RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CDK19Q9BWU1 502 aa29.99■■■□□ 2.39
NDEL1-201ENST00000334527 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
NDEL1-201ENST00000334527 ARHGEF40Q8TER5 1519 aa29.97■■■□□ 2.39
NDEL1-201ENST00000334527 CT47B1P0C2W7 299 aaPredicted RBP29.96■■■□□ 2.39
NDEL1-201ENST00000334527 TRIM35Q9UPQ4 493 aa29.96■■■□□ 2.39
NDEL1-201ENST00000334527 ZKSCAN2Q63HK3 967 aa29.95■■■□□ 2.39
NDEL1-201ENST00000334527 CABP1Q9NZU7 370 aa29.95■■■□□ 2.38
NDEL1-201ENST00000334527 MVPQ14764 893 aaKnown RBP29.94■■■□□ 2.38
NDEL1-201ENST00000334527 KIF20BQ96Q89 1820 aa29.94■■■□□ 2.38
NDEL1-201ENST00000334527 EXOSC9Q06265 439 aaKnown RBP29.93■■■□□ 2.38
NDEL1-201ENST00000334527 FAM69CQ0P6D2 419 aa29.93■■■□□ 2.38
NDEL1-201ENST00000334527 DIAPH1O60610 1272 aaKnown RBP29.93■■■□□ 2.38
NDEL1-201ENST00000334527 FTSJ3Q8IY81 847 aaKnown RBP29.92■■■□□ 2.38
NDEL1-201ENST00000334527 RWDD1Q9H446 243 aaPredicted RBP29.91■■■□□ 2.38
NDEL1-201ENST00000334527 DZIP1LQ8IYY4 767 aaKnown RBP29.91■■■□□ 2.38
NDEL1-201ENST00000334527 SMC4Q9NTJ3 1288 aa29.91■■■□□ 2.38
NDEL1-201ENST00000334527 USP19O94966 1318 aa29.9■■■□□ 2.38
NDEL1-201ENST00000334527 PNPLA6Q8IY17 1366 aa29.89■■■□□ 2.38
NDEL1-201ENST00000334527 RIPK4P57078 832 aa29.89■■■□□ 2.37
NDEL1-201ENST00000334527 PDZRN3Q9UPQ7 1066 aa29.89■■■□□ 2.37
NDEL1-201ENST00000334527 IL16Q14005 1332 aa29.88■■■□□ 2.37
NDEL1-201ENST00000334527 SEC24BO95487 1268 aa29.88■■■□□ 2.37
NDEL1-201ENST00000334527 TSPOAP1O95153 1857 aa29.87■■■□□ 2.37
NDEL1-201ENST00000334527 DIP2BQ9P265 1576 aa29.87■■■□□ 2.37
NDEL1-201ENST00000334527 A2ML1A8K2U0 1454 aa29.87■■■□□ 2.37
NDEL1-201ENST00000334527 REREQ9P2R6 1566 aa29.86■■■□□ 2.37
NDEL1-201ENST00000334527 PNNQ9H307 717 aaKnown RBP29.86■■■□□ 2.37
NDEL1-201ENST00000334527 NFKBIBQ15653 356 aa29.86■■■□□ 2.37
NDEL1-201ENST00000334527 WAPLQ7Z5K2 1190 aa29.86■■■□□ 2.37
NDEL1-201ENST00000334527 AGLP35573 1532 aa29.86■■■□□ 2.37
NDEL1-201ENST00000334527 DLC1Q96QB1 1528 aa29.86■■■□□ 2.37
NDEL1-201ENST00000334527 SSH1Q8WYL5 1049 aa29.85■■■□□ 2.37
NDEL1-201ENST00000334527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.85■■■□□ 2.373e-9■■■■□ 20
NDEL1-201ENST00000334527 PPP6R1Q9UPN7 881 aa29.85■■■□□ 2.37
NDEL1-201ENST00000334527 RIMS2Q9UQ26 1411 aa29.83■■■□□ 2.37
NDEL1-201ENST00000334527 ZMYM3Q14202 1370 aa29.83■■■□□ 2.37
NDEL1-201ENST00000334527 TRIM27P14373 513 aa29.83■■■□□ 2.37
NDEL1-201ENST00000334527 SPATA31D1Q6ZQQ2 1576 aa29.82■■■□□ 2.36
NDEL1-201ENST00000334527 ATP7BP35670 1465 aa29.82■■■□□ 2.36
NDEL1-201ENST00000334527 SETD1AO15047 1707 aaKnown RBP29.81■■■□□ 2.36
NDEL1-201ENST00000334527 CDC42BPGQ6DT37 1551 aa29.81■■■□□ 2.36
NDEL1-201ENST00000334527 LRRC7Q96NW7 1537 aa29.8■■■□□ 2.36
NDEL1-201ENST00000334527 FCHSD2O94868 740 aa29.8■■■□□ 2.36
NDEL1-201ENST00000334527 ATF7IPQ6VMQ6 1270 aa29.79■■■□□ 2.36
NDEL1-201ENST00000334527 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
NDEL1-201ENST00000334527 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
NDEL1-201ENST00000334527 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
NDEL1-201ENST00000334527 ITPRIPQ8IWB1 547 aa29.78■■■□□ 2.36
NDEL1-201ENST00000334527 POLKQ9UBT6 870 aa29.78■■■□□ 2.36
NDEL1-201ENST00000334527 NOB1Q9ULX3 412 aaKnown RBP29.78■■■□□ 2.36
NDEL1-201ENST00000334527 FBLN1P23142 703 aa29.78■■■□□ 2.36
NDEL1-201ENST00000334527 DDX19BQ9UMR2 479 aa29.77■■■□□ 2.36
NDEL1-201ENST00000334527 MLECQ14165 292 aa29.77■■■□□ 2.36
NDEL1-201ENST00000334527 PRKAR2BP31323 418 aa29.76■■■□□ 2.35
NDEL1-201ENST00000334527 RSPH6AQ9H0K4 717 aa29.76■■■□□ 2.35
NDEL1-201ENST00000334527 FAM135BQ49AJ0 1406 aa29.75■■■□□ 2.35
NDEL1-201ENST00000334527 UPF2Q9HAU5 1272 aaKnown RBP29.73■■■□□ 2.35
NDEL1-201ENST00000334527 MAP2P11137 1827 aaKnown RBP29.73■■■□□ 2.35
NDEL1-201ENST00000334527 HDAC1Q13547 482 aaPredicted RBP29.72■■■□□ 2.35
NDEL1-201ENST00000334527 KIF16BQ96L93 1317 aa29.72■■■□□ 2.35
NDEL1-201ENST00000334527 TMEM57Q8N5G2 664 aa29.71■■■□□ 2.35
NDEL1-201ENST00000334527 NRXN3Q9Y4C0 1643 aa29.7■■■□□ 2.34
NDEL1-201ENST00000334527 PPIP5K1Q6PFW1 1433 aa29.7■■■□□ 2.34
NDEL1-201ENST00000334527 IPO8O15397 1037 aaKnown RBP29.7■■■□□ 2.34
NDEL1-201ENST00000334527 BECN1Q14457 450 aa29.7■■■□□ 2.34
NDEL1-201ENST00000334527 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
NDEL1-201ENST00000334527 EDC4Q6P2E9 1401 aaKnown RBP29.69■■■□□ 2.34
NDEL1-201ENST00000334527 CPSF1Q10570 1443 aaKnown RBP29.68■■■□□ 2.34
NDEL1-201ENST00000334527 HMOX1P09601 288 aa29.68■■■□□ 2.34
NDEL1-201ENST00000334527 ALDH1L2Q3SY69 923 aa29.68■■■□□ 2.34
NDEL1-201ENST00000334527 METP08581 1390 aa29.67■■■□□ 2.34
NDEL1-201ENST00000334527 TBC1D32Q96NH3 1257 aa29.67■■■□□ 2.34
NDEL1-201ENST00000334527 EMILIN1Q9Y6C2 1016 aa29.67■■■□□ 2.34
NDEL1-201ENST00000334527 NME9Q86XW9 330 aa29.66■■■□□ 2.34
NDEL1-201ENST00000334527 PHACTR3Q96KR7 559 aa29.66■■■□□ 2.34
NDEL1-201ENST00000334527 FRAT2O75474 233 aaPredicted RBP29.66■■■□□ 2.34
NDEL1-201ENST00000334527 GSE1Q14687 1217 aa29.66■■■□□ 2.34
NDEL1-201ENST00000334527 NFE2L2Q16236 605 aa29.66■■■□□ 2.34
NDEL1-201ENST00000334527 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.65■■■□□ 2.34
NDEL1-201ENST00000334527 ZBTB40Q9NUA8 1239 aa29.65■■■□□ 2.34
NDEL1-201ENST00000334527 TXNDC2Q86VQ3 553 aa29.64■■■□□ 2.34
NDEL1-201ENST00000334527 ZRANB1Q9UGI0 708 aa29.62■■■□□ 2.33
NDEL1-201ENST00000334527 IL13P35225 146 aa29.62■■■□□ 2.33
NDEL1-201ENST00000334527 SMC5Q8IY18 1101 aa29.61■■■□□ 2.33
NDEL1-201ENST00000334527 THUMPD2Q9BTF0 503 aaKnown RBP29.61■■■□□ 2.33
NDEL1-201ENST00000334527 CDK12Q9NYV4 1490 aaPredicted RBP29.61■■■□□ 2.33
NDEL1-201ENST00000334527 ZNF428Q96B54 188 aa29.61■■■□□ 2.33
NDEL1-201ENST00000334527 NUDT16Q96DE0 195 aaKnown RBP29.61■■■□□ 2.33
NDEL1-201ENST00000334527 CALD1Q05682 793 aaKnown RBP29.6■■■□□ 2.33
NDEL1-201ENST00000334527 ESF1Q9H501 851 aaKnown RBP29.59■■■□□ 2.33
NDEL1-201ENST00000334527 NCKAP5LQ9HCH0 1330 aa29.58■■■□□ 2.33
NDEL1-201ENST00000334527 AATKQ6ZMQ8 1374 aa29.58■■■□□ 2.33
NDEL1-201ENST00000334527 BRPF1P55201 1214 aaPredicted RBP29.57■■■□□ 2.32
NDEL1-201ENST00000334527 COG3Q96JB2 828 aa29.57■■■□□ 2.32
NDEL1-201ENST00000334527 KNDC1Q76NI1 1749 aa29.57■■■□□ 2.32
NDEL1-201ENST00000334527 MON2Q7Z3U7 1717 aa29.57■■■□□ 2.32
NDEL1-201ENST00000334527 CPS1P31327 1500 aa29.56■■■□□ 2.32
NDEL1-201ENST00000334527 CCDC61Q9Y6R9 512 aa29.56■■■□□ 2.32
NDEL1-201ENST00000334527 VAMP4O75379 141 aa29.55■■■□□ 2.32
NDEL1-201ENST00000334527 GNAI1P63096 354 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms