RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TMPOP42166 694 aaKnown RBP27.6■■■□□ 2.01
CCDC38-201ENST00000344280 TRIM35Q9UPQ4 493 aa27.6■■■□□ 2.01
CCDC38-201ENST00000344280 RIMS2Q9UQ26 1411 aa27.6■■■□□ 2.01
CCDC38-201ENST00000344280 SPATA31D1Q6ZQQ2 1576 aa27.6■■■□□ 2.01
CCDC38-201ENST00000344280 PPP6R1Q9UPN7 881 aa27.6■■■□□ 2.01
CCDC38-201ENST00000344280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.58■■■□□ 2.01
CCDC38-201ENST00000344280 LAS1LQ9Y4W2 734 aaKnown RBP27.58■■■□□ 2.01
CCDC38-201ENST00000344280 PCDHB15Q9Y5E8 787 aa27.57■■■□□ 2
CCDC38-201ENST00000344280 SETD1AO15047 1707 aaKnown RBP27.56■■■□□ 2
CCDC38-201ENST00000344280 PNPLA6Q8IY17 1366 aa27.55■■■□□ 2
CCDC38-201ENST00000344280 DIAPH1O60610 1272 aaKnown RBP27.55■■■□□ 2
CCDC38-201ENST00000344280 DEKP35659 375 aaKnown RBP27.55■■■□□ 2
CCDC38-201ENST00000344280 MAPK8IP3Q9UPT6 1336 aa27.54■■■□□ 2
CCDC38-201ENST00000344280 EXOSC9Q06265 439 aaKnown RBP27.53■■■□□ 2
CCDC38-201ENST00000344280 DLC1Q96QB1 1528 aa27.53■■■□□ 2
CCDC38-201ENST00000344280 SLC4A3P48751 1232 aa27.52■■■□□ 2
CCDC38-201ENST00000344280 KIF20BQ96Q89 1820 aa27.52■■■□□ 2
CCDC38-201ENST00000344280 DDRGK1Q96HY6 314 aa27.52■■■□□ 2
CCDC38-201ENST00000344280 PPM1GO15355 546 aaPredicted RBP27.51■■□□□ 1.99
CCDC38-201ENST00000344280 RIPK4P57078 832 aa27.51■■□□□ 1.99
CCDC38-201ENST00000344280 METP08581 1390 aa27.5■■□□□ 1.99
CCDC38-201ENST00000344280 POLKQ9UBT6 870 aa27.5■■□□□ 1.99
CCDC38-201ENST00000344280 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
CCDC38-201ENST00000344280 BCL11AQ9H165 835 aa27.48■■□□□ 1.99
CCDC38-201ENST00000344280 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
CCDC38-201ENST00000344280 ZKSCAN2Q63HK3 967 aa27.46■■□□□ 1.99
CCDC38-201ENST00000344280 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
CCDC38-201ENST00000344280 NCKAP5LQ9HCH0 1330 aa27.46■■□□□ 1.99
CCDC38-201ENST00000344280 ATP7BP35670 1465 aa27.46■■□□□ 1.99
CCDC38-201ENST00000344280 MVPQ14764 893 aaKnown RBP27.46■■□□□ 1.99
CCDC38-201ENST00000344280 RTL5Q5HYW3 569 aaPredicted RBP27.46■■□□□ 1.99
CCDC38-201ENST00000344280 PMFBP1Q8TBY8 1022 aa27.46■■□□□ 1.99
CCDC38-201ENST00000344280 SMC4Q9NTJ3 1288 aa27.46■■□□□ 1.99
CCDC38-201ENST00000344280 ZMYM3Q14202 1370 aa27.45■■□□□ 1.98
CCDC38-201ENST00000344280 WASLO00401 505 aaPredicted RBP27.44■■□□□ 1.98
CCDC38-201ENST00000344280 CT47B1P0C2W7 299 aaPredicted RBP27.44■■□□□ 1.98
CCDC38-201ENST00000344280 AAMPQ13685 434 aa27.43■■□□□ 1.98
CCDC38-201ENST00000344280 DZIP1LQ8IYY4 767 aaKnown RBP27.43■■□□□ 1.98
CCDC38-201ENST00000344280 ZRANB1Q9UGI0 708 aa27.43■■□□□ 1.98
CCDC38-201ENST00000344280 LRRC7Q96NW7 1537 aa27.43■■□□□ 1.98
CCDC38-201ENST00000344280 TRIM27P14373 513 aa27.42■■□□□ 1.98
CCDC38-201ENST00000344280 PRKAR2BP31323 418 aa27.42■■□□□ 1.98
CCDC38-201ENST00000344280 FTSJ3Q8IY81 847 aaKnown RBP27.42■■□□□ 1.98
CCDC38-201ENST00000344280 RSPH6AQ9H0K4 717 aa27.42■■□□□ 1.98
CCDC38-201ENST00000344280 SEC24BO95487 1268 aa27.42■■□□□ 1.98
CCDC38-201ENST00000344280 NME9Q86XW9 330 aa27.42■■□□□ 1.98
CCDC38-201ENST00000344280 EMILIN1Q9Y6C2 1016 aa27.42■■□□□ 1.98
CCDC38-201ENST00000344280 PPIP5K1Q6PFW1 1433 aa27.41■■□□□ 1.98
CCDC38-201ENST00000344280 IL16Q14005 1332 aa27.41■■□□□ 1.98
CCDC38-201ENST00000344280 FCHSD2O94868 740 aa27.41■■□□□ 1.98
CCDC38-201ENST00000344280 CPSF1Q10570 1443 aaKnown RBP27.41■■□□□ 1.98
CCDC38-201ENST00000344280 NEFMP07197 916 aa27.4■■□□□ 1.98
CCDC38-201ENST00000344280 MAP2P11137 1827 aaKnown RBP27.4■■□□□ 1.98
CCDC38-201ENST00000344280 USP19O94966 1318 aa27.4■■□□□ 1.98
CCDC38-201ENST00000344280 HMOX1P09601 288 aa27.39■■□□□ 1.98
CCDC38-201ENST00000344280 PDZRN3Q9UPQ7 1066 aa27.39■■□□□ 1.98
CCDC38-201ENST00000344280 CDC42BPGQ6DT37 1551 aa27.39■■□□□ 1.98
CCDC38-201ENST00000344280 PHACTR3Q96KR7 559 aa27.39■■□□□ 1.98
CCDC38-201ENST00000344280 ESF1Q9H501 851 aaKnown RBP27.38■■□□□ 1.97
CCDC38-201ENST00000344280 VIRMAQ69YN4 1812 aaKnown RBP27.38■■□□□ 1.97
CCDC38-201ENST00000344280 FAM135BQ49AJ0 1406 aa27.38■■□□□ 1.97
CCDC38-201ENST00000344280 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.38■■□□□ 1.97
CCDC38-201ENST00000344280 NOB1Q9ULX3 412 aaKnown RBP27.38■■□□□ 1.97
CCDC38-201ENST00000344280 PNNQ9H307 717 aaKnown RBP27.37■■□□□ 1.97
CCDC38-201ENST00000344280 NUDT16Q96DE0 195 aaKnown RBP27.37■■□□□ 1.97
CCDC38-201ENST00000344280 RWDD1Q9H446 243 aaPredicted RBP27.36■■□□□ 1.97
CCDC38-201ENST00000344280 EDC4Q6P2E9 1401 aaKnown RBP27.36■■□□□ 1.97
CCDC38-201ENST00000344280 KIF13AQ9H1H9 1805 aa27.36■■□□□ 1.97
CCDC38-201ENST00000344280 ATF7IPQ6VMQ6 1270 aa27.35■■□□□ 1.97
CCDC38-201ENST00000344280 THUMPD2Q9BTF0 503 aaKnown RBP27.34■■□□□ 1.97
CCDC38-201ENST00000344280 ITPRIPQ8IWB1 547 aa27.33■■□□□ 1.97
CCDC38-201ENST00000344280 CPS1P31327 1500 aa27.33■■□□□ 1.97
CCDC38-201ENST00000344280 IL13P35225 146 aa27.32■■□□□ 1.96
CCDC38-201ENST00000344280 DAXXQ9UER7 740 aaPredicted RBP27.32■■□□□ 1.96
CCDC38-201ENST00000344280 RRS1Q15050 365 aaKnown RBP27.31■■□□□ 1.96
CCDC38-201ENST00000344280 CCDC61Q9Y6R9 512 aa27.31■■□□□ 1.96
CCDC38-201ENST00000344280 TMEM57Q8N5G2 664 aa27.3■■□□□ 1.96
CCDC38-201ENST00000344280 TNRQ92752 1358 aa27.3■■□□□ 1.96
CCDC38-201ENST00000344280 PRR36Q9H6K5 1346 aa27.29■■□□□ 1.96
CCDC38-201ENST00000344280 TECPR2O15040 1411 aa27.28■■□□□ 1.96
CCDC38-201ENST00000344280 NFE2L2Q16236 605 aa27.28■■□□□ 1.96
CCDC38-201ENST00000344280 DDX19BQ9UMR2 479 aa27.28■■□□□ 1.96
CCDC38-201ENST00000344280 ROBO2Q9HCK4 1378 aa27.27■■□□□ 1.96
CCDC38-201ENST00000344280 USP35Q9P2H5 1018 aa27.27■■□□□ 1.96
CCDC38-201ENST00000344280 TMEM2Q9UHN6 1383 aa27.26■■□□□ 1.95
CCDC38-201ENST00000344280 COG3Q96JB2 828 aa27.26■■□□□ 1.95
CCDC38-201ENST00000344280 KNDC1Q76NI1 1749 aa27.26■■□□□ 1.95
CCDC38-201ENST00000344280 CDK12Q9NYV4 1490 aaPredicted RBP27.26■■□□□ 1.95
CCDC38-201ENST00000344280 AATKQ6ZMQ8 1374 aa27.25■■□□□ 1.95
CCDC38-201ENST00000344280 SIRT1Q96EB6 747 aa27.24■■□□□ 1.95
CCDC38-201ENST00000344280 KIF16BQ96L93 1317 aa27.24■■□□□ 1.95
CCDC38-201ENST00000344280 HDGFP51858 240 aaKnown RBP27.24■■□□□ 1.95
CCDC38-201ENST00000344280 MON2Q7Z3U7 1717 aa27.24■■□□□ 1.95
CCDC38-201ENST00000344280 ALDH1L2Q3SY69 923 aa27.23■■□□□ 1.95
CCDC38-201ENST00000344280 TSPYL6Q8N831 410 aa27.23■■□□□ 1.95
CCDC38-201ENST00000344280 ZBTB40Q9NUA8 1239 aa27.23■■□□□ 1.95
CCDC38-201ENST00000344280 HDAC1Q13547 482 aaPredicted RBP27.22■■□□□ 1.95
CCDC38-201ENST00000344280 UBR1Q8IWV7 1749 aa27.22■■□□□ 1.95
CCDC38-201ENST00000344280 NFKBIBQ15653 356 aa27.21■■□□□ 1.95
CCDC38-201ENST00000344280 ADAMTS13Q76LX8 1427 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms