RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
CASP3-201ENST00000308394 ATP7BP35670 1465 aa14.38□□□□□ -0.11
CASP3-201ENST00000308394 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
CASP3-201ENST00000308394 PROSER2Q86WR7 435 aaPredicted RBP14.38□□□□□ -0.11
CASP3-201ENST00000308394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.11
CASP3-201ENST00000308394 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
CASP3-201ENST00000308394 GGNBP2Q9H3C7 697 aa14.36□□□□□ -0.11
CASP3-201ENST00000308394 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
CASP3-201ENST00000308394 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
CASP3-201ENST00000308394 FYB1O15117 783 aa14.35□□□□□ -0.11
CASP3-201ENST00000308394 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
CASP3-201ENST00000308394 NSD2O96028 1365 aa14.34□□□□□ -0.11
CASP3-201ENST00000308394 ACEP12821 1306 aa14.34□□□□□ -0.11
CASP3-201ENST00000308394 CPSF1Q10570 1443 aaKnown RBP14.34□□□□□ -0.11
CASP3-201ENST00000308394 CDK11BP21127 795 aaKnown RBP14.34□□□□□ -0.11
CASP3-201ENST00000308394 USP32Q8NFA0 1604 aa14.33□□□□□ -0.11
CASP3-201ENST00000308394 PLEKHG3A1L390 1219 aa14.33□□□□□ -0.12
CASP3-201ENST00000308394 NGDNQ8NEJ9 315 aaKnown RBP14.33□□□□□ -0.12
CASP3-201ENST00000308394 CDC42BPGQ6DT37 1551 aa14.32□□□□□ -0.12
CASP3-201ENST00000308394 NWD1Q149M9 1564 aa14.32□□□□□ -0.12
CASP3-201ENST00000308394 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
CASP3-201ENST00000308394 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
CASP3-201ENST00000308394 NALCNQ8IZF0 1738 aa14.31□□□□□ -0.12
CASP3-201ENST00000308394 AAMPQ13685 434 aa14.3□□□□□ -0.12
CASP3-201ENST00000308394 STRCQ7RTU9 1775 aa14.3□□□□□ -0.12
CASP3-201ENST00000308394 ANKARQ7Z5J8 1434 aa14.3□□□□□ -0.12
CASP3-201ENST00000308394 NKTRP30414 1462 aaKnown RBP14.3□□□□□ -0.12
CASP3-201ENST00000308394 NME9Q86XW9 330 aa14.29□□□□□ -0.12
CASP3-201ENST00000308394 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
CASP3-201ENST00000308394 MTHFSP49914 203 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 C19orf44Q9H6X5 657 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 ITSN1Q15811 1721 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
CASP3-201ENST00000308394 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 WDR43Q15061 677 aaKnown RBP eCLIP14.28□□□□□ -0.12
CASP3-201ENST00000308394 ESCO1Q5FWF5 840 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 FMN2Q9NZ56 1722 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
CASP3-201ENST00000308394 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.12
CASP3-201ENST00000308394 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.12
CASP3-201ENST00000308394 TTC21BQ7Z4L5 1316 aa14.27□□□□□ -0.13
CASP3-201ENST00000308394 COG3Q96JB2 828 aa14.27□□□□□ -0.13
CASP3-201ENST00000308394 PHF8Q9UPP1 1060 aa14.27□□□□□ -0.13
CASP3-201ENST00000308394 USP6P35125 1406 aa14.27□□□□□ -0.13
CASP3-201ENST00000308394 AKAP12Q02952 1782 aa14.26□□□□□ -0.13
CASP3-201ENST00000308394 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
CASP3-201ENST00000308394 ATF3P18847 181 aa14.26□□□□□ -0.13
CASP3-201ENST00000308394 ZNF335Q9H4Z2 1342 aaPredicted RBP14.25□□□□□ -0.13
CASP3-201ENST00000308394 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 STRCP1A6NGW2 1772 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 CFAP53Q96M91 514 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 ADAMTS8Q9UP79 889 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 KIF20BQ96Q89 1820 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 FBLN1P23142 703 aa14.25□□□□□ -0.13
CASP3-201ENST00000308394 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
CASP3-201ENST00000308394 PPM1GO15355 546 aaPredicted RBP14.23□□□□□ -0.13
CASP3-201ENST00000308394 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
CASP3-201ENST00000308394 PSME1Q06323 249 aa14.22□□□□□ -0.13
CASP3-201ENST00000308394 ANKRD26Q9UPS8 1709 aa14.22□□□□□ -0.13
CASP3-201ENST00000308394 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
CASP3-201ENST00000308394 NCOA3Q9Y6Q9 1424 aa14.21□□□□□ -0.13
CASP3-201ENST00000308394 MSH6P52701 1360 aa14.21□□□□□ -0.13
CASP3-201ENST00000308394 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
CASP3-201ENST00000308394 SSH2Q76I76 1423 aa14.21□□□□□ -0.14
CASP3-201ENST00000308394 FOXO3O43524 673 aa14.2□□□□□ -0.14
CASP3-201ENST00000308394 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
CASP3-201ENST00000308394 SOX12O15370 315 aa14.2□□□□□ -0.14
CASP3-201ENST00000308394 NRKQ7Z2Y5 1582 aa14.2□□□□□ -0.14
CASP3-201ENST00000308394 ABTB2Q8N961 1025 aa14.19□□□□□ -0.14
CASP3-201ENST00000308394 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
CASP3-201ENST00000308394 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
CASP3-201ENST00000308394 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
CASP3-201ENST00000308394 NLRP6P59044 892 aa14.18□□□□□ -0.14
CASP3-201ENST00000308394 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
CASP3-201ENST00000308394 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
CASP3-201ENST00000308394 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
CASP3-201ENST00000308394 EMILIN1Q9Y6C2 1016 aa14.18□□□□□ -0.14
CASP3-201ENST00000308394 IGSF3O75054 1194 aa14.18□□□□□ -0.14
CASP3-201ENST00000308394 RSPH6AQ9H0K4 717 aa14.18□□□□□ -0.14
CASP3-201ENST00000308394 LRRC7Q96NW7 1537 aa14.17□□□□□ -0.14
CASP3-201ENST00000308394 DCCP43146 1447 aa14.17□□□□□ -0.14
CASP3-201ENST00000308394 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
CASP3-201ENST00000308394 BLMP54132 1417 aaPredicted RBP14.16□□□□□ -0.14
CASP3-201ENST00000308394 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
CASP3-201ENST00000308394 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
CASP3-201ENST00000308394 INSRP06213 1382 aa14.16□□□□□ -0.14
CASP3-201ENST00000308394 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
CASP3-201ENST00000308394 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
CASP3-201ENST00000308394 MST1RQ04912 1400 aa14.16□□□□□ -0.14
CASP3-201ENST00000308394 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
CASP3-201ENST00000308394 DIAPH1O60610 1272 aaKnown RBP14.16□□□□□ -0.14
CASP3-201ENST00000308394 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
CASP3-201ENST00000308394 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
CASP3-201ENST00000308394 IRX6P78412 446 aaPredicted RBP14.15□□□□□ -0.14
CASP3-201ENST00000308394 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
CASP3-201ENST00000308394 RBM10P98175 930 aaKnown RBP14.14□□□□□ -0.15
CASP3-201ENST00000308394 KRT28Q7Z3Y7 464 aa14.14□□□□□ -0.15
CASP3-201ENST00000308394 MAP2P11137 1827 aaKnown RBP14.14□□□□□ -0.15
CASP3-201ENST00000308394 USP31Q70CQ4 1352 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms