RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
SH3PXD2A-201ENST00000315994 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
SH3PXD2A-201ENST00000315994 KCNH5Q8NCM2 988 aa15.69■□□□□ 0.1
SH3PXD2A-201ENST00000315994 CHAF1AQ13111 956 aaPredicted RBP15.68■□□□□ 0.1
SH3PXD2A-201ENST00000315994 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
SH3PXD2A-201ENST00000315994 GOLGA6L3A6NEY3 463 aa15.68■□□□□ 0.1
SH3PXD2A-201ENST00000315994 RNF20Q5VTR2 975 aa15.68■□□□□ 0.1
SH3PXD2A-201ENST00000315994 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
SH3PXD2A-201ENST00000315994 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 USP35Q9P2H5 1018 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 BCAR3O75815 825 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 TPM4P67936 248 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 H3BQV1 296 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 IFFO2Q5TF58 517 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 FAM184AQ8NB25 1140 aa15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 NOL10Q9BSC4 688 aaKnown RBP15.67■□□□□ 0.1
SH3PXD2A-201ENST00000315994 NFE2L2Q16236 605 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 HDGFL1Q5TGJ6 251 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 ANO2Q9NQ90 1003 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 PHF14O94880 888 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 VPS37DQ86XT2 251 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 CDC45O75419 566 aa15.66■□□□□ 0.1
SH3PXD2A-201ENST00000315994 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 TRAPPC8Q9Y2L5 1435 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 NSD2O96028 1365 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 CCT4P50991 539 aaKnown RBP15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 SYNE3Q6ZMZ3 975 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 AMOTL1Q8IY63 956 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 CABP4P57796 275 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
SH3PXD2A-201ENST00000315994 TMPOP42166 694 aaKnown RBP15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 TNRQ92752 1358 aa15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SLC4A3P48751 1232 aa15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 CEBPAP49715 358 aaPredicted RBP15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 KIF6Q6ZMV9 814 aa15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 GNAI2P04899 355 aa15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 RALGAPBQ86X10 1494 aa15.64■□□□□ 0.09
SH3PXD2A-201ENST00000315994 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SLFN5Q08AF3 891 aa15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 FOXD4L5Q5VV16 416 aaPredicted RBP15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 FOXD4L4Q8WXT5 416 aaPredicted RBP15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SF3A1Q15459 793 aaKnown RBP15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 PRDM11Q9NQV5 511 aa15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 CPLX2Q6PUV4 134 aaKnown RBP15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 CLASRPQ8N2M8 674 aaKnown RBP15.63■□□□□ 0.09
SH3PXD2A-201ENST00000315994 NEUROD6Q96NK8 337 aa15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 C22orf23Q9BZE7 217 aa15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 AKAP17AQ02040 695 aaKnown RBP15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SURF6O75683 361 aaKnown RBP15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 APPP05067 770 aa15.62■□□□□ 0.09
SH3PXD2A-201ENST00000315994 XPCQ01831 940 aaPredicted RBP15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SKOR2Q2VWA4 1001 aaPredicted RBP15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 RASSF8Q8NHQ8 419 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 MVPQ14764 893 aaKnown RBP15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 NME9Q86XW9 330 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 ERC1Q8IUD2 1116 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
SH3PXD2A-201ENST00000315994 TRDNQ13061 729 aa15.6■□□□□ 0.09
SH3PXD2A-201ENST00000315994 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
SH3PXD2A-201ENST00000315994 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
SH3PXD2A-201ENST00000315994 ABCC11Q96J66 1382 aa15.6■□□□□ 0.09
SH3PXD2A-201ENST00000315994 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
SH3PXD2A-201ENST00000315994 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
SH3PXD2A-201ENST00000315994 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
SH3PXD2A-201ENST00000315994 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
SH3PXD2A-201ENST00000315994 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.09
SH3PXD2A-201ENST00000315994 SF3B2Q13435 895 aaKnown RBP15.58■□□□□ 0.09
SH3PXD2A-201ENST00000315994 DDX54Q8TDD1 881 aaKnown RBP15.58■□□□□ 0.09
SH3PXD2A-201ENST00000315994 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
SH3PXD2A-201ENST00000315994 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.08
SH3PXD2A-201ENST00000315994 CHMP5Q9NZZ3 219 aa15.58■□□□□ 0.08
SH3PXD2A-201ENST00000315994 SAMD9Q5K651 1589 aa15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 DDX49Q9Y6V7 483 aaKnown RBP15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 UHRF1BP1LA0JNW5 1464 aa15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 TRIM34Q9BYJ4 488 aa15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 ZC3H6P61129 1189 aaKnown RBP15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 IFT57Q9NWB7 429 aa15.57■□□□□ 0.08
SH3PXD2A-201ENST00000315994 CPLX1O14810 134 aa15.56■□□□□ 0.08
SH3PXD2A-201ENST00000315994 TRIM29Q14134 588 aa15.56■□□□□ 0.08
SH3PXD2A-201ENST00000315994 ANKRD36BQ8N2N9 1353 aa15.55■□□□□ 0.08
SH3PXD2A-201ENST00000315994 FSD1Q9BTV5 496 aa15.55■□□□□ 0.08
SH3PXD2A-201ENST00000315994 HIP1O00291 1037 aa15.55■□□□□ 0.08
SH3PXD2A-201ENST00000315994 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms