RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 MON2Q7Z3U7 1717 aa27.74■■■□□ 2.03
LIMS2-201ENST00000324938 MYH16Q9H6N6 1097 aa27.74■■■□□ 2.03
LIMS2-201ENST00000324938 MAP2P11137 1827 aaKnown RBP27.74■■■□□ 2.03
LIMS2-201ENST00000324938 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
LIMS2-201ENST00000324938 U2SURPO15042 1029 aaKnown RBP27.73■■■□□ 2.03
LIMS2-201ENST00000324938 HDGFP51858 240 aaKnown RBP27.73■■■□□ 2.03
LIMS2-201ENST00000324938 SKAP1Q86WV1 359 aa27.73■■■□□ 2.03
LIMS2-201ENST00000324938 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
LIMS2-201ENST00000324938 SIRT1Q96EB6 747 aa27.71■■■□□ 2.03
LIMS2-201ENST00000324938 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
LIMS2-201ENST00000324938 CANXP27824 592 aaKnown RBP27.71■■■□□ 2.03
LIMS2-201ENST00000324938 EDC4Q6P2E9 1401 aaKnown RBP27.71■■■□□ 2.03
LIMS2-201ENST00000324938 PPIP5K1Q6PFW1 1433 aa27.71■■■□□ 2.03
LIMS2-201ENST00000324938 ITSN1Q15811 1721 aa27.7■■■□□ 2.03
LIMS2-201ENST00000324938 DIAPH1O60610 1272 aaKnown RBP27.7■■■□□ 2.02
LIMS2-201ENST00000324938 TMEM2Q9UHN6 1383 aa27.7■■■□□ 2.02
LIMS2-201ENST00000324938 MAPK8IP3Q9UPT6 1336 aa27.69■■■□□ 2.02
LIMS2-201ENST00000324938 TMPOP42166 694 aaKnown RBP27.69■■■□□ 2.02
LIMS2-201ENST00000324938 LRRC7Q96NW7 1537 aa27.68■■■□□ 2.02
LIMS2-201ENST00000324938 PANK1Q8TE04 598 aa27.66■■■□□ 2.02
LIMS2-201ENST00000324938 TXNDC2Q86VQ3 553 aa27.65■■■□□ 2.02
LIMS2-201ENST00000324938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
LIMS2-201ENST00000324938 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
LIMS2-201ENST00000324938 CT47B1P0C2W7 299 aaPredicted RBP27.65■■■□□ 2.02
LIMS2-201ENST00000324938 TRIM35Q9UPQ4 493 aa27.65■■■□□ 2.02
LIMS2-201ENST00000324938 C3P01024 1663 aa27.65■■■□□ 2.02
LIMS2-201ENST00000324938 PAK3O75914 559 aaPredicted RBP27.64■■■□□ 2.02
LIMS2-201ENST00000324938 CLUAP1Q96AJ1 413 aa27.64■■■□□ 2.02
LIMS2-201ENST00000324938 FRAT1Q92837 279 aaPredicted RBP27.64■■■□□ 2.01
LIMS2-201ENST00000324938 COG6Q9Y2V7 657 aa27.64■■■□□ 2.01
LIMS2-201ENST00000324938 IL16Q14005 1332 aa27.63■■■□□ 2.01
LIMS2-201ENST00000324938 AAMPQ13685 434 aa27.63■■■□□ 2.01
LIMS2-201ENST00000324938 ADAMTS13Q76LX8 1427 aa27.63■■■□□ 2.01
LIMS2-201ENST00000324938 POLKQ9UBT6 870 aa27.62■■■□□ 2.01
LIMS2-201ENST00000324938 VIRMAQ69YN4 1812 aaKnown RBP27.62■■■□□ 2.01
LIMS2-201ENST00000324938 CDK12Q9NYV4 1490 aaPredicted RBP27.6■■■□□ 2.01
LIMS2-201ENST00000324938 NPM2Q86SE8 214 aaKnown RBP27.6■■■□□ 2.01
LIMS2-201ENST00000324938 NUDT16Q96DE0 195 aaKnown RBP27.6■■■□□ 2.01
LIMS2-201ENST00000324938 ZBTB47Q9UFB7 747 aaPredicted RBP27.6■■■□□ 2.01
LIMS2-201ENST00000324938 TOPAZ1Q8N9V7 1692 aa27.59■■■□□ 2.01
LIMS2-201ENST00000324938 FCHSD2O94868 740 aa27.59■■■□□ 2.01
LIMS2-201ENST00000324938 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
LIMS2-201ENST00000324938 CCDC61Q9Y6R9 512 aa27.58■■■□□ 2.01
LIMS2-201ENST00000324938 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.58■■■□□ 2
LIMS2-201ENST00000324938 AATKQ6ZMQ8 1374 aa27.57■■■□□ 2
LIMS2-201ENST00000324938 IGHDP01880 384 aa27.57■■■□□ 2
LIMS2-201ENST00000324938 TSR2Q969E8 191 aaKnown RBP27.57■■■□□ 2
LIMS2-201ENST00000324938 BCL2L13Q9BXK5 485 aa27.57■■■□□ 2
LIMS2-201ENST00000324938 RLBP1P12271 317 aa27.56■■■□□ 2
LIMS2-201ENST00000324938 RIPK4P57078 832 aa27.56■■■□□ 2
LIMS2-201ENST00000324938 ROBO2Q9HCK4 1378 aa27.56■■■□□ 2
LIMS2-201ENST00000324938 NRKQ7Z2Y5 1582 aa27.55■■■□□ 2
LIMS2-201ENST00000324938 RSPH6AQ9H0K4 717 aa27.55■■■□□ 2
LIMS2-201ENST00000324938 FAM161AQ3B820 660 aa27.55■■■□□ 2
LIMS2-201ENST00000324938 NME9Q86XW9 330 aa27.55■■■□□ 2
LIMS2-201ENST00000324938 EXOSC9Q06265 439 aaKnown RBP27.53■■■□□ 2
LIMS2-201ENST00000324938 TNNQ9UQP3 1299 aa27.53■■■□□ 2
LIMS2-201ENST00000324938 FBLN1P23142 703 aa27.53■■■□□ 2
LIMS2-201ENST00000324938 PRR36Q9H6K5 1346 aa27.52■■■□□ 2
LIMS2-201ENST00000324938 PPM1GO15355 546 aaPredicted RBP27.52■■■□□ 2
LIMS2-201ENST00000324938 C8orf34Q49A92 452 aa27.52■■■□□ 2
LIMS2-201ENST00000324938 RGS3P49796 1198 aa27.51■■□□□ 1.99
LIMS2-201ENST00000324938 FER1L4A9Z1Z3 1794 aa27.51■■□□□ 1.99
LIMS2-201ENST00000324938 NCKAP5LQ9HCH0 1330 aa27.51■■□□□ 1.99
LIMS2-201ENST00000324938 PRKAR2BP31323 418 aa27.5■■□□□ 1.99
LIMS2-201ENST00000324938 ZKSCAN2Q63HK3 967 aa27.5■■□□□ 1.99
LIMS2-201ENST00000324938 PMFBP1Q8TBY8 1022 aa27.5■■□□□ 1.99
LIMS2-201ENST00000324938 EMILIN1Q9Y6C2 1016 aa27.5■■□□□ 1.99
LIMS2-201ENST00000324938 SLIT1O75093 1534 aa27.49■■□□□ 1.99
LIMS2-201ENST00000324938 LTKP29376 864 aa27.49■■□□□ 1.99
LIMS2-201ENST00000324938 COG3Q96JB2 828 aa27.49■■□□□ 1.99
LIMS2-201ENST00000324938 ZNF692Q9BU19 519 aaPredicted RBP27.49■■□□□ 1.99
LIMS2-201ENST00000324938 DLG5Q8TDM6 1919 aa27.48■■□□□ 1.99
LIMS2-201ENST00000324938 NEFMP07197 916 aa27.47■■□□□ 1.99
LIMS2-201ENST00000324938 IL13P35225 146 aa27.47■■□□□ 1.99
LIMS2-201ENST00000324938 ZRANB1Q9UGI0 708 aa27.47■■□□□ 1.99
LIMS2-201ENST00000324938 ARHGAP23Q9P227 1491 aa27.47■■□□□ 1.99
LIMS2-201ENST00000324938 MVPQ14764 893 aaKnown RBP27.47■■□□□ 1.99
LIMS2-201ENST00000324938 SMC4Q9NTJ3 1288 aa27.47■■□□□ 1.99
LIMS2-201ENST00000324938 NALCNQ8IZF0 1738 aa27.45■■□□□ 1.99
LIMS2-201ENST00000324938 DZIP1LQ8IYY4 767 aaKnown RBP27.45■■□□□ 1.98
LIMS2-201ENST00000324938 PCDHB15Q9Y5E8 787 aa27.45■■□□□ 1.98
LIMS2-201ENST00000324938 NFE2L2Q16236 605 aa27.44■■□□□ 1.98
LIMS2-201ENST00000324938 SSH1Q8WYL5 1049 aa27.44■■□□□ 1.98
LIMS2-201ENST00000324938 PTPRUQ92729 1446 aa27.44■■□□□ 1.98
LIMS2-201ENST00000324938 FTSJ3Q8IY81 847 aaKnown RBP27.43■■□□□ 1.98
LIMS2-201ENST00000324938 DDRGK1Q96HY6 314 aa27.43■■□□□ 1.98
LIMS2-201ENST00000324938 HMOX1P09601 288 aa27.41■■□□□ 1.98
LIMS2-201ENST00000324938 CEBPAP49715 358 aaPredicted RBP27.41■■□□□ 1.98
LIMS2-201ENST00000324938 PHACTR3Q96KR7 559 aa27.41■■□□□ 1.98
LIMS2-201ENST00000324938 DIP2AQ14689 1571 aa27.4■■□□□ 1.98
LIMS2-201ENST00000324938 TRIM27P14373 513 aa27.4■■□□□ 1.98
LIMS2-201ENST00000324938 EID1Q9Y6B2 187 aa27.4■■□□□ 1.98
LIMS2-201ENST00000324938 OVOS2A0A0J9YW53 1432 aa27.39■■□□□ 1.98
LIMS2-201ENST00000324938 OVOS2Q6IE36 1432 aa27.39■■□□□ 1.98
LIMS2-201ENST00000324938 KIF16BQ96L93 1317 aa27.38■■□□□ 1.97
LIMS2-201ENST00000324938 PLEKHG3A1L390 1219 aa27.38■■□□□ 1.97
LIMS2-201ENST00000324938 ATF7IPQ6VMQ6 1270 aa27.38■■□□□ 1.97
LIMS2-201ENST00000324938 PTCH1Q13635 1447 aa27.38■■□□□ 1.97
LIMS2-201ENST00000324938 CALD1Q05682 793 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms