RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.04■□□□□ 0.64
HDAC5-202ENST00000336057 RAPGEF3O95398 923 aa19.04■□□□□ 0.64
HDAC5-202ENST00000336057 K7ELQ4 463 aaPredicted RBP19.03■□□□□ 0.64
HDAC5-202ENST00000336057 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
HDAC5-202ENST00000336057 RAPGEF4Q8WZA2 1011 aa19.03■□□□□ 0.64
HDAC5-202ENST00000336057 TMEM57Q8N5G2 664 aa19.03■□□□□ 0.64
HDAC5-202ENST00000336057 CCT4P50991 539 aaKnown RBP19.03■□□□□ 0.64
HDAC5-202ENST00000336057 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
HDAC5-202ENST00000336057 GPATCH8Q9UKJ3 1502 aaKnown RBP19.03■□□□□ 0.64
HDAC5-202ENST00000336057 CPLX1O14810 134 aa19.02■□□□□ 0.64
HDAC5-202ENST00000336057 AIMP1Q12904 312 aaKnown RBP19.02■□□□□ 0.64
HDAC5-202ENST00000336057 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
HDAC5-202ENST00000336057 DISP3Q9P2K9 1392 aa19.02■□□□□ 0.64
HDAC5-202ENST00000336057 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.63
HDAC5-202ENST00000336057 NFE2L2Q16236 605 aa19.01■□□□□ 0.63
HDAC5-202ENST00000336057 SYNE3Q6ZMZ3 975 aa19.01■□□□□ 0.63
HDAC5-202ENST00000336057 CREBRFQ8IUR6 639 aa19.01■□□□□ 0.63
HDAC5-202ENST00000336057 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
HDAC5-202ENST00000336057 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
HDAC5-202ENST00000336057 MCM4P33991 863 aa19.01■□□□□ 0.63
HDAC5-202ENST00000336057 RNF214Q8ND24 703 aa19.01■□□□□ 0.63
HDAC5-202ENST00000336057 CWC22Q9HCG8 908 aaKnown RBP19.01■□□□□ 0.63
HDAC5-202ENST00000336057 SCAF11Q99590 1463 aaKnown RBP19■□□□□ 0.63
HDAC5-202ENST00000336057 ADGRF5Q8IZF2 1346 aa19■□□□□ 0.63
HDAC5-202ENST00000336057 CIZ1Q9ULV3 898 aaPredicted RBP19■□□□□ 0.63
HDAC5-202ENST00000336057 SASS6Q6UVJ0 657 aa18.99■□□□□ 0.63
HDAC5-202ENST00000336057 FAM13BQ9NYF5 915 aa18.99■□□□□ 0.63
HDAC5-202ENST00000336057 PSMA5P28066 241 aa18.99■□□□□ 0.63
HDAC5-202ENST00000336057 AKAP17AQ02040 695 aaKnown RBP18.99■□□□□ 0.63
HDAC5-202ENST00000336057 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
HDAC5-202ENST00000336057 EVA1CP58658 441 aa18.99■□□□□ 0.63
HDAC5-202ENST00000336057 CCDC39Q9UFE4 941 aa18.99■□□□□ 0.63
HDAC5-202ENST00000336057 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
HDAC5-202ENST00000336057 TRDNQ13061 729 aa18.98■□□□□ 0.63
HDAC5-202ENST00000336057 TRIM29Q14134 588 aa18.98■□□□□ 0.63
HDAC5-202ENST00000336057 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
HDAC5-202ENST00000336057 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
HDAC5-202ENST00000336057 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
HDAC5-202ENST00000336057 FSD1Q9BTV5 496 aa18.97■□□□□ 0.63
HDAC5-202ENST00000336057 APPP05067 770 aa18.97■□□□□ 0.63
HDAC5-202ENST00000336057 RPAP2Q8IXW5 612 aaPredicted RBP18.97■□□□□ 0.63
HDAC5-202ENST00000336057 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
HDAC5-202ENST00000336057 NLRP2Q9NX02 1062 aa18.97■□□□□ 0.63
HDAC5-202ENST00000336057 ABCC11Q96J66 1382 aa18.97■□□□□ 0.63
HDAC5-202ENST00000336057 TPM3P06753 285 aa18.96■□□□□ 0.63
HDAC5-202ENST00000336057 CCDC73Q6ZRK6 1079 aa18.96■□□□□ 0.63
HDAC5-202ENST00000336057 ZNF592Q92610 1267 aa18.96■□□□□ 0.63
HDAC5-202ENST00000336057 NEUROD6Q96NK8 337 aa18.96■□□□□ 0.63
HDAC5-202ENST00000336057 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
HDAC5-202ENST00000336057 CCDC173Q0VFZ6 552 aa18.96■□□□□ 0.63
HDAC5-202ENST00000336057 PLEKHO1Q53GL0 409 aaPredicted RBP18.95■□□□□ 0.62
HDAC5-202ENST00000336057 TPD52L1Q16890 204 aaPredicted RBP18.95■□□□□ 0.62
HDAC5-202ENST00000336057 ALDH1L2Q3SY69 923 aa18.95■□□□□ 0.62
HDAC5-202ENST00000336057 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
HDAC5-202ENST00000336057 GRPEL1Q9HAV7 217 aa18.94■□□□□ 0.62
HDAC5-202ENST00000336057 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
HDAC5-202ENST00000336057 LETM1O95202 739 aaPredicted RBP18.94■□□□□ 0.62
HDAC5-202ENST00000336057 ERC1Q8IUD2 1116 aa18.94■□□□□ 0.62
HDAC5-202ENST00000336057 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
HDAC5-202ENST00000336057 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
HDAC5-202ENST00000336057 HIP1O00291 1037 aa18.93■□□□□ 0.62
HDAC5-202ENST00000336057 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
HDAC5-202ENST00000336057 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
HDAC5-202ENST00000336057 TCOF1Q13428 1488 aaKnown RBP18.93■□□□□ 0.62
HDAC5-202ENST00000336057 PDCP20941 246 aa18.93■□□□□ 0.62
HDAC5-202ENST00000336057 TSPY26PQ9H489 355 aa18.93■□□□□ 0.62
HDAC5-202ENST00000336057 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
HDAC5-202ENST00000336057 R3HCC1Q9Y3T6 440 aaKnown RBP18.92■□□□□ 0.62
HDAC5-202ENST00000336057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.92■□□□□ 0.62
HDAC5-202ENST00000336057 ADGRL1O94910 1474 aa18.91■□□□□ 0.62
HDAC5-202ENST00000336057 FOSBP53539 338 aa18.91■□□□□ 0.62
HDAC5-202ENST00000336057 GOLGA6L1Q8N7Z2 621 aa18.91■□□□□ 0.62
HDAC5-202ENST00000336057 NUDT16Q96DE0 195 aaKnown RBP18.91■□□□□ 0.62
HDAC5-202ENST00000336057 RAPGEF6Q8TEU7 1601 aa18.91■□□□□ 0.62
HDAC5-202ENST00000336057 IFT57Q9NWB7 429 aa18.91■□□□□ 0.62
HDAC5-202ENST00000336057 PES1O00541 588 aaKnown RBP18.9■□□□□ 0.62
HDAC5-202ENST00000336057 RALYLQ86SE5 291 aaKnown RBP18.9■□□□□ 0.62
HDAC5-202ENST00000336057 TPM1P09493 284 aa18.9■□□□□ 0.62
HDAC5-202ENST00000336057 CLSTN1O94985 981 aa18.9■□□□□ 0.62
HDAC5-202ENST00000336057 TMX4Q9H1E5 349 aaPredicted RBP18.9■□□□□ 0.62
HDAC5-202ENST00000336057 FIBPO43427 364 aa18.89■□□□□ 0.61
HDAC5-202ENST00000336057 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
HDAC5-202ENST00000336057 WASHC4Q2M389 1173 aa18.89■□□□□ 0.61
HDAC5-202ENST00000336057 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
HDAC5-202ENST00000336057 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
HDAC5-202ENST00000336057 NFXL1Q6ZNB6 911 aa18.89■□□□□ 0.61
HDAC5-202ENST00000336057 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
HDAC5-202ENST00000336057 TSR1Q2NL82 804 aaKnown RBP18.89■□□□□ 0.61
HDAC5-202ENST00000336057 ESCO1Q5FWF5 840 aa18.89■□□□□ 0.61
HDAC5-202ENST00000336057 HOOK1Q9UJC3 728 aaKnown RBP18.89■□□□□ 0.61
HDAC5-202ENST00000336057 TRIM27P14373 513 aa18.88■□□□□ 0.61
HDAC5-202ENST00000336057 WAPLQ7Z5K2 1190 aa18.87■□□□□ 0.61
HDAC5-202ENST00000336057 CCAR2Q8N163 923 aaKnown RBP18.87■□□□□ 0.61
HDAC5-202ENST00000336057 ATF3P18847 181 aa18.87■□□□□ 0.61
HDAC5-202ENST00000336057 CYP46A1Q9Y6A2 500 aa18.87■□□□□ 0.61
HDAC5-202ENST00000336057 NSD2O96028 1365 aa18.87■□□□□ 0.61
HDAC5-202ENST00000336057 NOS1P29475 1434 aa18.87■□□□□ 0.61
HDAC5-202ENST00000336057 IGHDP01880 384 aa18.87■□□□□ 0.61
HDAC5-202ENST00000336057 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
HDAC5-202ENST00000336057 PRAG1Q86YV5 1406 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms