RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
DNMT3B-202ENST00000328111 TRAK2O60296 914 aa16.87■□□□□ 0.29
DNMT3B-202ENST00000328111 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
DNMT3B-202ENST00000328111 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 TRIM27P14373 513 aa16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 IFIT2P09913 472 aaKnown RBP16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
DNMT3B-202ENST00000328111 NUP160Q12769 1436 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 GNAI3P08754 354 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 ARHGEF12Q9NZN5 1544 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 NUCB2P80303 420 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
DNMT3B-202ENST00000328111 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
DNMT3B-202ENST00000328111 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
DNMT3B-202ENST00000328111 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
DNMT3B-202ENST00000328111 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
DNMT3B-202ENST00000328111 RUFY2Q8WXA3 655 aa16.83■□□□□ 0.29
DNMT3B-202ENST00000328111 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.28
DNMT3B-202ENST00000328111 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
DNMT3B-202ENST00000328111 MCM10Q7L590 875 aa16.83■□□□□ 0.28
DNMT3B-202ENST00000328111 SPINK5Q9NQ38 1064 aaPredicted RBP16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 NEK4P51957 841 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 A2MP01023 1474 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 GNAI2P04899 355 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 ESCO1Q5FWF5 840 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
DNMT3B-202ENST00000328111 GOLGA6L6A8MZA4 724 aa16.81■□□□□ 0.28
DNMT3B-202ENST00000328111 KDM6BO15054 1643 aa16.81■□□□□ 0.28
DNMT3B-202ENST00000328111 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
DNMT3B-202ENST00000328111 FYB1O15117 783 aa16.81■□□□□ 0.28
DNMT3B-202ENST00000328111 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
DNMT3B-202ENST00000328111 NRDCO43847 1150 aa16.8■□□□□ 0.28
DNMT3B-202ENST00000328111 ARID3AQ99856 593 aa16.8■□□□□ 0.28
DNMT3B-202ENST00000328111 PHF14O94880 888 aa16.8■□□□□ 0.28
DNMT3B-202ENST00000328111 CSPP1Q1MSJ5 1256 aa16.8■□□□□ 0.28
DNMT3B-202ENST00000328111 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
DNMT3B-202ENST00000328111 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 ATP6V1DQ9Y5K8 247 aa16.79■□□□□ 0.28
DNMT3B-202ENST00000328111 RABEP1Q15276 862 aa16.78■□□□□ 0.28
DNMT3B-202ENST00000328111 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
DNMT3B-202ENST00000328111 DENND4BO75064 1496 aaPredicted RBP16.78■□□□□ 0.28
DNMT3B-202ENST00000328111 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
DNMT3B-202ENST00000328111 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
DNMT3B-202ENST00000328111 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
DNMT3B-202ENST00000328111 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.27
DNMT3B-202ENST00000328111 IFT57Q9NWB7 429 aa16.77■□□□□ 0.27
DNMT3B-202ENST00000328111 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
DNMT3B-202ENST00000328111 MCM4P33991 863 aa16.76■□□□□ 0.27
DNMT3B-202ENST00000328111 MRE11P49959 708 aa16.76■□□□□ 0.27
DNMT3B-202ENST00000328111 ERC2O15083 957 aa16.76■□□□□ 0.27
DNMT3B-202ENST00000328111 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
DNMT3B-202ENST00000328111 FAM83GA6ND36 823 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 NSD2O96028 1365 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 H3BQV1 296 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 RLBP1P12271 317 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 IFFO2Q5TF58 517 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 EXOC6BQ9Y2D4 811 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 FAM184AQ8NB25 1140 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
DNMT3B-202ENST00000328111 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
DNMT3B-202ENST00000328111 LRRCC1Q9C099 1032 aa16.74■□□□□ 0.27
DNMT3B-202ENST00000328111 POLR3AO14802 1390 aaPredicted RBP16.74■□□□□ 0.27
DNMT3B-202ENST00000328111 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
DNMT3B-202ENST00000328111 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
DNMT3B-202ENST00000328111 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
DNMT3B-202ENST00000328111 ZNF530Q6P9A1 599 aaPredicted RBP16.73■□□□□ 0.27
DNMT3B-202ENST00000328111 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
DNMT3B-202ENST00000328111 PLEKHO1Q53GL0 409 aaPredicted RBP16.73■□□□□ 0.27
DNMT3B-202ENST00000328111 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
DNMT3B-202ENST00000328111 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
DNMT3B-202ENST00000328111 SMARCA5O60264 1052 aaPredicted RBP16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 EVA1CP58658 441 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 SRCIN1Q9C0H9 1055 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 WDR7Q9Y4E6 1490 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 F6X3S4 739 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
DNMT3B-202ENST00000328111 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms