RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 CT47B1P0C2W7 299 aaPredicted RBP15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 ZMYND15Q9H091 742 aa15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 KIF20BQ96Q89 1820 aa15.79■□□□□ 0.12
UBE2L3-201ENST00000342192 USP19O94966 1318 aa15.78■□□□□ 0.12
UBE2L3-201ENST00000342192 ARHGEF40Q8TER5 1519 aa15.77■□□□□ 0.12
UBE2L3-201ENST00000342192 FYB1O15117 783 aa15.77■□□□□ 0.12
UBE2L3-201ENST00000342192 POGKQ9P215 609 aa15.77■□□□□ 0.12
UBE2L3-201ENST00000342192 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.11
UBE2L3-201ENST00000342192 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
UBE2L3-201ENST00000342192 TMPOP42166 694 aaKnown RBP15.76■□□□□ 0.11
UBE2L3-201ENST00000342192 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
UBE2L3-201ENST00000342192 NFKBIBQ15653 356 aa15.76■□□□□ 0.11
UBE2L3-201ENST00000342192 ZKSCAN2Q63HK3 967 aa15.76■□□□□ 0.11
UBE2L3-201ENST00000342192 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
UBE2L3-201ENST00000342192 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
UBE2L3-201ENST00000342192 TSR2Q969E8 191 aaKnown RBP15.75■□□□□ 0.11
UBE2L3-201ENST00000342192 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
UBE2L3-201ENST00000342192 IL16Q14005 1332 aa15.74■□□□□ 0.11
UBE2L3-201ENST00000342192 REREQ9P2R6 1566 aa15.74■□□□□ 0.11
UBE2L3-201ENST00000342192 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
UBE2L3-201ENST00000342192 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
UBE2L3-201ENST00000342192 FBXO31Q5XUX0 539 aaPredicted RBP15.74■□□□□ 0.11
UBE2L3-201ENST00000342192 HDGFL2Q7Z4V5 671 aaPredicted RBP15.74■□□□□ 0.11
UBE2L3-201ENST00000342192 DZIP1LQ8IYY4 767 aaKnown RBP15.73■□□□□ 0.11
UBE2L3-201ENST00000342192 EXOSC9Q06265 439 aaKnown RBP15.73■□□□□ 0.11
UBE2L3-201ENST00000342192 FTSJ3Q8IY81 847 aaKnown RBP15.73■□□□□ 0.11
UBE2L3-201ENST00000342192 PDZRN3Q9UPQ7 1066 aa15.73■□□□□ 0.11
UBE2L3-201ENST00000342192 SEC24BO95487 1268 aa15.72■□□□□ 0.11
UBE2L3-201ENST00000342192 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
UBE2L3-201ENST00000342192 SMC4Q9NTJ3 1288 aa15.72■□□□□ 0.11
UBE2L3-201ENST00000342192 SETD1AO15047 1707 aaKnown RBP15.72■□□□□ 0.11
UBE2L3-201ENST00000342192 AGLP35573 1532 aa15.72■□□□□ 0.11
UBE2L3-201ENST00000342192 LRRC7Q96NW7 1537 aa15.71■□□□□ 0.11
UBE2L3-201ENST00000342192 DIAPH1O60610 1272 aaKnown RBP15.71■□□□□ 0.11
UBE2L3-201ENST00000342192 ATP7BP35670 1465 aa15.71■□□□□ 0.11
UBE2L3-201ENST00000342192 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.1
UBE2L3-201ENST00000342192 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.1
UBE2L3-201ENST00000342192 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.1
UBE2L3-201ENST00000342192 SPATA31D1Q6ZQQ2 1576 aa15.7■□□□□ 0.1
UBE2L3-201ENST00000342192 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
UBE2L3-201ENST00000342192 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
UBE2L3-201ENST00000342192 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
UBE2L3-201ENST00000342192 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
UBE2L3-201ENST00000342192 TRIM27P14373 513 aa15.69■□□□□ 0.1
UBE2L3-201ENST00000342192 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
UBE2L3-201ENST00000342192 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
UBE2L3-201ENST00000342192 RIPK4P57078 832 aa15.68■□□□□ 0.1
UBE2L3-201ENST00000342192 GLIPR1L2Q4G1C9 344 aa15.68■□□□□ 0.1
UBE2L3-201ENST00000342192 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
UBE2L3-201ENST00000342192 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
UBE2L3-201ENST00000342192 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
UBE2L3-201ENST00000342192 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
UBE2L3-201ENST00000342192 A0A0U1RQG5 324 aaPredicted RBP15.67■□□□□ 0.1
UBE2L3-201ENST00000342192 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
UBE2L3-201ENST00000342192 HDAC1Q13547 482 aaPredicted RBP15.66■□□□□ 0.1
UBE2L3-201ENST00000342192 FCHSD2O94868 740 aa15.66■□□□□ 0.1
UBE2L3-201ENST00000342192 BECN1Q14457 450 aa15.66■□□□□ 0.1
UBE2L3-201ENST00000342192 GSE1Q14687 1217 aa15.66■□□□□ 0.1
UBE2L3-201ENST00000342192 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
UBE2L3-201ENST00000342192 KIF16BQ96L93 1317 aa15.65■□□□□ 0.1
UBE2L3-201ENST00000342192 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
UBE2L3-201ENST00000342192 TBC1D32Q96NH3 1257 aa15.65■□□□□ 0.1
UBE2L3-201ENST00000342192 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
UBE2L3-201ENST00000342192 NRXN3Q9Y4C0 1643 aa15.64■□□□□ 0.09
UBE2L3-201ENST00000342192 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
UBE2L3-201ENST00000342192 POLKQ9UBT6 870 aa15.64■□□□□ 0.09
UBE2L3-201ENST00000342192 PPIP5K1Q6PFW1 1433 aa15.64■□□□□ 0.09
UBE2L3-201ENST00000342192 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
UBE2L3-201ENST00000342192 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
UBE2L3-201ENST00000342192 TSPOAP1O95153 1857 aa15.63■□□□□ 0.09
UBE2L3-201ENST00000342192 FRAT2O75474 233 aaPredicted RBP15.63■□□□□ 0.09
UBE2L3-201ENST00000342192 ALDH1L2Q3SY69 923 aa15.63■□□□□ 0.09
UBE2L3-201ENST00000342192 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.63■□□□□ 0.09
UBE2L3-201ENST00000342192 MAP2P11137 1827 aaKnown RBP15.62■□□□□ 0.09
UBE2L3-201ENST00000342192 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
UBE2L3-201ENST00000342192 CPSF1Q10570 1443 aaKnown RBP15.62■□□□□ 0.09
UBE2L3-201ENST00000342192 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
UBE2L3-201ENST00000342192 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
UBE2L3-201ENST00000342192 IPO8O15397 1037 aaKnown RBP15.62■□□□□ 0.09
UBE2L3-201ENST00000342192 CDK12Q9NYV4 1490 aaPredicted RBP15.61■□□□□ 0.09
UBE2L3-201ENST00000342192 SMC5Q8IY18 1101 aa15.6■□□□□ 0.09
UBE2L3-201ENST00000342192 ZBTB40Q9NUA8 1239 aa15.6■□□□□ 0.09
UBE2L3-201ENST00000342192 KNDC1Q76NI1 1749 aa15.6■□□□□ 0.09
UBE2L3-201ENST00000342192 ZNF428Q96B54 188 aa15.6■□□□□ 0.09
UBE2L3-201ENST00000342192 BRPF1P55201 1214 aaPredicted RBP15.59■□□□□ 0.09
UBE2L3-201ENST00000342192 NFE2L2Q16236 605 aa15.59■□□□□ 0.09
UBE2L3-201ENST00000342192 MON2Q7Z3U7 1717 aa15.59■□□□□ 0.09
UBE2L3-201ENST00000342192 FBLN1P23142 703 aa15.59■□□□□ 0.09
UBE2L3-201ENST00000342192 AATKQ6ZMQ8 1374 aa15.58■□□□□ 0.08
UBE2L3-201ENST00000342192 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
UBE2L3-201ENST00000342192 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
UBE2L3-201ENST00000342192 PHACTR3Q96KR7 559 aa15.57■□□□□ 0.08
UBE2L3-201ENST00000342192 EMILIN1Q9Y6C2 1016 aa15.57■□□□□ 0.08
UBE2L3-201ENST00000342192 METP08581 1390 aa15.56■□□□□ 0.08
UBE2L3-201ENST00000342192 IL13P35225 146 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms