.11
SMARCC2-202ENST00000347471 SHPRHQ149N8 1683 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms