RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CAVIN1Q6NZI2 390 aaKnown RBP18.74■□□□□ 0.59
VARS2-201ENST00000321897 API5Q9BZZ5 524 aaKnown RBP18.74■□□□□ 0.59
VARS2-201ENST00000321897 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.59
VARS2-201ENST00000321897 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
VARS2-201ENST00000321897 PRDM10Q9NQV6 1147 aa18.73■□□□□ 0.59
VARS2-201ENST00000321897 GPRASP1Q5JY77 1395 aa18.73■□□□□ 0.59
VARS2-201ENST00000321897 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
VARS2-201ENST00000321897 FANCAO15360 1455 aa18.72■□□□□ 0.59
VARS2-201ENST00000321897 TEFQ10587 303 aa18.72■□□□□ 0.59
VARS2-201ENST00000321897 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
VARS2-201ENST00000321897 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
VARS2-201ENST00000321897 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
VARS2-201ENST00000321897 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
VARS2-201ENST00000321897 MAP4K4O95819 1239 aaPredicted RBP18.71■□□□□ 0.59
VARS2-201ENST00000321897 LRPPRCP42704 1394 aaKnown RBP18.71■□□□□ 0.59
VARS2-201ENST00000321897 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
VARS2-201ENST00000321897 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
VARS2-201ENST00000321897 F6X3S4 739 aa18.71■□□□□ 0.59
VARS2-201ENST00000321897 A2MP01023 1474 aa18.71■□□□□ 0.59
VARS2-201ENST00000321897 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.71■□□□□ 0.59
VARS2-201ENST00000321897 SKOR2Q2VWA4 1001 aaPredicted RBP18.7■□□□□ 0.58
VARS2-201ENST00000321897 SLC52A1Q9NWF4 448 aa18.7■□□□□ 0.58
VARS2-201ENST00000321897 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
VARS2-201ENST00000321897 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
VARS2-201ENST00000321897 GOLGA6L4A6NEF3 574 aa18.7■□□□□ 0.58
VARS2-201ENST00000321897 ST18O60284 1047 aa18.69■□□□□ 0.58
VARS2-201ENST00000321897 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
VARS2-201ENST00000321897 NUDT16Q96DE0 195 aaKnown RBP18.69■□□□□ 0.58
VARS2-201ENST00000321897 ABTB2Q8N961 1025 aa18.69■□□□□ 0.58
VARS2-201ENST00000321897 FYB1O15117 783 aa18.68■□□□□ 0.58
VARS2-201ENST00000321897 DNMT1P26358 1616 aaKnown RBP18.68■□□□□ 0.58
VARS2-201ENST00000321897 TSHZ3Q63HK5 1081 aa18.68■□□□□ 0.58
VARS2-201ENST00000321897 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
VARS2-201ENST00000321897 EXOC6BQ9Y2D4 811 aa18.68■□□□□ 0.58
VARS2-201ENST00000321897 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
VARS2-201ENST00000321897 PTMSP20962 102 aa18.68■□□□□ 0.58
VARS2-201ENST00000321897 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
VARS2-201ENST00000321897 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
VARS2-201ENST00000321897 PSME1Q06323 249 aa18.67■□□□□ 0.58
VARS2-201ENST00000321897 IL1RAPL2Q9NP60 686 aa18.67■□□□□ 0.58
VARS2-201ENST00000321897 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
VARS2-201ENST00000321897 C9orf78Q9NZ63 289 aaPredicted RBP18.66■□□□□ 0.58
VARS2-201ENST00000321897 PLCH2O75038 1416 aa18.65■□□□□ 0.58
VARS2-201ENST00000321897 TPM2P07951 284 aa18.64■□□□□ 0.58
VARS2-201ENST00000321897 TSPYL6Q8N831 410 aa18.64■□□□□ 0.57
VARS2-201ENST00000321897 NEK4P51957 841 aa18.63■□□□□ 0.57
VARS2-201ENST00000321897 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
VARS2-201ENST00000321897 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
VARS2-201ENST00000321897 CCDC61Q9Y6R9 512 aa18.63■□□□□ 0.57
VARS2-201ENST00000321897 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
VARS2-201ENST00000321897 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
VARS2-201ENST00000321897 FOSBP53539 338 aa18.63■□□□□ 0.57
VARS2-201ENST00000321897 FCHSD2O94868 740 aa18.62■□□□□ 0.57
VARS2-201ENST00000321897 PRPF40AO75400 957 aaKnown RBP18.62■□□□□ 0.57
VARS2-201ENST00000321897 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
VARS2-201ENST00000321897 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
VARS2-201ENST00000321897 CDC45O75419 566 aa18.61■□□□□ 0.57
VARS2-201ENST00000321897 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
VARS2-201ENST00000321897 ZHX1Q9UKY1 873 aaPredicted RBP18.61■□□□□ 0.57
VARS2-201ENST00000321897 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
VARS2-201ENST00000321897 UQCRHLA0A096LP55 91 aa18.6■□□□□ 0.57
VARS2-201ENST00000321897 UQCRHP07919 91 aa18.6■□□□□ 0.57
VARS2-201ENST00000321897 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
VARS2-201ENST00000321897 LARP6Q9BRS8 491 aaKnown RBP18.6■□□□□ 0.57
VARS2-201ENST00000321897 HSP90AB2PQ58FF8 381 aa18.59■□□□□ 0.57
VARS2-201ENST00000321897 C1orf141Q5JVX7 400 aa18.59■□□□□ 0.57
VARS2-201ENST00000321897 ZNF771Q7L3S4 317 aaPredicted RBP18.59■□□□□ 0.57
VARS2-201ENST00000321897 ZRSR1Q15695 479 aaKnown RBP18.58■□□□□ 0.57
VARS2-201ENST00000321897 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.57
VARS2-201ENST00000321897 SYAP1Q96A49 352 aaPredicted RBP18.58■□□□□ 0.57
VARS2-201ENST00000321897 TARBP1Q13395 1621 aaKnown RBP18.58■□□□□ 0.57
VARS2-201ENST00000321897 REC8O95072 547 aa18.58■□□□□ 0.56
VARS2-201ENST00000321897 ANXA1P04083 346 aa18.58■□□□□ 0.56
VARS2-201ENST00000321897 RNF123Q5XPI4 1314 aa18.57■□□□□ 0.56
VARS2-201ENST00000321897 UBTFL1P0CB47 393 aaPredicted RBP18.57■□□□□ 0.56
VARS2-201ENST00000321897 CLCN1P35523 988 aa18.57■□□□□ 0.56
VARS2-201ENST00000321897 CCDC27Q2M243 656 aa18.57■□□□□ 0.56
VARS2-201ENST00000321897 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
VARS2-201ENST00000321897 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
VARS2-201ENST00000321897 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
VARS2-201ENST00000321897 UPF3BQ9BZI7 483 aaKnown RBP18.57■□□□□ 0.56
VARS2-201ENST00000321897 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
VARS2-201ENST00000321897 HDGFL1Q5TGJ6 251 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 NLRP2Q9NX02 1062 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 CCDC173Q0VFZ6 552 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
VARS2-201ENST00000321897 SIL1Q9H173 461 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 ATAD2Q6PL18 1390 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
VARS2-201ENST00000321897 ZNF592Q92610 1267 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 VPS37CA5D8V6 355 aaPredicted RBP18.55■□□□□ 0.56
VARS2-201ENST00000321897 GORABQ5T7V8 394 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 ASXL1Q8IXJ9 1541 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 NUP160Q12769 1436 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 UHRF1BP1Q6BDS2 1440 aa18.55■□□□□ 0.56
VARS2-201ENST00000321897 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
VARS2-201ENST00000321897 ZSCAN30Q86W11 494 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms