RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 LTKP29376 864 aa17.61■□□□□ 0.41
SDC2-201ENST00000302190 ARID3AQ99856 593 aa17.61■□□□□ 0.41
SDC2-201ENST00000302190 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
SDC2-201ENST00000302190 TXNDC2Q86VQ3 553 aa17.61■□□□□ 0.41
SDC2-201ENST00000302190 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
SDC2-201ENST00000302190 C22orf23Q9BZE7 217 aa17.61■□□□□ 0.41
SDC2-201ENST00000302190 PLCB2Q00722 1185 aa17.6■□□□□ 0.41
SDC2-201ENST00000302190 L1TD1Q5T7N2 865 aaKnown RBP17.6■□□□□ 0.41
SDC2-201ENST00000302190 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
SDC2-201ENST00000302190 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
SDC2-201ENST00000302190 TNRQ92752 1358 aa17.59■□□□□ 0.41
SDC2-201ENST00000302190 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
SDC2-201ENST00000302190 SEC24BO95487 1268 aa17.58■□□□□ 0.41
SDC2-201ENST00000302190 PRAM1Q96QH2 718 aa17.58■□□□□ 0.41
SDC2-201ENST00000302190 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.41
SDC2-201ENST00000302190 PDE3AQ14432 1141 aa17.58■□□□□ 0.4
SDC2-201ENST00000302190 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.4
SDC2-201ENST00000302190 NECTIN2Q92692 538 aa17.58■□□□□ 0.4
SDC2-201ENST00000302190 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
SDC2-201ENST00000302190 RNF123Q5XPI4 1314 aa17.57■□□□□ 0.4
SDC2-201ENST00000302190 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
SDC2-201ENST00000302190 LRPPRCP42704 1394 aaKnown RBP17.56■□□□□ 0.4
SDC2-201ENST00000302190 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
SDC2-201ENST00000302190 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
SDC2-201ENST00000302190 MADDQ8WXG6 1647 aa17.55■□□□□ 0.4
SDC2-201ENST00000302190 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
SDC2-201ENST00000302190 C8orf34Q49A92 452 aa17.55■□□□□ 0.4
SDC2-201ENST00000302190 LTV1Q96GA3 475 aaPredicted RBP17.55■□□□□ 0.4
SDC2-201ENST00000302190 CARD14Q9BXL6 1004 aa17.55■□□□□ 0.4
SDC2-201ENST00000302190 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
SDC2-201ENST00000302190 PCDHB15Q9Y5E8 787 aa17.54■□□□□ 0.4
SDC2-201ENST00000302190 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
SDC2-201ENST00000302190 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
SDC2-201ENST00000302190 PIK3C2BO00750 1634 aa17.54■□□□□ 0.4
SDC2-201ENST00000302190 HSPA2P54652 639 aa17.54■□□□□ 0.4
SDC2-201ENST00000302190 CASC1Q6TDU7 716 aa17.54■□□□□ 0.4
SDC2-201ENST00000302190 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
SDC2-201ENST00000302190 PTMAP06454 111 aaKnown RBP17.53■□□□□ 0.4
SDC2-201ENST00000302190 RLBP1P12271 317 aa17.53■□□□□ 0.4
SDC2-201ENST00000302190 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
SDC2-201ENST00000302190 HSP90AA2PQ14568 343 aaPredicted RBP17.53■□□□□ 0.4
SDC2-201ENST00000302190 AGLP35573 1532 aa17.52■□□□□ 0.4
SDC2-201ENST00000302190 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
SDC2-201ENST00000302190 GPRASP1Q5JY77 1395 aa17.52■□□□□ 0.39
SDC2-201ENST00000302190 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
SDC2-201ENST00000302190 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
SDC2-201ENST00000302190 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
SDC2-201ENST00000302190 FAM43AQ8N2R8 423 aa17.5■□□□□ 0.39
SDC2-201ENST00000302190 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
SDC2-201ENST00000302190 A2ML1A8K2U0 1454 aa17.49■□□□□ 0.39
SDC2-201ENST00000302190 MVPQ14764 893 aaKnown RBP17.49■□□□□ 0.39
SDC2-201ENST00000302190 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
SDC2-201ENST00000302190 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
SDC2-201ENST00000302190 RTF1Q92541 710 aaKnown RBP17.49■□□□□ 0.39
SDC2-201ENST00000302190 METP08581 1390 aa17.48■□□□□ 0.39
SDC2-201ENST00000302190 TRIM6-TRIM34B2RNG4 842 aa17.48■□□□□ 0.39
SDC2-201ENST00000302190 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
SDC2-201ENST00000302190 SCAF11Q99590 1463 aaKnown RBP17.48■□□□□ 0.39
SDC2-201ENST00000302190 DNTTIP2Q5QJE6 756 aaKnown RBP17.48■□□□□ 0.39
SDC2-201ENST00000302190 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
SDC2-201ENST00000302190 RPGRIP1LQ68CZ1 1315 aa17.48■□□□□ 0.39
SDC2-201ENST00000302190 DDX49Q9Y6V7 483 aaKnown RBP17.48■□□□□ 0.39
SDC2-201ENST00000302190 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
SDC2-201ENST00000302190 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
SDC2-201ENST00000302190 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
SDC2-201ENST00000302190 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.39
SDC2-201ENST00000302190 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
SDC2-201ENST00000302190 CHMP4BQ9H444 224 aaKnown RBP17.46■□□□□ 0.39
SDC2-201ENST00000302190 TRAK2O60296 914 aa17.46■□□□□ 0.39
SDC2-201ENST00000302190 DCTN1Q14203 1278 aa17.46■□□□□ 0.39
SDC2-201ENST00000302190 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
SDC2-201ENST00000302190 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
SDC2-201ENST00000302190 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
SDC2-201ENST00000302190 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
SDC2-201ENST00000302190 ZC3H13Q5T200 1668 aaKnown RBP17.45■□□□□ 0.38
SDC2-201ENST00000302190 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
SDC2-201ENST00000302190 PPLO60437 1756 aa17.44■□□□□ 0.38
SDC2-201ENST00000302190 RIMS1Q86UR5 1692 aaKnown RBP17.44■□□□□ 0.38
SDC2-201ENST00000302190 RRS1Q15050 365 aaKnown RBP17.44■□□□□ 0.38
SDC2-201ENST00000302190 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
SDC2-201ENST00000302190 FER1L4A9Z1Z3 1794 aa17.43■□□□□ 0.38
SDC2-201ENST00000302190 TRIM27P14373 513 aa17.43■□□□□ 0.38
SDC2-201ENST00000302190 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
SDC2-201ENST00000302190 COG3Q96JB2 828 aa17.43■□□□□ 0.38
SDC2-201ENST00000302190 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
SDC2-201ENST00000302190 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
SDC2-201ENST00000302190 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
SDC2-201ENST00000302190 THEMISQ8N1K5 641 aaPredicted RBP17.41■□□□□ 0.38
SDC2-201ENST00000302190 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
SDC2-201ENST00000302190 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
SDC2-201ENST00000302190 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
SDC2-201ENST00000302190 C3P01024 1663 aa17.41■□□□□ 0.38
SDC2-201ENST00000302190 MSNP26038 577 aaKnown RBP17.4■□□□□ 0.38
SDC2-201ENST00000302190 MYOM2P54296 1465 aa17.4■□□□□ 0.38
SDC2-201ENST00000302190 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
SDC2-201ENST00000302190 SPATA31D1Q6ZQQ2 1576 aa17.39■□□□□ 0.38
SDC2-201ENST00000302190 KCNJ4P48050 445 aa17.39■□□□□ 0.37
SDC2-201ENST00000302190 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
SDC2-201ENST00000302190 AMOTL2Q9Y2J4 779 aa17.38■□□□□ 0.37
SDC2-201ENST00000302190 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms