RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 PDZRN3Q9UPQ7 1066 aa22.96■■□□□ 1.27
CLSTN3-202ENST00000331148 RIMS2Q9UQ26 1411 aa22.96■■□□□ 1.27
CLSTN3-202ENST00000331148 AAMPQ13685 434 aa22.96■■□□□ 1.27
CLSTN3-202ENST00000331148 CHMP5Q9NZZ3 219 aa22.96■■□□□ 1.27
CLSTN3-202ENST00000331148 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
CLSTN3-202ENST00000331148 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
CLSTN3-202ENST00000331148 CEBPAP49715 358 aaPredicted RBP22.93■■□□□ 1.26
CLSTN3-202ENST00000331148 ZMYND15Q9H091 742 aa22.93■■□□□ 1.26
CLSTN3-202ENST00000331148 FER1L4A9Z1Z3 1794 aa22.93■■□□□ 1.26
CLSTN3-202ENST00000331148 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
CLSTN3-202ENST00000331148 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
CLSTN3-202ENST00000331148 HDGFP51858 240 aaKnown RBP22.91■■□□□ 1.26
CLSTN3-202ENST00000331148 ALKQ9UM73 1620 aa22.91■■□□□ 1.26
CLSTN3-202ENST00000331148 C3P01024 1663 aa22.9■■□□□ 1.26
CLSTN3-202ENST00000331148 GRPEL1Q9HAV7 217 aa22.9■■□□□ 1.26
CLSTN3-202ENST00000331148 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
CLSTN3-202ENST00000331148 RLBP1P12271 317 aa22.89■■□□□ 1.26
CLSTN3-202ENST00000331148 RARSP54136 660 aaKnown RBP22.89■■□□□ 1.26
CLSTN3-202ENST00000331148 ESPNB1AK53 854 aa22.88■■□□□ 1.25
CLSTN3-202ENST00000331148 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
CLSTN3-202ENST00000331148 STK26Q9P289 416 aa22.88■■□□□ 1.25
CLSTN3-202ENST00000331148 ARHGEF28Q8N1W1 1705 aaKnown RBP22.88■■□□□ 1.25
CLSTN3-202ENST00000331148 DDX11L8A8MPP1 907 aa22.88■■□□□ 1.25
CLSTN3-202ENST00000331148 ISY1Q9ULR0 285 aaKnown RBP22.88■■□□□ 1.25
CLSTN3-202ENST00000331148 C22orf23Q9BZE7 217 aa22.87■■□□□ 1.25
CLSTN3-202ENST00000331148 RWDD1Q9H446 243 aaPredicted RBP22.87■■□□□ 1.25
CLSTN3-202ENST00000331148 TNNQ9UQP3 1299 aa22.87■■□□□ 1.25
CLSTN3-202ENST00000331148 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
CLSTN3-202ENST00000331148 UBR1Q8IWV7 1749 aa22.87■■□□□ 1.25
CLSTN3-202ENST00000331148 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
CLSTN3-202ENST00000331148 TMEM2Q9UHN6 1383 aa22.85■■□□□ 1.25
CLSTN3-202ENST00000331148 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
CLSTN3-202ENST00000331148 ZNF692Q9BU19 519 aaPredicted RBP22.84■■□□□ 1.25
CLSTN3-202ENST00000331148 MFAP1P55081 439 aaKnown RBP22.83■■□□□ 1.24
CLSTN3-202ENST00000331148 POLR3AO14802 1390 aaPredicted RBP22.82■■□□□ 1.24
CLSTN3-202ENST00000331148 EVC2Q86UK5 1308 aa22.81■■□□□ 1.24
CLSTN3-202ENST00000331148 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
CLSTN3-202ENST00000331148 HSCBQ8IWL3 235 aa22.8■■□□□ 1.24
CLSTN3-202ENST00000331148 PTPRMP28827 1452 aa22.8■■□□□ 1.24
CLSTN3-202ENST00000331148 PUS7Q96PZ0 661 aaKnown RBP22.79■■□□□ 1.24
CLSTN3-202ENST00000331148 BCL2L13Q9BXK5 485 aa22.79■■□□□ 1.24
CLSTN3-202ENST00000331148 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
CLSTN3-202ENST00000331148 SAFB2Q14151 953 aaKnown RBP eCLIP22.79■■□□□ 1.24
CLSTN3-202ENST00000331148 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
CLSTN3-202ENST00000331148 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
CLSTN3-202ENST00000331148 DDIT3P35638 169 aa22.78■■□□□ 1.24
CLSTN3-202ENST00000331148 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
CLSTN3-202ENST00000331148 TRIM44Q96DX7 344 aaPredicted RBP22.78■■□□□ 1.24
CLSTN3-202ENST00000331148 CARD14Q9BXL6 1004 aa22.77■■□□□ 1.24
CLSTN3-202ENST00000331148 NEUROD2Q15784 382 aa22.77■■□□□ 1.23
CLSTN3-202ENST00000331148 RRP7AQ9Y3A4 280 aaKnown RBP22.77■■□□□ 1.23
CLSTN3-202ENST00000331148 TPM2P07951 284 aa22.76■■□□□ 1.23
CLSTN3-202ENST00000331148 MVPQ14764 893 aaKnown RBP22.76■■□□□ 1.23
CLSTN3-202ENST00000331148 SHPRHQ149N8 1683 aa22.76■■□□□ 1.23
CLSTN3-202ENST00000331148 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
CLSTN3-202ENST00000331148 RUNDC1Q96C34 613 aa22.75■■□□□ 1.23
CLSTN3-202ENST00000331148 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
CLSTN3-202ENST00000331148 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
CLSTN3-202ENST00000331148 GAS2L3Q86XJ1 694 aa22.74■■□□□ 1.23
CLSTN3-202ENST00000331148 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
CLSTN3-202ENST00000331148 ABCC11Q96J66 1382 aa22.74■■□□□ 1.23
CLSTN3-202ENST00000331148 LTKP29376 864 aa22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 TXNDC2Q86VQ3 553 aa22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 THEMISQ8N1K5 641 aaPredicted RBP22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 DLC1Q96QB1 1528 aa22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 RIMS1Q86UR5 1692 aaKnown RBP22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 METP08581 1390 aa22.73■■□□□ 1.23
CLSTN3-202ENST00000331148 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
CLSTN3-202ENST00000331148 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
CLSTN3-202ENST00000331148 MINK1Q8N4C8 1332 aaPredicted RBP22.71■■□□□ 1.23
CLSTN3-202ENST00000331148 TNPO1Q92973 898 aaKnown RBP22.71■■□□□ 1.23
CLSTN3-202ENST00000331148 PLEKHG1Q9ULL1 1385 aa22.7■■□□□ 1.23
CLSTN3-202ENST00000331148 CABP2Q9NPB3 220 aa22.7■■□□□ 1.22
CLSTN3-202ENST00000331148 SLIT1O75093 1534 aa22.7■■□□□ 1.22
CLSTN3-202ENST00000331148 SNX21Q969T3 373 aa22.69■■□□□ 1.22
CLSTN3-202ENST00000331148 CIZ1Q9ULV3 898 aaPredicted RBP22.69■■□□□ 1.22
CLSTN3-202ENST00000331148 ARHGAP23Q9P227 1491 aa22.69■■□□□ 1.22
CLSTN3-202ENST00000331148 SMC5Q8IY18 1101 aa22.69■■□□□ 1.22
CLSTN3-202ENST00000331148 GBP4Q96PP9 640 aa22.69■■□□□ 1.22
CLSTN3-202ENST00000331148 SRPK2P78362 688 aaKnown RBP22.68■■□□□ 1.22
CLSTN3-202ENST00000331148 WAPLQ7Z5K2 1190 aa22.68■■□□□ 1.22
CLSTN3-202ENST00000331148 RBM25P49756 843 aaKnown RBP22.68■■□□□ 1.22
CLSTN3-202ENST00000331148 HDAC1Q13547 482 aaPredicted RBP22.68■■□□□ 1.22
CLSTN3-202ENST00000331148 ZKSCAN2Q63HK3 967 aa22.68■■□□□ 1.22
CLSTN3-202ENST00000331148 FTSJ3Q8IY81 847 aaKnown RBP22.68■■□□□ 1.22
CLSTN3-202ENST00000331148 SKOR2Q2VWA4 1001 aaPredicted RBP22.67■■□□□ 1.22
CLSTN3-202ENST00000331148 DZIP1LQ8IYY4 767 aaKnown RBP22.67■■□□□ 1.22
CLSTN3-202ENST00000331148 ADAMTS13Q76LX8 1427 aa22.67■■□□□ 1.22
CLSTN3-202ENST00000331148 CCDC27Q2M243 656 aa22.66■■□□□ 1.22
CLSTN3-202ENST00000331148 KNDC1Q76NI1 1749 aa22.66■■□□□ 1.22
CLSTN3-202ENST00000331148 RAB3GAP1Q15042 981 aa22.66■■□□□ 1.22
CLSTN3-202ENST00000331148 SIRT1Q96EB6 747 aa22.66■■□□□ 1.22
CLSTN3-202ENST00000331148 PDCL3Q9H2J4 239 aa22.65■■□□□ 1.22
CLSTN3-202ENST00000331148 PTMSP20962 102 aa22.65■■□□□ 1.22
CLSTN3-202ENST00000331148 ATAD2Q6PL18 1390 aa22.63■■□□□ 1.21
CLSTN3-202ENST00000331148 HSP90AB1P08238 724 aaKnown RBP22.63■■□□□ 1.21
CLSTN3-202ENST00000331148 CCDC173Q0VFZ6 552 aa22.63■■□□□ 1.21
CLSTN3-202ENST00000331148 KIAA1211Q6ZU35 1233 aa22.63■■□□□ 1.21
CLSTN3-202ENST00000331148 CDK19Q9BWU1 502 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms