RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
RARB-201ENST00000330688 EXOSC9Q06265 439 aaKnown RBP12.89□□□□□ -0.35
RARB-201ENST00000330688 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
RARB-201ENST00000330688 MED14O60244 1454 aa12.88□□□□□ -0.35
RARB-201ENST00000330688 USP19O94966 1318 aa12.88□□□□□ -0.35
RARB-201ENST00000330688 SEC24BO95487 1268 aa12.88□□□□□ -0.35
RARB-201ENST00000330688 WAPLQ7Z5K2 1190 aa12.88□□□□□ -0.35
RARB-201ENST00000330688 CLTCQ00610 1675 aaKnown RBP12.87□□□□□ -0.35
RARB-201ENST00000330688 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
RARB-201ENST00000330688 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
RARB-201ENST00000330688 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
RARB-201ENST00000330688 PNPLA6Q8IY17 1366 aa12.87□□□□□ -0.35
RARB-201ENST00000330688 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
RARB-201ENST00000330688 FBLN1P23142 703 aa12.87□□□□□ -0.35
RARB-201ENST00000330688 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
RARB-201ENST00000330688 RIPK4P57078 832 aa12.86□□□□□ -0.35
RARB-201ENST00000330688 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
RARB-201ENST00000330688 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
RARB-201ENST00000330688 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
RARB-201ENST00000330688 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
RARB-201ENST00000330688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
RARB-201ENST00000330688 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
RARB-201ENST00000330688 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
RARB-201ENST00000330688 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
RARB-201ENST00000330688 TRIM27P14373 513 aa12.84□□□□□ -0.35
RARB-201ENST00000330688 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
RARB-201ENST00000330688 IL16Q14005 1332 aa12.84□□□□□ -0.35
RARB-201ENST00000330688 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
RARB-201ENST00000330688 MLECQ14165 292 aa12.83□□□□□ -0.36
RARB-201ENST00000330688 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
RARB-201ENST00000330688 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
RARB-201ENST00000330688 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
RARB-201ENST00000330688 FCHSD2O94868 740 aa12.82□□□□□ -0.36
RARB-201ENST00000330688 AGLP35573 1532 aa12.82□□□□□ -0.36
RARB-201ENST00000330688 ATF7IPQ6VMQ6 1270 aa12.82□□□□□ -0.36
RARB-201ENST00000330688 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
RARB-201ENST00000330688 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
RARB-201ENST00000330688 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
RARB-201ENST00000330688 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
RARB-201ENST00000330688 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
RARB-201ENST00000330688 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
RARB-201ENST00000330688 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
RARB-201ENST00000330688 SPATA31D1Q6ZQQ2 1576 aa12.8□□□□□ -0.36
RARB-201ENST00000330688 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
RARB-201ENST00000330688 ATP7BP35670 1465 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 PHACTR3Q96KR7 559 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 TSPOAP1O95153 1857 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
RARB-201ENST00000330688 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
RARB-201ENST00000330688 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
RARB-201ENST00000330688 METP08581 1390 aa12.78□□□□□ -0.36
RARB-201ENST00000330688 HMOX1P09601 288 aa12.78□□□□□ -0.36
RARB-201ENST00000330688 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
RARB-201ENST00000330688 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
RARB-201ENST00000330688 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
RARB-201ENST00000330688 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
RARB-201ENST00000330688 HDAC1Q13547 482 aaPredicted RBP12.77□□□□□ -0.36
RARB-201ENST00000330688 NME9Q86XW9 330 aa12.77□□□□□ -0.36
RARB-201ENST00000330688 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.36
RARB-201ENST00000330688 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.36
RARB-201ENST00000330688 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.36
RARB-201ENST00000330688 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.36
RARB-201ENST00000330688 SETD1AO15047 1707 aaKnown RBP12.77□□□□□ -0.37
RARB-201ENST00000330688 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
RARB-201ENST00000330688 ZBTB40Q9NUA8 1239 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 RIMBP3CA6NJZ7 1639 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 RIMBP3BA6NNM3 1639 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 RIMBP3Q9UFD9 1639 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 IL13P35225 146 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
RARB-201ENST00000330688 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
RARB-201ENST00000330688 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
RARB-201ENST00000330688 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
RARB-201ENST00000330688 IPO8O15397 1037 aaKnown RBP12.75□□□□□ -0.37
RARB-201ENST00000330688 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
RARB-201ENST00000330688 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
RARB-201ENST00000330688 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
RARB-201ENST00000330688 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
RARB-201ENST00000330688 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
RARB-201ENST00000330688 VAMP4O75379 141 aa12.73□□□□□ -0.37
RARB-201ENST00000330688 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
RARB-201ENST00000330688 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
RARB-201ENST00000330688 GSE1Q14687 1217 aa12.73□□□□□ -0.37
RARB-201ENST00000330688 TSPYL6Q8N831 410 aa12.73□□□□□ -0.37
RARB-201ENST00000330688 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
RARB-201ENST00000330688 BECN1Q14457 450 aa12.73□□□□□ -0.37
RARB-201ENST00000330688 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
RARB-201ENST00000330688 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
RARB-201ENST00000330688 CPS1P31327 1500 aa12.72□□□□□ -0.37
RARB-201ENST00000330688 AATKQ6ZMQ8 1374 aa12.72□□□□□ -0.37
RARB-201ENST00000330688 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
RARB-201ENST00000330688 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
RARB-201ENST00000330688 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
RARB-201ENST00000330688 COG3Q96JB2 828 aa12.71□□□□□ -0.37
RARB-201ENST00000330688 MRPL50Q8N5N7 158 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms