RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 PDZRN3Q9UPQ7 1066 aa19.04■□□□□ 0.64
UBA1-201ENST00000335972 PTPRMP28827 1452 aa19.03■□□□□ 0.64
UBA1-201ENST00000335972 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
UBA1-201ENST00000335972 ITPRIPQ8IWB1 547 aa19.02■□□□□ 0.64
UBA1-201ENST00000335972 ARHGAP31Q2M1Z3 1444 aa19.02■□□□□ 0.64
UBA1-201ENST00000335972 EMILIN1Q9Y6C2 1016 aa19.01■□□□□ 0.63
UBA1-201ENST00000335972 ZKSCAN2Q63HK3 967 aa19.01■□□□□ 0.63
UBA1-201ENST00000335972 PRKAR2BP31323 418 aa19.01■□□□□ 0.63
UBA1-201ENST00000335972 CCDC27Q2M243 656 aa19.01■□□□□ 0.63
UBA1-201ENST00000335972 NME9Q86XW9 330 aa19■□□□□ 0.63
UBA1-201ENST00000335972 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
UBA1-201ENST00000335972 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
UBA1-201ENST00000335972 ATAD2Q6PL18 1390 aa19■□□□□ 0.63
UBA1-201ENST00000335972 CD163L1Q9NR16 1453 aa19■□□□□ 0.63
UBA1-201ENST00000335972 NSD2O96028 1365 aa19■□□□□ 0.63
UBA1-201ENST00000335972 TRIM27P14373 513 aa18.99■□□□□ 0.63
UBA1-201ENST00000335972 TMEM131LA2VDJ0 1609 aa18.99■□□□□ 0.63
UBA1-201ENST00000335972 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
UBA1-201ENST00000335972 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
UBA1-201ENST00000335972 PREX1Q8TCU6 1659 aa18.99■□□□□ 0.63
UBA1-201ENST00000335972 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
UBA1-201ENST00000335972 NFKBIBQ15653 356 aa18.98■□□□□ 0.63
UBA1-201ENST00000335972 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
UBA1-201ENST00000335972 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
UBA1-201ENST00000335972 SOX12O15370 315 aa18.97■□□□□ 0.63
UBA1-201ENST00000335972 USP19O94966 1318 aa18.97■□□□□ 0.63
UBA1-201ENST00000335972 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
UBA1-201ENST00000335972 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
UBA1-201ENST00000335972 TMEM57Q8N5G2 664 aa18.95■□□□□ 0.62
UBA1-201ENST00000335972 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
UBA1-201ENST00000335972 ZFYVE9O95405 1425 aa18.95■□□□□ 0.62
UBA1-201ENST00000335972 SLKQ9H2G2 1235 aaPredicted RBP18.94■□□□□ 0.62
UBA1-201ENST00000335972 RWDD1Q9H446 243 aaPredicted RBP18.94■□□□□ 0.62
UBA1-201ENST00000335972 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
UBA1-201ENST00000335972 USP32Q8NFA0 1604 aa18.94■□□□□ 0.62
UBA1-201ENST00000335972 FRAT2O75474 233 aaPredicted RBP18.93■□□□□ 0.62
UBA1-201ENST00000335972 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
UBA1-201ENST00000335972 RIMS2Q9UQ26 1411 aa18.92■□□□□ 0.62
UBA1-201ENST00000335972 METP08581 1390 aa18.92■□□□□ 0.62
UBA1-201ENST00000335972 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
UBA1-201ENST00000335972 NLRP1Q9C000 1473 aa18.92■□□□□ 0.62
UBA1-201ENST00000335972 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
UBA1-201ENST00000335972 C1orf115Q9H7X2 142 aa18.92■□□□□ 0.62
UBA1-201ENST00000335972 ATF7IPQ6VMQ6 1270 aa18.91■□□□□ 0.62
UBA1-201ENST00000335972 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
UBA1-201ENST00000335972 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
UBA1-201ENST00000335972 ARHGEF40Q8TER5 1519 aa18.9■□□□□ 0.62
UBA1-201ENST00000335972 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
UBA1-201ENST00000335972 WASLO00401 505 aaPredicted RBP18.88■□□□□ 0.61
UBA1-201ENST00000335972 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
UBA1-201ENST00000335972 RTN4Q9NQC3 1192 aaKnown RBP18.88■□□□□ 0.61
UBA1-201ENST00000335972 A2ML1A8K2U0 1454 aa18.88■□□□□ 0.61
UBA1-201ENST00000335972 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
UBA1-201ENST00000335972 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
UBA1-201ENST00000335972 FCHSD2O94868 740 aa18.86■□□□□ 0.61
UBA1-201ENST00000335972 PPIP5K1Q6PFW1 1433 aa18.86■□□□□ 0.61
UBA1-201ENST00000335972 ADGRB2O60241 1585 aa18.86■□□□□ 0.61
UBA1-201ENST00000335972 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
UBA1-201ENST00000335972 CEBPAP49715 358 aaPredicted RBP18.85■□□□□ 0.61
UBA1-201ENST00000335972 LNPKQ9C0E8 428 aa18.85■□□□□ 0.61
UBA1-201ENST00000335972 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
UBA1-201ENST00000335972 AEBP1Q8IUX7 1158 aa18.84■□□□□ 0.61
UBA1-201ENST00000335972 COG3Q96JB2 828 aa18.83■□□□□ 0.61
UBA1-201ENST00000335972 LRRC7Q96NW7 1537 aa18.83■□□□□ 0.6
UBA1-201ENST00000335972 NFE2L2Q16236 605 aa18.83■□□□□ 0.6
UBA1-201ENST00000335972 SLC26A8Q96RN1 970 aa18.83■□□□□ 0.6
UBA1-201ENST00000335972 USP35Q9P2H5 1018 aa18.83■□□□□ 0.6
UBA1-201ENST00000335972 PNPLA6Q8IY17 1366 aa18.83■□□□□ 0.6
UBA1-201ENST00000335972 IL13P35225 146 aa18.82■□□□□ 0.6
UBA1-201ENST00000335972 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
UBA1-201ENST00000335972 UPF2Q9HAU5 1272 aaKnown RBP18.81■□□□□ 0.6
UBA1-201ENST00000335972 MBIPQ9NS73 344 aa18.81■□□□□ 0.6
UBA1-201ENST00000335972 ZMYM3Q14202 1370 aa18.81■□□□□ 0.6
UBA1-201ENST00000335972 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
UBA1-201ENST00000335972 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 DIP2BQ9P265 1576 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
UBA1-201ENST00000335972 ZBTB40Q9NUA8 1239 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
UBA1-201ENST00000335972 VAMP4O75379 141 aa18.79■□□□□ 0.6
UBA1-201ENST00000335972 IPO8O15397 1037 aaKnown RBP18.79■□□□□ 0.6
UBA1-201ENST00000335972 CT47B1P0C2W7 299 aaPredicted RBP18.79■□□□□ 0.6
UBA1-201ENST00000335972 IL16Q14005 1332 aa18.78■□□□□ 0.6
UBA1-201ENST00000335972 MAP2P11137 1827 aaKnown RBP18.78■□□□□ 0.6
UBA1-201ENST00000335972 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 CPS1P31327 1500 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 GSE1Q14687 1217 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 FAM135BQ49AJ0 1406 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 KIF16BQ96L93 1317 aa18.77■□□□□ 0.6
UBA1-201ENST00000335972 AAMPQ13685 434 aa18.76■□□□□ 0.59
UBA1-201ENST00000335972 BECN1Q14457 450 aa18.76■□□□□ 0.59
UBA1-201ENST00000335972 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
UBA1-201ENST00000335972 ARXQ96QS3 562 aa18.76■□□□□ 0.59
UBA1-201ENST00000335972 BRPF3Q9ULD4 1205 aa18.76■□□□□ 0.59
UBA1-201ENST00000335972 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms