RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
SMTN-201ENST00000333137 PKD2Q13563 968 aa16.43■□□□□ 0.22
SMTN-201ENST00000333137 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.43■□□□□ 0.22
SMTN-201ENST00000333137 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
SMTN-201ENST00000333137 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
SMTN-201ENST00000333137 TERF2Q15554 542 aa16.42■□□□□ 0.22
SMTN-201ENST00000333137 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
SMTN-201ENST00000333137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMTN-201ENST00000333137 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
SMTN-201ENST00000333137 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
SMTN-201ENST00000333137 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
SMTN-201ENST00000333137 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
SMTN-201ENST00000333137 PLCD4Q9BRC7 762 aa16.41■□□□□ 0.22
SMTN-201ENST00000333137 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
SMTN-201ENST00000333137 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
SMTN-201ENST00000333137 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
SMTN-201ENST00000333137 PHF14O94880 888 aa16.4■□□□□ 0.22
SMTN-201ENST00000333137 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
SMTN-201ENST00000333137 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
SMTN-201ENST00000333137 TSPOAP1O95153 1857 aa16.4■□□□□ 0.22
SMTN-201ENST00000333137 EGFL6Q8IUX8 553 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 PDLIM2Q96JY6 352 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMTN-201ENST00000333137 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 ARHGEF12Q9NZN5 1544 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
SMTN-201ENST00000333137 NINLQ9Y2I6 1382 aa16.39■□□□□ 0.21
SMTN-201ENST00000333137 GOLIM4O00461 696 aa16.38■□□□□ 0.21
SMTN-201ENST00000333137 CEP83Q9Y592 693 aa16.38■□□□□ 0.21
SMTN-201ENST00000333137 KDM6BO15054 1643 aa16.38■□□□□ 0.21
SMTN-201ENST00000333137 STK26Q9P289 416 aa16.38■□□□□ 0.21
SMTN-201ENST00000333137 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMTN-201ENST00000333137 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
SMTN-201ENST00000333137 NCAPGQ9BPX3 1015 aa16.37■□□□□ 0.21
SMTN-201ENST00000333137 IGHDP01880 384 aa16.37■□□□□ 0.21
SMTN-201ENST00000333137 RASSF4Q9H2L5 321 aa16.37■□□□□ 0.21
SMTN-201ENST00000333137 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
SMTN-201ENST00000333137 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 RIOK3O14730 519 aaKnown RBP16.36■□□□□ 0.21
SMTN-201ENST00000333137 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
SMTN-201ENST00000333137 HNRNPH2P55795 449 aaKnown RBP16.36■□□□□ 0.21
SMTN-201ENST00000333137 RAD51AP2Q09MP3 1159 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 C10orf67Q8IYJ2 551 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 TICAM2Q86XR7 235 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 GYS2P54840 703 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 ZSCAN23Q3MJ62 389 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 DIAPH3Q9NSV4 1193 aa16.36■□□□□ 0.21
SMTN-201ENST00000333137 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
SMTN-201ENST00000333137 CCDC172P0C7W6 258 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 SSFA2P28290 1259 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 MCTP1Q6DN14 999 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 ICE2Q659A1 982 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 DRC1Q96MC2 740 aa16.34■□□□□ 0.21
SMTN-201ENST00000333137 GOLGA6L6A8MZA4 724 aa16.33■□□□□ 0.2
SMTN-201ENST00000333137 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
SMTN-201ENST00000333137 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
SMTN-201ENST00000333137 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
SMTN-201ENST00000333137 TTC12Q9H892 705 aaPredicted RBP16.32■□□□□ 0.2
SMTN-201ENST00000333137 DENND4BO75064 1496 aaPredicted RBP16.32■□□□□ 0.2
SMTN-201ENST00000333137 MBD5Q9P267 1494 aa16.32■□□□□ 0.2
SMTN-201ENST00000333137 ZNF592Q92610 1267 aa16.32■□□□□ 0.2
SMTN-201ENST00000333137 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
SMTN-201ENST00000333137 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
SMTN-201ENST00000333137 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
SMTN-201ENST00000333137 RAB3GAP1Q15042 981 aa16.31■□□□□ 0.2
SMTN-201ENST00000333137 IRF6O14896 467 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 TDO2P48775 406 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 ZNF445P59923 1031 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 ANKRD7Q92527 254 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 NOP2P46087 812 aaKnown RBP16.3■□□□□ 0.2
SMTN-201ENST00000333137 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 DNAJC21Q5F1R6 531 aaKnown RBP16.3■□□□□ 0.2
SMTN-201ENST00000333137 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
SMTN-201ENST00000333137 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 MCCP23508 829 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 PLCB2Q00722 1185 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 SATB1Q01826 763 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 SEMA3FQ13275 785 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
SMTN-201ENST00000333137 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
SMTN-201ENST00000333137 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
SMTN-201ENST00000333137 SYCE3A1L190 88 aa16.29■□□□□ 0.2
SMTN-201ENST00000333137 DDX41Q9UJV9 622 aaKnown RBP16.29■□□□□ 0.2
SMTN-201ENST00000333137 FAM212AQ96EL1 285 aa16.28■□□□□ 0.2
SMTN-201ENST00000333137 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
SMTN-201ENST00000333137 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.2
SMTN-201ENST00000333137 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
SMTN-201ENST00000333137 RNF217Q8TC41 542 aa16.27■□□□□ 0.2
SMTN-201ENST00000333137 ST7Q9NRC1 585 aa16.27■□□□□ 0.2
SMTN-201ENST00000333137 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.19
SMTN-201ENST00000333137 ESF1Q9H501 851 aaKnown RBP16.27■□□□□ 0.19
SMTN-201ENST00000333137 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms