RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 SIGLEC1Q9BZZ2 1709 aa13.63□□□□□ -0.23
CUL4A-201ENST00000326335 DEKP35659 375 aaKnown RBP13.62□□□□□ -0.23
CUL4A-201ENST00000326335 MCM10Q7L590 875 aa13.62□□□□□ -0.23
CUL4A-201ENST00000326335 RIMS2Q9UQ26 1411 aa13.62□□□□□ -0.23
CUL4A-201ENST00000326335 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
CUL4A-201ENST00000326335 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
CUL4A-201ENST00000326335 DZIP1LQ8IYY4 767 aaKnown RBP13.62□□□□□ -0.23
CUL4A-201ENST00000326335 NEO1Q92859 1461 aa13.61□□□□□ -0.23
CUL4A-201ENST00000326335 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
CUL4A-201ENST00000326335 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
CUL4A-201ENST00000326335 TULP4Q9NRJ4 1543 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 GLI2P10070 1586 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 MYOM1P52179 1685 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 QRICH2Q9H0J4 1663 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 TRIM27P14373 513 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 PDZRN3Q9UPQ7 1066 aa13.6□□□□□ -0.23
CUL4A-201ENST00000326335 MYO5BQ9ULV0 1848 aa13.59□□□□□ -0.23
CUL4A-201ENST00000326335 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
CUL4A-201ENST00000326335 MFAP1P55081 439 aaKnown RBP13.59□□□□□ -0.23
CUL4A-201ENST00000326335 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
CUL4A-201ENST00000326335 FOXO3O43524 673 aa13.59□□□□□ -0.23
CUL4A-201ENST00000326335 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
CUL4A-201ENST00000326335 ADGRB1O14514 1584 aa13.58□□□□□ -0.24
CUL4A-201ENST00000326335 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
CUL4A-201ENST00000326335 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
CUL4A-201ENST00000326335 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
CUL4A-201ENST00000326335 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
CUL4A-201ENST00000326335 AMOTL2Q9Y2J4 779 aa13.58□□□□□ -0.24
CUL4A-201ENST00000326335 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
CUL4A-201ENST00000326335 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
CUL4A-201ENST00000326335 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
CUL4A-201ENST00000326335 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
CUL4A-201ENST00000326335 LAMC1P11047 1609 aa13.57□□□□□ -0.24
CUL4A-201ENST00000326335 ACEP12821 1306 aa13.57□□□□□ -0.24
CUL4A-201ENST00000326335 AMPHP49418 695 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 RIMBP3CA6NJZ7 1639 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 RIMBP3BA6NNM3 1639 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 RIMBP3Q9UFD9 1639 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 NEXMIFQ5QGS0 1516 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 WDR63Q8IWG1 891 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 NPC1L1Q9UHC9 1359 aa13.56□□□□□ -0.24
CUL4A-201ENST00000326335 NLRP6P59044 892 aa13.55□□□□□ -0.24
CUL4A-201ENST00000326335 PIK3C2BO00750 1634 aa13.55□□□□□ -0.24
CUL4A-201ENST00000326335 INSRP06213 1382 aa13.55□□□□□ -0.24
CUL4A-201ENST00000326335 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
CUL4A-201ENST00000326335 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
CUL4A-201ENST00000326335 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
CUL4A-201ENST00000326335 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
CUL4A-201ENST00000326335 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
CUL4A-201ENST00000326335 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
CUL4A-201ENST00000326335 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
CUL4A-201ENST00000326335 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
CUL4A-201ENST00000326335 MS4A1P11836 297 aa13.53□□□□□ -0.24
CUL4A-201ENST00000326335 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
CUL4A-201ENST00000326335 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
CUL4A-201ENST00000326335 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
CUL4A-201ENST00000326335 MBIPQ9NS73 344 aa13.52□□□□□ -0.24
CUL4A-201ENST00000326335 PPLO60437 1756 aa13.52□□□□□ -0.24
CUL4A-201ENST00000326335 TNRQ92752 1358 aa13.52□□□□□ -0.24
CUL4A-201ENST00000326335 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
CUL4A-201ENST00000326335 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.25
CUL4A-201ENST00000326335 LMTK2Q8IWU2 1503 aa13.52□□□□□ -0.25
CUL4A-201ENST00000326335 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
CUL4A-201ENST00000326335 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
CUL4A-201ENST00000326335 TWISTNBQ3B726 338 aaPredicted RBP13.51□□□□□ -0.25
CUL4A-201ENST00000326335 PTPRMP28827 1452 aa13.5□□□□□ -0.25
CUL4A-201ENST00000326335 KCNA6P17658 529 aa13.5□□□□□ -0.25
CUL4A-201ENST00000326335 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
CUL4A-201ENST00000326335 CLTCQ00610 1675 aaKnown RBP13.5□□□□□ -0.25
CUL4A-201ENST00000326335 FCHSD2O94868 740 aa13.5□□□□□ -0.25
CUL4A-201ENST00000326335 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
CUL4A-201ENST00000326335 NFE2L2Q16236 605 aa13.5□□□□□ -0.25
CUL4A-201ENST00000326335 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
CUL4A-201ENST00000326335 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
CUL4A-201ENST00000326335 F6X3S4 739 aa13.49□□□□□ -0.25
CUL4A-201ENST00000326335 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
CUL4A-201ENST00000326335 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
CUL4A-201ENST00000326335 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
CUL4A-201ENST00000326335 SETD1BQ9UPS6 1966 aaKnown RBP13.48□□□□□ -0.25
CUL4A-201ENST00000326335 RICTORQ6R327 1708 aa13.48□□□□□ -0.25
CUL4A-201ENST00000326335 IL13P35225 146 aa13.47□□□□□ -0.25
CUL4A-201ENST00000326335 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
CUL4A-201ENST00000326335 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
CUL4A-201ENST00000326335 FRAT2O75474 233 aaPredicted RBP13.47□□□□□ -0.25
CUL4A-201ENST00000326335 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
CUL4A-201ENST00000326335 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
CUL4A-201ENST00000326335 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.25
CUL4A-201ENST00000326335 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.26
CUL4A-201ENST00000326335 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.26
CUL4A-201ENST00000326335 DDX19BQ9UMR2 479 aa13.46□□□□□ -0.26
CUL4A-201ENST00000326335 PREX1Q8TCU6 1659 aa13.45□□□□□ -0.26
CUL4A-201ENST00000326335 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
CUL4A-201ENST00000326335 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
CUL4A-201ENST00000326335 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
CUL4A-201ENST00000326335 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
CUL4A-201ENST00000326335 CD163L1Q9NR16 1453 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms