RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 PANK1Q8TE04 598 aa18.37■□□□□ 0.53
LIPA-202ENST00000336233 IGHDP01880 384 aa18.36■□□□□ 0.53
LIPA-202ENST00000336233 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
LIPA-202ENST00000336233 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
LIPA-202ENST00000336233 KNDC1Q76NI1 1749 aa18.36■□□□□ 0.53
LIPA-202ENST00000336233 IL16Q14005 1332 aa18.36■□□□□ 0.53
LIPA-202ENST00000336233 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
LIPA-202ENST00000336233 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
LIPA-202ENST00000336233 MAPK8IP3Q9UPT6 1336 aa18.35■□□□□ 0.53
LIPA-202ENST00000336233 NBR1Q14596 966 aa18.35■□□□□ 0.53
LIPA-202ENST00000336233 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.53
LIPA-202ENST00000336233 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
LIPA-202ENST00000336233 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
LIPA-202ENST00000336233 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
LIPA-202ENST00000336233 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
LIPA-202ENST00000336233 RGS3P49796 1198 aa18.31■□□□□ 0.52
LIPA-202ENST00000336233 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
LIPA-202ENST00000336233 PLEKHG5O94827 1062 aa18.3■□□□□ 0.52
LIPA-202ENST00000336233 RLBP1P12271 317 aa18.3■□□□□ 0.52
LIPA-202ENST00000336233 DEKP35659 375 aaKnown RBP18.3■□□□□ 0.52
LIPA-202ENST00000336233 PPM1GO15355 546 aaPredicted RBP18.3■□□□□ 0.52
LIPA-202ENST00000336233 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
LIPA-202ENST00000336233 USP35Q9P2H5 1018 aa18.3■□□□□ 0.52
LIPA-202ENST00000336233 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
LIPA-202ENST00000336233 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
LIPA-202ENST00000336233 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
LIPA-202ENST00000336233 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
LIPA-202ENST00000336233 TECPR2O15040 1411 aa18.29■□□□□ 0.52
LIPA-202ENST00000336233 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
LIPA-202ENST00000336233 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
LIPA-202ENST00000336233 CPS1P31327 1500 aa18.28■□□□□ 0.52
LIPA-202ENST00000336233 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
LIPA-202ENST00000336233 MON2Q7Z3U7 1717 aa18.28■□□□□ 0.52
LIPA-202ENST00000336233 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
LIPA-202ENST00000336233 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.52
LIPA-202ENST00000336233 MVPQ14764 893 aaKnown RBP18.27■□□□□ 0.51
LIPA-202ENST00000336233 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.51
LIPA-202ENST00000336233 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.51
LIPA-202ENST00000336233 SIRT1Q96EB6 747 aa18.26■□□□□ 0.51
LIPA-202ENST00000336233 TNNQ9UQP3 1299 aa18.26■□□□□ 0.51
LIPA-202ENST00000336233 PCDHB15Q9Y5E8 787 aa18.26■□□□□ 0.51
LIPA-202ENST00000336233 FCHSD2O94868 740 aa18.25■□□□□ 0.51
LIPA-202ENST00000336233 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
LIPA-202ENST00000336233 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
LIPA-202ENST00000336233 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
LIPA-202ENST00000336233 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
LIPA-202ENST00000336233 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
LIPA-202ENST00000336233 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
LIPA-202ENST00000336233 DZIP1LQ8IYY4 767 aaKnown RBP18.24■□□□□ 0.51
LIPA-202ENST00000336233 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
LIPA-202ENST00000336233 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
LIPA-202ENST00000336233 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
LIPA-202ENST00000336233 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
LIPA-202ENST00000336233 AATKQ6ZMQ8 1374 aa18.23■□□□□ 0.51
LIPA-202ENST00000336233 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
LIPA-202ENST00000336233 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
LIPA-202ENST00000336233 C3P01024 1663 aa18.22■□□□□ 0.51
LIPA-202ENST00000336233 METP08581 1390 aa18.22■□□□□ 0.51
LIPA-202ENST00000336233 WASLO00401 505 aaPredicted RBP18.22■□□□□ 0.51
LIPA-202ENST00000336233 RIPK4P57078 832 aa18.22■□□□□ 0.51
LIPA-202ENST00000336233 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
LIPA-202ENST00000336233 ITSN1Q15811 1721 aa18.21■□□□□ 0.51
LIPA-202ENST00000336233 USP19O94966 1318 aa18.21■□□□□ 0.51
LIPA-202ENST00000336233 UBR1Q8IWV7 1749 aa18.21■□□□□ 0.51
LIPA-202ENST00000336233 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
LIPA-202ENST00000336233 SSH1Q8WYL5 1049 aa18.2■□□□□ 0.5
LIPA-202ENST00000336233 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
LIPA-202ENST00000336233 NEFMP07197 916 aa18.19■□□□□ 0.5
LIPA-202ENST00000336233 TRIM27P14373 513 aa18.19■□□□□ 0.5
LIPA-202ENST00000336233 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
LIPA-202ENST00000336233 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
LIPA-202ENST00000336233 PKNOX2Q96KN3 472 aa18.19■□□□□ 0.5
LIPA-202ENST00000336233 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
LIPA-202ENST00000336233 PDZRN3Q9UPQ7 1066 aa18.19■□□□□ 0.5
LIPA-202ENST00000336233 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
LIPA-202ENST00000336233 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
LIPA-202ENST00000336233 ZNF428Q96B54 188 aa18.18■□□□□ 0.5
LIPA-202ENST00000336233 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
LIPA-202ENST00000336233 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
LIPA-202ENST00000336233 HDAC1Q13547 482 aaPredicted RBP18.18■□□□□ 0.5
LIPA-202ENST00000336233 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
LIPA-202ENST00000336233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
LIPA-202ENST00000336233 TNRQ92752 1358 aa18.17■□□□□ 0.5
LIPA-202ENST00000336233 TOPAZ1Q8N9V7 1692 aa18.17■□□□□ 0.5
LIPA-202ENST00000336233 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
LIPA-202ENST00000336233 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
LIPA-202ENST00000336233 IL13P35225 146 aa18.15■□□□□ 0.5
LIPA-202ENST00000336233 MLECQ14165 292 aa18.15■□□□□ 0.5
LIPA-202ENST00000336233 TMEM2Q9UHN6 1383 aa18.15■□□□□ 0.5
LIPA-202ENST00000336233 CALD1Q05682 793 aaKnown RBP18.14■□□□□ 0.5
LIPA-202ENST00000336233 IPO8O15397 1037 aaKnown RBP18.14■□□□□ 0.49
LIPA-202ENST00000336233 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
LIPA-202ENST00000336233 NOB1Q9ULX3 412 aaKnown RBP18.13■□□□□ 0.49
LIPA-202ENST00000336233 CCDC61Q9Y6R9 512 aa18.13■□□□□ 0.49
LIPA-202ENST00000336233 ADAMTS13Q76LX8 1427 aa18.12■□□□□ 0.49
LIPA-202ENST00000336233 NME9Q86XW9 330 aa18.12■□□□□ 0.49
LIPA-202ENST00000336233 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
LIPA-202ENST00000336233 SEC24BO95487 1268 aa18.11■□□□□ 0.49
LIPA-202ENST00000336233 SLC4A3P48751 1232 aa18.11■□□□□ 0.49
LIPA-202ENST00000336233 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms