RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 CT47B1P0C2W7 299 aaPredicted RBP24■■□□□ 1.43
SEMA6C-201ENST00000341697 SLC4A2P04920 1241 aa23.99■■□□□ 1.43
SEMA6C-201ENST00000341697 DRC7Q8IY82 874 aa23.98■■□□□ 1.43
SEMA6C-201ENST00000341697 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
SEMA6C-201ENST00000341697 TRAPPC8Q9Y2L5 1435 aa23.98■■□□□ 1.43
SEMA6C-201ENST00000341697 NEUROD6Q96NK8 337 aa23.98■■□□□ 1.43
SEMA6C-201ENST00000341697 RBM33Q96EV2 1170 aaKnown RBP23.98■■□□□ 1.43
SEMA6C-201ENST00000341697 APPP05067 770 aa23.97■■□□□ 1.43
SEMA6C-201ENST00000341697 PDE3AQ14432 1141 aa23.97■■□□□ 1.43
SEMA6C-201ENST00000341697 SYNE3Q6ZMZ3 975 aa23.96■■□□□ 1.43
SEMA6C-201ENST00000341697 CLSTN1O94985 981 aa23.96■■□□□ 1.43
SEMA6C-201ENST00000341697 NME9Q86XW9 330 aa23.96■■□□□ 1.43
SEMA6C-201ENST00000341697 ABCC2Q92887 1545 aa23.95■■□□□ 1.43
SEMA6C-201ENST00000341697 NFE2L2Q16236 605 aa23.95■■□□□ 1.43
SEMA6C-201ENST00000341697 NOB1Q9ULX3 412 aaKnown RBP23.95■■□□□ 1.43
SEMA6C-201ENST00000341697 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
SEMA6C-201ENST00000341697 C11orf95C9JLR9 678 aaPredicted RBP23.95■■□□□ 1.42
SEMA6C-201ENST00000341697 RNF20Q5VTR2 975 aa23.95■■□□□ 1.42
SEMA6C-201ENST00000341697 INTS3Q68E01 1043 aaKnown RBP23.95■■□□□ 1.42
SEMA6C-201ENST00000341697 GZF1Q9H116 711 aaPredicted RBP23.95■■□□□ 1.42
SEMA6C-201ENST00000341697 FOXO3O43524 673 aa23.94■■□□□ 1.42
SEMA6C-201ENST00000341697 ANO2Q9NQ90 1003 aa23.94■■□□□ 1.42
SEMA6C-201ENST00000341697 FAM184AQ8NB25 1140 aa23.94■■□□□ 1.42
SEMA6C-201ENST00000341697 AKAP17AQ02040 695 aaKnown RBP23.93■■□□□ 1.42
SEMA6C-201ENST00000341697 CCDC184Q52MB2 194 aa23.93■■□□□ 1.42
SEMA6C-201ENST00000341697 H3BQV1 296 aa23.93■■□□□ 1.42
SEMA6C-201ENST00000341697 SURF6O75683 361 aaKnown RBP23.93■■□□□ 1.42
SEMA6C-201ENST00000341697 IFFO2Q5TF58 517 aa23.93■■□□□ 1.42
SEMA6C-201ENST00000341697 DMRT2Q9Y5R5 561 aa23.93■■□□□ 1.42
SEMA6C-201ENST00000341697 CPLX2Q6PUV4 134 aaKnown RBP23.92■■□□□ 1.42
SEMA6C-201ENST00000341697 CLASRPQ8N2M8 674 aaKnown RBP23.92■■□□□ 1.42
SEMA6C-201ENST00000341697 RASSF8Q8NHQ8 419 aa23.92■■□□□ 1.42
SEMA6C-201ENST00000341697 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
SEMA6C-201ENST00000341697 TMPOP42166 694 aaKnown RBP23.92■■□□□ 1.42
SEMA6C-201ENST00000341697 UHRF1BP1LA0JNW5 1464 aa23.91■■□□□ 1.42
SEMA6C-201ENST00000341697 TRIM34Q9BYJ4 488 aa23.91■■□□□ 1.42
SEMA6C-201ENST00000341697 GNAI2P04899 355 aa23.91■■□□□ 1.42
SEMA6C-201ENST00000341697 CCT4P50991 539 aaKnown RBP23.91■■□□□ 1.42
SEMA6C-201ENST00000341697 FBXW7Q969H0 707 aa23.91■■□□□ 1.42
SEMA6C-201ENST00000341697 BCAR3O75815 825 aa23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 FAM177BA6PVY3 158 aa23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 GNAT3A8MTJ3 354 aa23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 TRDNQ13061 729 aa23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 BTBD11A6QL63 1104 aa23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 SF3A1Q15459 793 aaKnown RBP23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 TCOF1Q13428 1488 aaKnown RBP23.9■■□□□ 1.42
SEMA6C-201ENST00000341697 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
SEMA6C-201ENST00000341697 DISP1Q96F81 1524 aa23.88■■□□□ 1.41
SEMA6C-201ENST00000341697 FOXD4L5Q5VV16 416 aaPredicted RBP23.88■■□□□ 1.41
SEMA6C-201ENST00000341697 FOXD4L4Q8WXT5 416 aaPredicted RBP23.88■■□□□ 1.41
SEMA6C-201ENST00000341697 ATP6V1DQ9Y5K8 247 aa23.88■■□□□ 1.41
SEMA6C-201ENST00000341697 SRCIN1Q9C0H9 1055 aa23.87■■□□□ 1.41
SEMA6C-201ENST00000341697 WWC1Q8IX03 1113 aa23.87■■□□□ 1.41
SEMA6C-201ENST00000341697 ZNF428Q96B54 188 aa23.87■■□□□ 1.41
SEMA6C-201ENST00000341697 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
SEMA6C-201ENST00000341697 MARCH6O60337 910 aa23.87■■□□□ 1.41
SEMA6C-201ENST00000341697 ATF7IPQ6VMQ6 1270 aa23.86■■□□□ 1.41
SEMA6C-201ENST00000341697 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
SEMA6C-201ENST00000341697 TPM4P67936 248 aa23.86■■□□□ 1.41
SEMA6C-201ENST00000341697 KLHL34Q8N239 644 aa23.85■■□□□ 1.41
SEMA6C-201ENST00000341697 EMILIN1Q9Y6C2 1016 aa23.85■■□□□ 1.41
SEMA6C-201ENST00000341697 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
SEMA6C-201ENST00000341697 ERC1Q8IUD2 1116 aa23.85■■□□□ 1.41
SEMA6C-201ENST00000341697 MSNP26038 577 aaKnown RBP23.84■■□□□ 1.41
SEMA6C-201ENST00000341697 CDC45O75419 566 aa23.84■■□□□ 1.41
SEMA6C-201ENST00000341697 WASHC4Q2M389 1173 aa23.84■■□□□ 1.41
SEMA6C-201ENST00000341697 GCC1Q96CN9 775 aa23.84■■□□□ 1.41
SEMA6C-201ENST00000341697 NSD2O96028 1365 aa23.84■■□□□ 1.41
SEMA6C-201ENST00000341697 MYL6BP14649 208 aa23.83■■□□□ 1.41
SEMA6C-201ENST00000341697 C1orf115Q9H7X2 142 aa23.83■■□□□ 1.41
SEMA6C-201ENST00000341697 CADPS2Q86UW7 1296 aa23.83■■□□□ 1.41
SEMA6C-201ENST00000341697 CNTROBQ8N137 903 aa23.83■■□□□ 1.4
SEMA6C-201ENST00000341697 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.4
SEMA6C-201ENST00000341697 CPLX1O14810 134 aa23.82■■□□□ 1.4
SEMA6C-201ENST00000341697 AMOTQ4VCS5 1084 aa23.82■■□□□ 1.4
SEMA6C-201ENST00000341697 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
SEMA6C-201ENST00000341697 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
SEMA6C-201ENST00000341697 VPS53Q5VIR6 699 aa23.81■■□□□ 1.4
SEMA6C-201ENST00000341697 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
SEMA6C-201ENST00000341697 CHAF1AQ13111 956 aaPredicted RBP23.81■■□□□ 1.4
SEMA6C-201ENST00000341697 SLFN5Q08AF3 891 aa23.81■■□□□ 1.4
SEMA6C-201ENST00000341697 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
SEMA6C-201ENST00000341697 DISP3Q9P2K9 1392 aa23.8■■□□□ 1.4
SEMA6C-201ENST00000341697 RIMS2Q9UQ26 1411 aa23.8■■□□□ 1.4
SEMA6C-201ENST00000341697 DDX11L8A8MPP1 907 aa23.8■■□□□ 1.4
SEMA6C-201ENST00000341697 GLIPR1L2Q4G1C9 344 aa23.8■■□□□ 1.4
SEMA6C-201ENST00000341697 FSD1Q9BTV5 496 aa23.8■■□□□ 1.4
SEMA6C-201ENST00000341697 ACEP12821 1306 aa23.79■■□□□ 1.4
SEMA6C-201ENST00000341697 RAD21O60216 631 aa23.79■■□□□ 1.4
SEMA6C-201ENST00000341697 PHF14O94880 888 aa23.79■■□□□ 1.4
SEMA6C-201ENST00000341697 MCM10Q7L590 875 aa23.79■■□□□ 1.4
SEMA6C-201ENST00000341697 ERICH2A1L162 156 aa23.79■■□□□ 1.4
SEMA6C-201ENST00000341697 TRIM29Q14134 588 aa23.79■■□□□ 1.4
SEMA6C-201ENST00000341697 CCDC27Q2M243 656 aa23.78■■□□□ 1.4
SEMA6C-201ENST00000341697 MVPQ14764 893 aaKnown RBP23.78■■□□□ 1.4
SEMA6C-201ENST00000341697 MCTP1Q6DN14 999 aa23.78■■□□□ 1.4
SEMA6C-201ENST00000341697 TBC1D2BQ9UPU7 963 aa23.78■■□□□ 1.4
SEMA6C-201ENST00000341697 CNNM1Q9NRU3 951 aa23.78■■□□□ 1.4
SEMA6C-201ENST00000341697 PDZRN3Q9UPQ7 1066 aa23.78■■□□□ 1.4
SEMA6C-201ENST00000341697 ABCC11Q96J66 1382 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms